RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 NGDNQ8NEJ9 315 aaKnown RBP13.83□□□□□ -0.2
VIPAS39-203ENST00000448935 MAPK8IP3Q9UPT6 1336 aa13.83□□□□□ -0.2
VIPAS39-203ENST00000448935 NEFMP07197 916 aa13.82□□□□□ -0.2
VIPAS39-203ENST00000448935 WDR63Q8IWG1 891 aa13.82□□□□□ -0.2
VIPAS39-203ENST00000448935 OVOS2A0A0J9YW53 1432 aa13.82□□□□□ -0.2
VIPAS39-203ENST00000448935 OVOS2Q6IE36 1432 aa13.82□□□□□ -0.2
VIPAS39-203ENST00000448935 SSH2Q76I76 1423 aa13.82□□□□□ -0.2
VIPAS39-203ENST00000448935 NUTM2FA1L443 756 aa13.82□□□□□ -0.2
VIPAS39-203ENST00000448935 NBR1Q14596 966 aa13.82□□□□□ -0.2
VIPAS39-203ENST00000448935 WWC1Q8IX03 1113 aa13.82□□□□□ -0.2
VIPAS39-203ENST00000448935 ADGRL3Q9HAR2 1447 aa13.82□□□□□ -0.2
VIPAS39-203ENST00000448935 FCHSD2O94868 740 aa13.81□□□□□ -0.2
VIPAS39-203ENST00000448935 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.8□□□□□ -0.2
VIPAS39-203ENST00000448935 USP31Q70CQ4 1352 aa13.79□□□□□ -0.2
VIPAS39-203ENST00000448935 PPM1GO15355 546 aaPredicted RBP13.79□□□□□ -0.2
VIPAS39-203ENST00000448935 PLEKHF1Q96S99 279 aa13.79□□□□□ -0.2
VIPAS39-203ENST00000448935 LRRC7Q96NW7 1537 aa13.79□□□□□ -0.2
VIPAS39-203ENST00000448935 DSG3P32926 999 aa13.79□□□□□ -0.2
VIPAS39-203ENST00000448935 HS6ST3Q8IZP7 471 aa13.79□□□□□ -0.2
VIPAS39-203ENST00000448935 PMFBP1Q8TBY8 1022 aa13.79□□□□□ -0.2
VIPAS39-203ENST00000448935 USP54Q70EL1 1684 aa13.78□□□□□ -0.2
VIPAS39-203ENST00000448935 ZRANB1Q9UGI0 708 aa13.78□□□□□ -0.2
VIPAS39-203ENST00000448935 NEUROD2Q15784 382 aa13.77□□□□□ -0.21
VIPAS39-203ENST00000448935 EMILIN1Q9Y6C2 1016 aa13.77□□□□□ -0.21
VIPAS39-203ENST00000448935 MYH16Q9H6N6 1097 aa13.76□□□□□ -0.21
VIPAS39-203ENST00000448935 PHF8Q9UPP1 1060 aa13.76□□□□□ -0.21
VIPAS39-203ENST00000448935 PIK3C2AO00443 1686 aa13.75□□□□□ -0.21
VIPAS39-203ENST00000448935 IL13P35225 146 aa13.75□□□□□ -0.21
VIPAS39-203ENST00000448935 TMPOP42166 694 aaKnown RBP13.75□□□□□ -0.21
VIPAS39-203ENST00000448935 C14orf37Q86TY3 774 aa13.75□□□□□ -0.21
VIPAS39-203ENST00000448935 RRP7AQ9Y3A4 280 aaKnown RBP13.75□□□□□ -0.21
VIPAS39-203ENST00000448935 IL16Q14005 1332 aa13.74□□□□□ -0.21
VIPAS39-203ENST00000448935 RRS1Q15050 365 aaKnown RBP13.74□□□□□ -0.21
VIPAS39-203ENST00000448935 RSPH6AQ9H0K4 717 aa13.74□□□□□ -0.21
VIPAS39-203ENST00000448935 NCOA3Q9Y6Q9 1424 aa13.74□□□□□ -0.21
VIPAS39-203ENST00000448935 KIF24Q5T7B8 1368 aa13.74□□□□□ -0.21
VIPAS39-203ENST00000448935 PROSER2Q86WR7 435 aaPredicted RBP13.73□□□□□ -0.21
VIPAS39-203ENST00000448935 CT47B1P0C2W7 299 aaPredicted RBP13.72□□□□□ -0.21
VIPAS39-203ENST00000448935 FBLN1P23142 703 aa13.72□□□□□ -0.21
VIPAS39-203ENST00000448935 PRKAR2BP31323 418 aa13.72□□□□□ -0.21
VIPAS39-203ENST00000448935 RIPK4P57078 832 aa13.72□□□□□ -0.21
VIPAS39-203ENST00000448935 CCDC136Q96JN2 1154 aa13.72□□□□□ -0.21
VIPAS39-203ENST00000448935 KIF1AQ12756 1690 aa13.72□□□□□ -0.21
VIPAS39-203ENST00000448935 CALD1Q05682 793 aaKnown RBP13.72□□□□□ -0.21
VIPAS39-203ENST00000448935 SBNO1A3KN83 1393 aa13.71□□□□□ -0.21
VIPAS39-203ENST00000448935 FLT4P35916 1363 aa13.71□□□□□ -0.21
VIPAS39-203ENST00000448935 NLRP6P59044 892 aa13.71□□□□□ -0.22
VIPAS39-203ENST00000448935 LMOD3Q0VAK6 560 aa13.71□□□□□ -0.22
VIPAS39-203ENST00000448935 NFE2L2Q16236 605 aa13.7□□□□□ -0.22
VIPAS39-203ENST00000448935 ESCO1Q5FWF5 840 aa13.7□□□□□ -0.22
VIPAS39-203ENST00000448935 B4GALNT3Q6L9W6 998 aa13.7□□□□□ -0.22
VIPAS39-203ENST00000448935 PEAK1Q9H792 1746 aa13.7□□□□□ -0.22
VIPAS39-203ENST00000448935 PSME1Q06323 249 aa13.69□□□□□ -0.22
VIPAS39-203ENST00000448935 ABTB2Q8N961 1025 aa13.69□□□□□ -0.22
VIPAS39-203ENST00000448935 C19orf44Q9H6X5 657 aa13.69□□□□□ -0.22
VIPAS39-203ENST00000448935 TRIM35Q9UPQ4 493 aa13.69□□□□□ -0.22
VIPAS39-203ENST00000448935 DCCP43146 1447 aa13.69□□□□□ -0.22
VIPAS39-203ENST00000448935 RGPD1P0DJD0 1748 aa13.69□□□□□ -0.22
VIPAS39-203ENST00000448935 MARF1Q9Y4F3 1742 aaKnown RBP13.69□□□□□ -0.22
VIPAS39-203ENST00000448935 PAK3O75914 559 aaPredicted RBP13.68□□□□□ -0.22
VIPAS39-203ENST00000448935 HMOX1P09601 288 aa13.68□□□□□ -0.22
VIPAS39-203ENST00000448935 EIF4A2Q14240 407 aaKnown RBP13.68□□□□□ -0.22
VIPAS39-203ENST00000448935 MAP3K19Q56UN5 1328 aa13.68□□□□□ -0.22
VIPAS39-203ENST00000448935 AMPHP49418 695 aa13.68□□□□□ -0.22
VIPAS39-203ENST00000448935 EXOC6Q8TAG9 804 aa13.68□□□□□ -0.22
VIPAS39-203ENST00000448935 ARHGEF10O15013 1369 aa13.67□□□□□ -0.22
VIPAS39-203ENST00000448935 PLIN1O60240 522 aa13.67□□□□□ -0.22
VIPAS39-203ENST00000448935 RBM33Q96EV2 1170 aaKnown RBP13.67□□□□□ -0.22
VIPAS39-203ENST00000448935 RTL1A6NKG5 1358 aa13.66□□□□□ -0.22
VIPAS39-203ENST00000448935 KCNH5Q8NCM2 988 aa13.66□□□□□ -0.22
VIPAS39-203ENST00000448935 RNF25Q96BH1 459 aaPredicted RBP13.66□□□□□ -0.22
VIPAS39-203ENST00000448935 GSE1Q14687 1217 aa13.65□□□□□ -0.22
VIPAS39-203ENST00000448935 HSP90AB2PQ58FF8 381 aa13.65□□□□□ -0.22
VIPAS39-203ENST00000448935 DLG5Q8TDM6 1919 aa13.65□□□□□ -0.22
VIPAS39-203ENST00000448935 FANCIQ9NVI1 1328 aa13.65□□□□□ -0.22
VIPAS39-203ENST00000448935 C1orf167Q5SNV9 1468 aa13.65□□□□□ -0.22
VIPAS39-203ENST00000448935 SOX12O15370 315 aa13.64□□□□□ -0.23
VIPAS39-203ENST00000448935 ATF3P18847 181 aa13.64□□□□□ -0.23
VIPAS39-203ENST00000448935 CANXP27824 592 aaKnown RBP13.64□□□□□ -0.23
VIPAS39-203ENST00000448935 PDE3AQ14432 1141 aa13.64□□□□□ -0.23
VIPAS39-203ENST00000448935 CRBNQ96SW2 442 aa13.64□□□□□ -0.23
VIPAS39-203ENST00000448935 LMTK3Q96Q04 1460 aa13.64□□□□□ -0.23
VIPAS39-203ENST00000448935 STRCP1A6NGW2 1772 aa13.64□□□□□ -0.23
VIPAS39-203ENST00000448935 RARSP54136 660 aaKnown RBP13.64□□□□□ -0.23
VIPAS39-203ENST00000448935 SULT6B1Q6IMI4 303 aa13.64□□□□□ -0.23
VIPAS39-203ENST00000448935 PHACTR3Q96KR7 559 aa13.64□□□□□ -0.23
VIPAS39-203ENST00000448935 LTN1O94822 1766 aa13.63□□□□□ -0.23
VIPAS39-203ENST00000448935 PHRF1Q9P1Y6 1649 aaKnown RBP13.63□□□□□ -0.23
VIPAS39-203ENST00000448935 BCAR3O75815 825 aa13.63□□□□□ -0.23
VIPAS39-203ENST00000448935 GNAI1P63096 354 aa13.63□□□□□ -0.23
VIPAS39-203ENST00000448935 ZNF428Q96B54 188 aa13.63□□□□□ -0.23
VIPAS39-203ENST00000448935 TMEM94Q12767 1356 aa13.63□□□□□ -0.23
VIPAS39-203ENST00000448935 MS4A1P11836 297 aa13.62□□□□□ -0.23
VIPAS39-203ENST00000448935 CADPS2Q86UW7 1296 aa13.62□□□□□ -0.23
VIPAS39-203ENST00000448935 TRPM3Q9HCF6 1732 aaPredicted RBP13.62□□□□□ -0.23
VIPAS39-203ENST00000448935 HOXC9P31274 260 aa13.61□□□□□ -0.23
VIPAS39-203ENST00000448935 HSPA2P54652 639 aa13.61□□□□□ -0.23
VIPAS39-203ENST00000448935 AAMPQ13685 434 aa13.61□□□□□ -0.23
VIPAS39-203ENST00000448935 ORAI2Q96SN7 254 aa13.61□□□□□ -0.23
VIPAS39-203ENST00000448935 IFT57Q9NWB7 429 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms