RNA–Protein interactions for RNA: ENST00000448745.5

CPSF7-206, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CPSF7, Length 1,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-206ENST00000448745 SRPK2P78362 688 aaKnown RBP10.64□□□□□ -0.71
CPSF7-206ENST00000448745 CCDC27Q2M243 656 aa10.64□□□□□ -0.71
CPSF7-206ENST00000448745 NUDT16Q96DE0 195 aaKnown RBP10.64□□□□□ -0.71
CPSF7-206ENST00000448745 MST1RQ04912 1400 aa10.64□□□□□ -0.71
CPSF7-206ENST00000448745 ANKARQ7Z5J8 1434 aa10.64□□□□□ -0.71
CPSF7-206ENST00000448745 ATAD2Q6PL18 1390 aa10.64□□□□□ -0.71
CPSF7-206ENST00000448745 DDX11L8A8MPP1 907 aa10.64□□□□□ -0.71
CPSF7-206ENST00000448745 GLIPR1L2Q4G1C9 344 aa10.64□□□□□ -0.71
CPSF7-206ENST00000448745 SLC12A5Q9H2X9 1139 aa10.64□□□□□ -0.71
CPSF7-206ENST00000448745 CT47B1P0C2W7 299 aaPredicted RBP10.63□□□□□ -0.71
CPSF7-206ENST00000448745 MYH16Q9H6N6 1097 aa10.63□□□□□ -0.71
CPSF7-206ENST00000448745 MSH6P52701 1360 aa10.62□□□□□ -0.71
CPSF7-206ENST00000448745 NUTM2FA1L443 756 aa10.62□□□□□ -0.71
CPSF7-206ENST00000448745 PTMSP20962 102 aa10.62□□□□□ -0.71
CPSF7-206ENST00000448745 C14orf37Q86TY3 774 aa10.62□□□□□ -0.71
CPSF7-206ENST00000448745 CFAP53Q96M91 514 aa10.62□□□□□ -0.71
CPSF7-206ENST00000448745 PCDHB15Q9Y5E8 787 aa10.62□□□□□ -0.71
CPSF7-206ENST00000448745 CCDC61Q9Y6R9 512 aa10.62□□□□□ -0.71
CPSF7-206ENST00000448745 ITSN1Q15811 1721 aa10.62□□□□□ -0.71
CPSF7-206ENST00000448745 C1orf167Q5SNV9 1468 aa10.62□□□□□ -0.71
CPSF7-206ENST00000448745 CPSF1Q10570 1443 aaKnown RBP10.61□□□□□ -0.71
CPSF7-206ENST00000448745 PPIP5K1Q6PFW1 1433 aa10.61□□□□□ -0.71
CPSF7-206ENST00000448745 NSD3Q9BZ95 1437 aa10.61□□□□□ -0.71
CPSF7-206ENST00000448745 CLCN1P35523 988 aa10.61□□□□□ -0.71
CPSF7-206ENST00000448745 MRE11P49959 708 aa10.61□□□□□ -0.71
CPSF7-206ENST00000448745 MORC1Q86VD1 984 aa10.61□□□□□ -0.71
CPSF7-206ENST00000448745 CARD14Q9BXL6 1004 aa10.61□□□□□ -0.71
CPSF7-206ENST00000448745 PNNQ9H307 717 aaKnown RBP10.61□□□□□ -0.71
CPSF7-206ENST00000448745 CABP1Q9NZU7 370 aa10.61□□□□□ -0.71
CPSF7-206ENST00000448745 AKAP12Q02952 1782 aa10.61□□□□□ -0.71
CPSF7-206ENST00000448745 PLEKHG3A1L390 1219 aa10.61□□□□□ -0.71
CPSF7-206ENST00000448745 XRCC6P12956 609 aaKnown RBP eCLIP10.61□□□□□ -0.71
CPSF7-206ENST00000448745 MVPQ14764 893 aaKnown RBP10.61□□□□□ -0.71
CPSF7-206ENST00000448745 CADPS2Q86UW7 1296 aa10.61□□□□□ -0.71
CPSF7-206ENST00000448745 HSCBQ8IWL3 235 aa10.61□□□□□ -0.71
CPSF7-206ENST00000448745 C22orf23Q9BZE7 217 aa10.61□□□□□ -0.71
CPSF7-206ENST00000448745 ZKSCAN2Q63HK3 967 aa10.6□□□□□ -0.71
CPSF7-206ENST00000448745 A0A1W2PP64 1363 aa10.6□□□□□ -0.71
CPSF7-206ENST00000448745 NSD2O96028 1365 aa10.6□□□□□ -0.71
CPSF7-206ENST00000448745 MON2Q7Z3U7 1717 aa10.59□□□□□ -0.71
CPSF7-206ENST00000448745 TRAK2O60296 914 aa10.59□□□□□ -0.71
CPSF7-206ENST00000448745 TCP11L2Q8N4U5 519 aa10.59□□□□□ -0.71
CPSF7-206ENST00000448745 ORAI2Q96SN7 254 aa10.59□□□□□ -0.71
CPSF7-206ENST00000448745 ANKRD36BQ8N2N9 1353 aa10.59□□□□□ -0.71
CPSF7-206ENST00000448745 RLBP1P12271 317 aa10.58□□□□□ -0.72
CPSF7-206ENST00000448745 ATF3P18847 181 aa10.58□□□□□ -0.72
CPSF7-206ENST00000448745 HDAC1Q13547 482 aaPredicted RBP10.58□□□□□ -0.72
CPSF7-206ENST00000448745 FTSJ3Q8IY81 847 aaKnown RBP10.58□□□□□ -0.72
CPSF7-206ENST00000448745 NAP1L5Q96NT1 182 aaPredicted RBP10.58□□□□□ -0.72
CPSF7-206ENST00000448745 SSH2Q76I76 1423 aa10.58□□□□□ -0.72
CPSF7-206ENST00000448745 NRKQ7Z2Y5 1582 aa10.58□□□□□ -0.72
CPSF7-206ENST00000448745 DZIP1LQ8IYY4 767 aaKnown RBP10.58□□□□□ -0.72
CPSF7-206ENST00000448745 SLAIN2Q9P270 581 aa10.58□□□□□ -0.72
CPSF7-206ENST00000448745 CIZ1Q9ULV3 898 aaPredicted RBP10.58□□□□□ -0.72
CPSF7-206ENST00000448745 ANKRD26Q9UPS8 1709 aa10.57□□□□□ -0.72
CPSF7-206ENST00000448745 ACEP12821 1306 aa10.57□□□□□ -0.72
CPSF7-206ENST00000448745 KIF1AQ12756 1690 aa10.57□□□□□ -0.72
CPSF7-206ENST00000448745 NPM3O75607 178 aaKnown RBP10.56□□□□□ -0.72
CPSF7-206ENST00000448745 HSP90AA1P07900 732 aaKnown RBP10.56□□□□□ -0.72
CPSF7-206ENST00000448745 MFAP1P55081 439 aaKnown RBP10.56□□□□□ -0.72
CPSF7-206ENST00000448745 ESCO1Q5FWF5 840 aa10.56□□□□□ -0.72
CPSF7-206ENST00000448745 SNX21Q969T3 373 aa10.56□□□□□ -0.72
CPSF7-206ENST00000448745 DDX19BQ9UMR2 479 aa10.56□□□□□ -0.72
CPSF7-206ENST00000448745 PHF8Q9UPP1 1060 aa10.56□□□□□ -0.72
CPSF7-206ENST00000448745 USP6P35125 1406 aa10.55□□□□□ -0.72
CPSF7-206ENST00000448745 NEUROD2Q15784 382 aa10.55□□□□□ -0.72
CPSF7-206ENST00000448745 SKOR2Q2VWA4 1001 aaPredicted RBP10.55□□□□□ -0.72
CPSF7-206ENST00000448745 BRINP3Q76B58 766 aa10.55□□□□□ -0.72
CPSF7-206ENST00000448745 GBP4Q96PP9 640 aa10.55□□□□□ -0.72
CPSF7-206ENST00000448745 GRPEL1Q9HAV7 217 aa10.55□□□□□ -0.72
CPSF7-206ENST00000448745 RRP7AQ9Y3A4 280 aaKnown RBP10.55□□□□□ -0.72
CPSF7-206ENST00000448745 RRP9O43818 475 aaKnown RBP10.55□□□□□ -0.72
CPSF7-206ENST00000448745 TERF2IPQ9NYB0 399 aa10.55□□□□□ -0.72
CPSF7-206ENST00000448745 TNNQ9UQP3 1299 aa10.55□□□□□ -0.72
CPSF7-206ENST00000448745 TRPM3Q9HCF6 1732 aaPredicted RBP10.54□□□□□ -0.72
CPSF7-206ENST00000448745 GZF1Q9H116 711 aaPredicted RBP10.54□□□□□ -0.72
CPSF7-206ENST00000448745 EDC4Q6P2E9 1401 aaKnown RBP10.53□□□□□ -0.72
CPSF7-206ENST00000448745 IL16Q14005 1332 aa10.53□□□□□ -0.72
CPSF7-206ENST00000448745 FOXO3O43524 673 aa10.53□□□□□ -0.72
CPSF7-206ENST00000448745 RBM25P49756 843 aaKnown RBP10.53□□□□□ -0.72
CPSF7-206ENST00000448745 SMC5Q8IY18 1101 aa10.53□□□□□ -0.72
CPSF7-206ENST00000448745 SPRYD3Q8NCJ5 442 aa10.53□□□□□ -0.72
CPSF7-206ENST00000448745 ZNF692Q9BU19 519 aaPredicted RBP10.53□□□□□ -0.72
CPSF7-206ENST00000448745 BCL2L13Q9BXK5 485 aa10.53□□□□□ -0.72
CPSF7-206ENST00000448745 ROBO1Q9Y6N7 1651 aa10.53□□□□□ -0.72
CPSF7-206ENST00000448745 NHSL1Q5SYE7 1610 aa10.53□□□□□ -0.72
CPSF7-206ENST00000448745 PXDNQ92626 1479 aa10.53□□□□□ -0.72
CPSF7-206ENST00000448745 KIF16BQ96L93 1317 aa10.53□□□□□ -0.72
CPSF7-206ENST00000448745 DDIT3P35638 169 aa10.53□□□□□ -0.72
CPSF7-206ENST00000448745 DDX17Q92841 729 aaKnown RBP10.53□□□□□ -0.72
CPSF7-206ENST00000448745 TRIM44Q96DX7 344 aaPredicted RBP10.53□□□□□ -0.72
CPSF7-206ENST00000448745 ARXQ96QS3 562 aa10.53□□□□□ -0.72
CPSF7-206ENST00000448745 PANK2Q9BZ23 570 aa10.53□□□□□ -0.72
CPSF7-206ENST00000448745 SMC4Q9NTJ3 1288 aa10.53□□□□□ -0.72
CPSF7-206ENST00000448745 MARF1Q9Y4F3 1742 aaKnown RBP10.52□□□□□ -0.73
CPSF7-206ENST00000448745 ESPNB1AK53 854 aa10.52□□□□□ -0.73
CPSF7-206ENST00000448745 TPM2P07951 284 aa10.52□□□□□ -0.73
CPSF7-206ENST00000448745 MTHFSP49914 203 aa10.52□□□□□ -0.73
CPSF7-206ENST00000448745 HDGFL2Q7Z4V5 671 aaPredicted RBP10.52□□□□□ -0.73
CPSF7-206ENST00000448745 NGDNQ8NEJ9 315 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms