RNA–Protein interactions for RNA: ENST00000449234.1

RFX3-208, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-208ENST00000449234 HAP1P54257 671 aaPredicted RBP14.54□□□□□ -0.08
RFX3-208ENST00000449234 GSE1Q14687 1217 aa14.54□□□□□ -0.08
RFX3-208ENST00000449234 TBC1D32Q96NH3 1257 aa14.54□□□□□ -0.08
RFX3-208ENST00000449234 ZBTB40Q9NUA8 1239 aa14.54□□□□□ -0.08
RFX3-208ENST00000449234 IFT57Q9NWB7 429 aa14.54□□□□□ -0.08
RFX3-208ENST00000449234 SETD1AO15047 1707 aaKnown RBP14.54□□□□□ -0.08
RFX3-208ENST00000449234 KIF24Q5T7B8 1368 aa14.53□□□□□ -0.08
RFX3-208ENST00000449234 CYB5RLQ6IPT4 315 aa14.53□□□□□ -0.08
RFX3-208ENST00000449234 NOB1Q9ULX3 412 aaKnown RBP14.53□□□□□ -0.08
RFX3-208ENST00000449234 KNDC1Q76NI1 1749 aa14.52□□□□□ -0.08
RFX3-208ENST00000449234 CDK12Q9NYV4 1490 aaPredicted RBP14.52□□□□□ -0.08
RFX3-208ENST00000449234 PIK3R4Q99570 1358 aa14.52□□□□□ -0.08
RFX3-208ENST00000449234 ZNF853P0CG23 659 aa14.52□□□□□ -0.09
RFX3-208ENST00000449234 TSR2Q969E8 191 aaKnown RBP14.52□□□□□ -0.09
RFX3-208ENST00000449234 CCDC61Q9Y6R9 512 aa14.52□□□□□ -0.09
RFX3-208ENST00000449234 IL13P35225 146 aa14.51□□□□□ -0.09
RFX3-208ENST00000449234 CFAP44Q96MT7 982 aa14.51□□□□□ -0.09
RFX3-208ENST00000449234 TNNQ9UQP3 1299 aa14.51□□□□□ -0.09
RFX3-208ENST00000449234 PRKAR2BP31323 418 aa14.5□□□□□ -0.09
RFX3-208ENST00000449234 GCC1Q96CN9 775 aa14.5□□□□□ -0.09
RFX3-208ENST00000449234 BCL2L13Q9BXK5 485 aa14.5□□□□□ -0.09
RFX3-208ENST00000449234 RIMBP3CA6NJZ7 1639 aa14.49□□□□□ -0.09
RFX3-208ENST00000449234 RIMBP3BA6NNM3 1639 aa14.49□□□□□ -0.09
RFX3-208ENST00000449234 RIMBP3Q9UFD9 1639 aa14.49□□□□□ -0.09
RFX3-208ENST00000449234 VAMP4O75379 141 aa14.49□□□□□ -0.09
RFX3-208ENST00000449234 NUDT16Q96DE0 195 aaKnown RBP14.49□□□□□ -0.09
RFX3-208ENST00000449234 COG3Q96JB2 828 aa14.49□□□□□ -0.09
RFX3-208ENST00000449234 ESF1Q9H501 851 aaKnown RBP14.49□□□□□ -0.09
RFX3-208ENST00000449234 SEC24BO95487 1268 aa14.48□□□□□ -0.09
RFX3-208ENST00000449234 SLC4A3P48751 1232 aa14.48□□□□□ -0.09
RFX3-208ENST00000449234 NUCB1Q02818 461 aa14.48□□□□□ -0.09
RFX3-208ENST00000449234 WAPLQ7Z5K2 1190 aa14.48□□□□□ -0.09
RFX3-208ENST00000449234 ITPRIPQ8IWB1 547 aa14.48□□□□□ -0.09
RFX3-208ENST00000449234 TMEM57Q8N5G2 664 aa14.48□□□□□ -0.09
RFX3-208ENST00000449234 MRPL50Q8N5N7 158 aaKnown RBP14.48□□□□□ -0.09
RFX3-208ENST00000449234 API5Q9BZZ5 524 aaKnown RBP14.48□□□□□ -0.09
RFX3-208ENST00000449234 CPS1P31327 1500 aa14.47□□□□□ -0.09
RFX3-208ENST00000449234 LRRC7Q96NW7 1537 aa14.47□□□□□ -0.09
RFX3-208ENST00000449234 PTCH1Q13635 1447 aa14.47□□□□□ -0.09
RFX3-208ENST00000449234 MAP2P11137 1827 aaKnown RBP14.46□□□□□ -0.09
RFX3-208ENST00000449234 NRXN3Q9Y4C0 1643 aa14.46□□□□□ -0.09
RFX3-208ENST00000449234 PLEKHG3A1L390 1219 aa14.46□□□□□ -0.09
RFX3-208ENST00000449234 REM2Q8IYK8 340 aaPredicted RBP14.46□□□□□ -0.09
RFX3-208ENST00000449234 SSUH2Q9Y2M2 353 aa14.46□□□□□ -0.09
RFX3-208ENST00000449234 ZBTB7BO15156 539 aaPredicted RBP14.45□□□□□ -0.1
RFX3-208ENST00000449234 MON2Q7Z3U7 1717 aa14.45□□□□□ -0.1
RFX3-208ENST00000449234 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.45□□□□□ -0.1
RFX3-208ENST00000449234 C22orf23Q9BZE7 217 aa14.44□□□□□ -0.1
RFX3-208ENST00000449234 ANTXR1Q9H6X2 564 aa14.44□□□□□ -0.1
RFX3-208ENST00000449234 TNRQ92752 1358 aa14.44□□□□□ -0.1
RFX3-208ENST00000449234 AKAP12Q02952 1782 aa14.43□□□□□ -0.1
RFX3-208ENST00000449234 CHD1LQ86WJ1 897 aa14.43□□□□□ -0.1
RFX3-208ENST00000449234 METP08581 1390 aa14.43□□□□□ -0.1
RFX3-208ENST00000449234 TMEM2Q9UHN6 1383 aa14.43□□□□□ -0.1
RFX3-208ENST00000449234 ABCC4O15439 1325 aa14.42□□□□□ -0.1
RFX3-208ENST00000449234 RBM25P49756 843 aaKnown RBP14.42□□□□□ -0.1
RFX3-208ENST00000449234 BMP2KLQ5H9B9 411 aa14.42□□□□□ -0.1
RFX3-208ENST00000449234 SNX21Q969T3 373 aa14.42□□□□□ -0.1
RFX3-208ENST00000449234 PHACTR3Q96KR7 559 aa14.42□□□□□ -0.1
RFX3-208ENST00000449234 TBC1D2Q9BYX2 928 aa14.41□□□□□ -0.1
RFX3-208ENST00000449234 KIAA0232Q92628 1395 aa14.41□□□□□ -0.1
RFX3-208ENST00000449234 C3P01024 1663 aa14.41□□□□□ -0.1
RFX3-208ENST00000449234 PLEKHG1Q9ULL1 1385 aa14.4□□□□□ -0.1
RFX3-208ENST00000449234 FRAT2O75474 233 aaPredicted RBP14.4□□□□□ -0.1
RFX3-208ENST00000449234 TWISTNBQ3B726 338 aaPredicted RBP14.4□□□□□ -0.1
RFX3-208ENST00000449234 TXNDC2Q86VQ3 553 aa14.4□□□□□ -0.1
RFX3-208ENST00000449234 NME9Q86XW9 330 aa14.4□□□□□ -0.1
RFX3-208ENST00000449234 CHMP5Q9NZZ3 219 aa14.4□□□□□ -0.1
RFX3-208ENST00000449234 EMILIN1Q9Y6C2 1016 aa14.4□□□□□ -0.1
RFX3-208ENST00000449234 TTC21BQ7Z4L5 1316 aa14.4□□□□□ -0.1
RFX3-208ENST00000449234 CHRDL2Q6WN34 429 aa14.39□□□□□ -0.11
RFX3-208ENST00000449234 MBIPQ9NS73 344 aa14.39□□□□□ -0.11
RFX3-208ENST00000449234 TTC21AQ8NDW8 1320 aa14.39□□□□□ -0.11
RFX3-208ENST00000449234 ITSN1Q15811 1721 aa14.38□□□□□ -0.11
RFX3-208ENST00000449234 USP31Q70CQ4 1352 aa14.38□□□□□ -0.11
RFX3-208ENST00000449234 INTS3Q68E01 1043 aaKnown RBP14.38□□□□□ -0.11
RFX3-208ENST00000449234 NRKQ7Z2Y5 1582 aa14.38□□□□□ -0.11
RFX3-208ENST00000449234 CHL1O00533 1208 aa14.37□□□□□ -0.11
RFX3-208ENST00000449234 HMOX1P09601 288 aa14.37□□□□□ -0.11
RFX3-208ENST00000449234 RPAP2Q8IXW5 612 aaPredicted RBP14.37□□□□□ -0.11
RFX3-208ENST00000449234 CIZ1Q9ULV3 898 aaPredicted RBP14.37□□□□□ -0.11
RFX3-208ENST00000449234 TSPOAP1O95153 1857 aa14.37□□□□□ -0.11
RFX3-208ENST00000449234 ADAMTS13Q76LX8 1427 aa14.36□□□□□ -0.11
RFX3-208ENST00000449234 PTMSP20962 102 aa14.36□□□□□ -0.11
RFX3-208ENST00000449234 L1TD1Q5T7N2 865 aaKnown RBP14.36□□□□□ -0.11
RFX3-208ENST00000449234 PTPRCP08575 1304 aa14.36□□□□□ -0.11
RFX3-208ENST00000449234 HTATSF1O43719 755 aaKnown RBP14.35□□□□□ -0.11
RFX3-208ENST00000449234 POTEHQ6S545 545 aa14.35□□□□□ -0.11
RFX3-208ENST00000449234 HSCBQ8IWL3 235 aa14.35□□□□□ -0.11
RFX3-208ENST00000449234 TBX22Q9Y458 520 aa14.35□□□□□ -0.11
RFX3-208ENST00000449234 SOS1Q07889 1333 aaPredicted RBP14.35□□□□□ -0.11
RFX3-208ENST00000449234 UBR1Q8IWV7 1749 aa14.35□□□□□ -0.11
RFX3-208ENST00000449234 OVOS2A0A0J9YW53 1432 aa14.34□□□□□ -0.11
RFX3-208ENST00000449234 OVOS2Q6IE36 1432 aa14.34□□□□□ -0.11
RFX3-208ENST00000449234 MLECQ14165 292 aa14.34□□□□□ -0.11
RFX3-208ENST00000449234 DCTPP1Q9H773 170 aa14.34□□□□□ -0.11
RFX3-208ENST00000449234 PRR36Q9H6K5 1346 aa14.34□□□□□ -0.11
RFX3-208ENST00000449234 SSH2Q76I76 1423 aa14.33□□□□□ -0.11
RFX3-208ENST00000449234 MFAP1P55081 439 aaKnown RBP14.33□□□□□ -0.12
RFX3-208ENST00000449234 EIF4A2Q14240 407 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms