RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 NEFMP07197 916 aa18.69■□□□□ 0.58
USP39-207ENST00000450066 HMOX1P09601 288 aa18.69■□□□□ 0.58
USP39-207ENST00000450066 AMPHP49418 695 aa18.69■□□□□ 0.58
USP39-207ENST00000450066 SPINK5Q9NQ38 1064 aaPredicted RBP18.69■□□□□ 0.58
USP39-207ENST00000450066 XPCQ01831 940 aaPredicted RBP18.68■□□□□ 0.58
USP39-207ENST00000450066 ERICH6BQ5W0A0 696 aa18.68■□□□□ 0.58
USP39-207ENST00000450066 KCNH5Q8NCM2 988 aa18.68■□□□□ 0.58
USP39-207ENST00000450066 NFAT5O94916 1531 aa18.66■□□□□ 0.58
USP39-207ENST00000450066 RTL1A6NKG5 1358 aa18.65■□□□□ 0.58
USP39-207ENST00000450066 RGPD1P0DJD0 1748 aa18.65■□□□□ 0.58
USP39-207ENST00000450066 IRX6P78412 446 aaPredicted RBP18.65■□□□□ 0.58
USP39-207ENST00000450066 TRIM35Q9UPQ4 493 aa18.65■□□□□ 0.58
USP39-207ENST00000450066 NPHP3Q7Z494 1330 aa18.65■□□□□ 0.58
USP39-207ENST00000450066 HOXC9P31274 260 aa18.64■□□□□ 0.57
USP39-207ENST00000450066 RIPK4P57078 832 aa18.64■□□□□ 0.57
USP39-207ENST00000450066 PHACTR3Q96KR7 559 aa18.64■□□□□ 0.57
USP39-207ENST00000450066 SLIT3O75094 1523 aa18.64■□□□□ 0.57
USP39-207ENST00000450066 ARHGEF10O15013 1369 aa18.63■□□□□ 0.57
USP39-207ENST00000450066 USP19O94966 1318 aa18.63■□□□□ 0.57
USP39-207ENST00000450066 ALS2Q96Q42 1657 aa18.62■□□□□ 0.57
USP39-207ENST00000450066 NFE2L2Q16236 605 aa18.62■□□□□ 0.57
USP39-207ENST00000450066 SULT6B1Q6IMI4 303 aa18.62■□□□□ 0.57
USP39-207ENST00000450066 GCP02774 474 aa18.62■□□□□ 0.57
USP39-207ENST00000450066 RRP1P56182 461 aaKnown RBP18.62■□□□□ 0.57
USP39-207ENST00000450066 SLAIN2Q9P270 581 aa18.62■□□□□ 0.57
USP39-207ENST00000450066 LTN1O94822 1766 aa18.61■□□□□ 0.57
USP39-207ENST00000450066 LMOD2Q6P5Q4 547 aa18.61■□□□□ 0.57
USP39-207ENST00000450066 PHRF1Q9P1Y6 1649 aaKnown RBP18.61■□□□□ 0.57
USP39-207ENST00000450066 IL16Q14005 1332 aa18.61■□□□□ 0.57
USP39-207ENST00000450066 BRINP3Q76B58 766 aa18.61■□□□□ 0.57
USP39-207ENST00000450066 AEBP1Q8IUX7 1158 aa18.61■□□□□ 0.57
USP39-207ENST00000450066 IP6K1Q92551 441 aa18.61■□□□□ 0.57
USP39-207ENST00000450066 MYH16Q9H6N6 1097 aa18.6■□□□□ 0.57
USP39-207ENST00000450066 IGSF1Q8N6C5 1336 aa18.6■□□□□ 0.57
USP39-207ENST00000450066 PXDNQ92626 1479 aa18.6■□□□□ 0.57
USP39-207ENST00000450066 DDX17Q92841 729 aaKnown RBP18.59■□□□□ 0.57
USP39-207ENST00000450066 KDRP35968 1356 aa18.59■□□□□ 0.57
USP39-207ENST00000450066 EYA1Q99502 592 aa18.58■□□□□ 0.57
USP39-207ENST00000450066 ARHGEF25Q86VW2 580 aa18.58■□□□□ 0.56
USP39-207ENST00000450066 TNS3Q68CZ2 1445 aa18.57■□□□□ 0.56
USP39-207ENST00000450066 LMOD3Q0VAK6 560 aa18.56■□□□□ 0.56
USP39-207ENST00000450066 SPATA31A3Q5VYP0 1347 aa18.55■□□□□ 0.56
USP39-207ENST00000450066 MED1Q15648 1581 aaPredicted RBP18.55■□□□□ 0.56
USP39-207ENST00000450066 CALD1Q05682 793 aaKnown RBP18.54■□□□□ 0.56
USP39-207ENST00000450066 PPP4R2Q9NY27 417 aa18.54■□□□□ 0.56
USP39-207ENST00000450066 FANCIQ9NVI1 1328 aa18.52■□□□□ 0.56
USP39-207ENST00000450066 LTV1Q96GA3 475 aaPredicted RBP18.52■□□□□ 0.56
USP39-207ENST00000450066 SOS2Q07890 1332 aaPredicted RBP18.52■□□□□ 0.56
USP39-207ENST00000450066 DLG5Q8TDM6 1919 aa18.51■□□□□ 0.55
USP39-207ENST00000450066 ZBTB7CA1YPR0 619 aa18.51■□□□□ 0.55
USP39-207ENST00000450066 PLEKHG5O94827 1062 aa18.51■□□□□ 0.55
USP39-207ENST00000450066 CT47B1P0C2W7 299 aaPredicted RBP18.5■□□□□ 0.55
USP39-207ENST00000450066 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.5■□□□□ 0.55
USP39-207ENST00000450066 TSR2Q969E8 191 aaKnown RBP18.5■□□□□ 0.55
USP39-207ENST00000450066 PLIN1O60240 522 aa18.49■□□□□ 0.55
USP39-207ENST00000450066 LTBP4Q8N2S1 1624 aa18.48■□□□□ 0.55
USP39-207ENST00000450066 IFT57Q9NWB7 429 aa18.48■□□□□ 0.55
USP39-207ENST00000450066 CRYBG1Q9Y4K1 1723 aa18.47■□□□□ 0.55
USP39-207ENST00000450066 ZC3H6P61129 1189 aaKnown RBP18.47■□□□□ 0.55
USP39-207ENST00000450066 GNAI1P63096 354 aa18.47■□□□□ 0.55
USP39-207ENST00000450066 MTHFSDQ2M296 383 aaKnown RBP18.47■□□□□ 0.55
USP39-207ENST00000450066 NBPF6Q5VWK0 638 aa18.47■□□□□ 0.55
USP39-207ENST00000450066 GAS2L2Q8NHY3 880 aa18.47■□□□□ 0.55
USP39-207ENST00000450066 NBPF4Q96M43 638 aa18.47■□□□□ 0.55
USP39-207ENST00000450066 THUMPD2Q9BTF0 503 aaKnown RBP18.47■□□□□ 0.55
USP39-207ENST00000450066 BCAR3O75815 825 aa18.46■□□□□ 0.55
USP39-207ENST00000450066 ZNF853P0CG23 659 aa18.46■□□□□ 0.55
USP39-207ENST00000450066 RARSP54136 660 aaKnown RBP18.46■□□□□ 0.55
USP39-207ENST00000450066 AXIN2Q9Y2T1 843 aa18.46■□□□□ 0.55
USP39-207ENST00000450066 NHSL1Q5SYE7 1610 aa18.46■□□□□ 0.55
USP39-207ENST00000450066 FAM83GA6ND36 823 aa18.46■□□□□ 0.55
USP39-207ENST00000450066 EXOSC9Q06265 439 aaKnown RBP18.46■□□□□ 0.55
USP39-207ENST00000450066 ANKRD24Q8TF21 1146 aa18.46■□□□□ 0.55
USP39-207ENST00000450066 ABCC6O95255 1503 aa18.45■□□□□ 0.54
USP39-207ENST00000450066 CABLES1Q8TDN4 633 aa18.45■□□□□ 0.54
USP39-207ENST00000450066 CFAP44Q96MT7 982 aa18.45■□□□□ 0.54
USP39-207ENST00000450066 CPDO75976 1380 aa18.45■□□□□ 0.54
USP39-207ENST00000450066 NCAPD2Q15021 1401 aa18.45■□□□□ 0.54
USP39-207ENST00000450066 USHBP1Q8N6Y0 703 aa18.44■□□□□ 0.54
USP39-207ENST00000450066 DCTN1Q14203 1278 aa18.43■□□□□ 0.54
USP39-207ENST00000450066 LAS1LQ9Y4W2 734 aaKnown RBP18.43■□□□□ 0.54
USP39-207ENST00000450066 HTATSF1O43719 755 aaKnown RBP18.43■□□□□ 0.54
USP39-207ENST00000450066 EXOC6Q8TAG9 804 aa18.43■□□□□ 0.54
USP39-207ENST00000450066 LRRC59Q96AG4 307 aaKnown RBP18.43■□□□□ 0.54
USP39-207ENST00000450066 ERBB3P21860 1342 aa18.42■□□□□ 0.54
USP39-207ENST00000450066 CAMTA1Q9Y6Y1 1673 aa18.42■□□□□ 0.54
USP39-207ENST00000450066 COL18A1P39060 1754 aa18.42■□□□□ 0.54
USP39-207ENST00000450066 C20orf194Q5TEA3 1177 aa18.42■□□□□ 0.54
USP39-207ENST00000450066 MCM10Q7L590 875 aa18.42■□□□□ 0.54
USP39-207ENST00000450066 RTF1Q92541 710 aaKnown RBP18.42■□□□□ 0.54
USP39-207ENST00000450066 MBIPQ9NS73 344 aa18.42■□□□□ 0.54
USP39-207ENST00000450066 RGPD2P0DJD1 1756 aa18.41■□□□□ 0.54
USP39-207ENST00000450066 KIAA0232Q92628 1395 aa18.4■□□□□ 0.54
USP39-207ENST00000450066 RGPD5Q99666 1765 aa18.4■□□□□ 0.54
USP39-207ENST00000450066 PELP1Q8IZL8 1130 aaKnown RBP18.4■□□□□ 0.54
USP39-207ENST00000450066 ZNF428Q96B54 188 aa18.4■□□□□ 0.54
USP39-207ENST00000450066 GNAT3A8MTJ3 354 aa18.39■□□□□ 0.53
USP39-207ENST00000450066 B4GALNT3Q6L9W6 998 aa18.39■□□□□ 0.53
USP39-207ENST00000450066 CRBNQ96SW2 442 aa18.39■□□□□ 0.53
USP39-207ENST00000450066 CRB1P82279 1406 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms