RNA–Protein interactions for RNA: ENST00000447906.6

OTUD4-201, Transcript of OTU deubiquitinase 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene OTUD4, Length 3,829 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-201ENST00000447906 RNF214Q8ND24 703 aa17.04■□□□□ 0.32
OTUD4-201ENST00000447906 ALDH1L2Q3SY69 923 aa17.04■□□□□ 0.32
OTUD4-201ENST00000447906 CAVIN1Q6NZI2 390 aaKnown RBP17.04■□□□□ 0.32
OTUD4-201ENST00000447906 DIAPH3Q9NSV4 1193 aa17.04■□□□□ 0.32
OTUD4-201ENST00000447906 IFT57Q9NWB7 429 aa17.03■□□□□ 0.32
OTUD4-201ENST00000447906 TRIM35Q9UPQ4 493 aa17.03■□□□□ 0.32
OTUD4-201ENST00000447906 GNAI2P04899 355 aa17.03■□□□□ 0.32
OTUD4-201ENST00000447906 CCDC30Q5VVM6 783 aa17.03■□□□□ 0.32
OTUD4-201ENST00000447906 GAS2L2Q8NHY3 880 aa17.03■□□□□ 0.32
OTUD4-201ENST00000447906 PRPF40AO75400 957 aaKnown RBP17.02■□□□□ 0.32
OTUD4-201ENST00000447906 HSP90AA2PQ14568 343 aaPredicted RBP17.02■□□□□ 0.32
OTUD4-201ENST00000447906 ZMYM4Q5VZL5 1548 aa17.02■□□□□ 0.32
OTUD4-201ENST00000447906 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.02■□□□□ 0.32
OTUD4-201ENST00000447906 CCDC27Q2M243 656 aa17.02■□□□□ 0.32
OTUD4-201ENST00000447906 CLASP1Q7Z460 1538 aa17.02■□□□□ 0.32
OTUD4-201ENST00000447906 NPATQ14207 1427 aa17.02■□□□□ 0.31
OTUD4-201ENST00000447906 K7ELQ4 463 aaPredicted RBP17.02■□□□□ 0.31
OTUD4-201ENST00000447906 PTPRTO14522 1441 aa17.01■□□□□ 0.31
OTUD4-201ENST00000447906 TBC1D9Q6ZT07 1266 aa17.01■□□□□ 0.31
OTUD4-201ENST00000447906 SKOR2Q2VWA4 1001 aaPredicted RBP17.01■□□□□ 0.31
OTUD4-201ENST00000447906 NLRP2Q9NX02 1062 aa17.01■□□□□ 0.31
OTUD4-201ENST00000447906 ZNF521Q96K83 1311 aa17.01■□□□□ 0.31
OTUD4-201ENST00000447906 PLXNC1O60486 1568 aa17.01■□□□□ 0.31
OTUD4-201ENST00000447906 VAMP4O75379 141 aa17■□□□□ 0.31
OTUD4-201ENST00000447906 PANK2Q9BZ23 570 aa17■□□□□ 0.31
OTUD4-201ENST00000447906 RSPH6AQ9H0K4 717 aa17■□□□□ 0.31
OTUD4-201ENST00000447906 AMOTL2Q9Y2J4 779 aa17■□□□□ 0.31
OTUD4-201ENST00000447906 FOXO3O43524 673 aa17■□□□□ 0.31
OTUD4-201ENST00000447906 GNAI3P08754 354 aa17■□□□□ 0.31
OTUD4-201ENST00000447906 IFIT2P09913 472 aaKnown RBP17■□□□□ 0.31
OTUD4-201ENST00000447906 ACEP12821 1306 aa17■□□□□ 0.31
OTUD4-201ENST00000447906 PTMSP20962 102 aa17■□□□□ 0.31
OTUD4-201ENST00000447906 ABCC11Q96J66 1382 aa17■□□□□ 0.31
OTUD4-201ENST00000447906 ZRSR1Q15695 479 aaKnown RBP17■□□□□ 0.31
OTUD4-201ENST00000447906 THEMISQ8N1K5 641 aaPredicted RBP17■□□□□ 0.31
OTUD4-201ENST00000447906 GPATCH3Q96I76 525 aa17■□□□□ 0.31
OTUD4-201ENST00000447906 UPF3BQ9BZI7 483 aaKnown RBP17■□□□□ 0.31
OTUD4-201ENST00000447906 BCL11BQ9C0K0 894 aaPredicted RBP17■□□□□ 0.31
OTUD4-201ENST00000447906 MEIS3Q99687 375 aa16.99■□□□□ 0.31
OTUD4-201ENST00000447906 NEO1Q92859 1461 aa16.99■□□□□ 0.31
OTUD4-201ENST00000447906 ZFYVE16Q7Z3T8 1539 aa16.99■□□□□ 0.31
OTUD4-201ENST00000447906 ZBTB40Q9NUA8 1239 aa16.99■□□□□ 0.31
OTUD4-201ENST00000447906 NUCB2P80303 420 aa16.98■□□□□ 0.31
OTUD4-201ENST00000447906 ANXA1P04083 346 aa16.98■□□□□ 0.31
OTUD4-201ENST00000447906 HSP90B1P14625 803 aaKnown RBP16.98■□□□□ 0.31
OTUD4-201ENST00000447906 NUTM1Q86Y26 1132 aa16.98■□□□□ 0.31
OTUD4-201ENST00000447906 DRC7Q8IY82 874 aa16.98■□□□□ 0.31
OTUD4-201ENST00000447906 NPC1L1Q9UHC9 1359 aa16.98■□□□□ 0.31
OTUD4-201ENST00000447906 HDAC1Q13547 482 aaPredicted RBP16.98■□□□□ 0.31
OTUD4-201ENST00000447906 SHROOM2Q13796 1616 aa16.98■□□□□ 0.31
OTUD4-201ENST00000447906 MRE11P49959 708 aa16.97■□□□□ 0.31
OTUD4-201ENST00000447906 RABEP1Q15276 862 aa16.97■□□□□ 0.31
OTUD4-201ENST00000447906 NSD2O96028 1365 aa16.97■□□□□ 0.31
OTUD4-201ENST00000447906 GORABQ5T7V8 394 aa16.97■□□□□ 0.31
OTUD4-201ENST00000447906 NUCB1Q02818 461 aa16.97■□□□□ 0.31
OTUD4-201ENST00000447906 RPAP2Q8IXW5 612 aaPredicted RBP16.97■□□□□ 0.31
OTUD4-201ENST00000447906 LRRCC1Q9C099 1032 aa16.97■□□□□ 0.31
OTUD4-201ENST00000447906 ARAP3Q8WWN8 1544 aa16.96■□□□□ 0.31
OTUD4-201ENST00000447906 VPS37CA5D8V6 355 aaPredicted RBP16.96■□□□□ 0.31
OTUD4-201ENST00000447906 TRMT2AQ8IZ69 625 aaKnown RBP16.96■□□□□ 0.31
OTUD4-201ENST00000447906 DDX54Q8TDD1 881 aaKnown RBP16.96■□□□□ 0.31
OTUD4-201ENST00000447906 SRGAP3O43295 1099 aa16.96■□□□□ 0.31
OTUD4-201ENST00000447906 SSFA2P28290 1259 aa16.96■□□□□ 0.31
OTUD4-201ENST00000447906 LARP6Q9BRS8 491 aaKnown RBP16.96■□□□□ 0.31
OTUD4-201ENST00000447906 SIL1Q9H173 461 aa16.96■□□□□ 0.31
OTUD4-201ENST00000447906 IQGAP3Q86VI3 1631 aa16.96■□□□□ 0.31
OTUD4-201ENST00000447906 ZNF530Q6P9A1 599 aaPredicted RBP16.96■□□□□ 0.31
OTUD4-201ENST00000447906 ERC2O15083 957 aa16.95■□□□□ 0.3
OTUD4-201ENST00000447906 MRPL50Q8N5N7 158 aaKnown RBP16.95■□□□□ 0.3
OTUD4-201ENST00000447906 TNPO1Q92973 898 aaKnown RBP16.95■□□□□ 0.3
OTUD4-201ENST00000447906 TRPM2O94759 1503 aa16.95■□□□□ 0.3
OTUD4-201ENST00000447906 YEATS2Q9ULM3 1422 aa16.95■□□□□ 0.3
OTUD4-201ENST00000447906 SYAP1Q96A49 352 aaPredicted RBP16.95■□□□□ 0.3
OTUD4-201ENST00000447906 CHMP4AQ9BY43 222 aa16.95■□□□□ 0.3
OTUD4-201ENST00000447906 EIF4A2Q14240 407 aaKnown RBP16.95■□□□□ 0.3
OTUD4-201ENST00000447906 RIC3Q7Z5B4 369 aa16.95■□□□□ 0.3
OTUD4-201ENST00000447906 FAM13BQ9NYF5 915 aa16.95■□□□□ 0.3
OTUD4-201ENST00000447906 MLH3Q9UHC1 1453 aa16.95■□□□□ 0.3
OTUD4-201ENST00000447906 NASPP49321 788 aaPredicted RBP16.94■□□□□ 0.3
OTUD4-201ENST00000447906 CCT4P50991 539 aaKnown RBP16.94■□□□□ 0.3
OTUD4-201ENST00000447906 G3BP1Q13283 466 aaKnown RBP eCLIP16.94■□□□□ 0.3
OTUD4-201ENST00000447906 FOSBP53539 338 aa16.94■□□□□ 0.3
OTUD4-201ENST00000447906 ZC3H6P61129 1189 aaKnown RBP16.94■□□□□ 0.3
OTUD4-201ENST00000447906 NEXNQ0ZGT2 675 aa16.94■□□□□ 0.3
OTUD4-201ENST00000447906 BMP2KLQ5H9B9 411 aa16.94■□□□□ 0.3
OTUD4-201ENST00000447906 IL16Q14005 1332 aa16.93■□□□□ 0.3
OTUD4-201ENST00000447906 UNC13BO14795 1591 aa16.93■□□□□ 0.3
OTUD4-201ENST00000447906 ERVK-7P63135 1459 aa16.93■□□□□ 0.3
OTUD4-201ENST00000447906 CLASRPQ8N2M8 674 aaKnown RBP16.93■□□□□ 0.3
OTUD4-201ENST00000447906 PUS7Q96PZ0 661 aaKnown RBP16.93■□□□□ 0.3
OTUD4-201ENST00000447906 SMC5Q8IY18 1101 aa16.93■□□□□ 0.3
OTUD4-201ENST00000447906 RAPGEF4Q8WZA2 1011 aa16.93■□□□□ 0.3
OTUD4-201ENST00000447906 SRCIN1Q9C0H9 1055 aa16.93■□□□□ 0.3
OTUD4-201ENST00000447906 GRPEL1Q9HAV7 217 aa16.93■□□□□ 0.3
OTUD4-201ENST00000447906 TTC5Q8N0Z6 440 aa16.92■□□□□ 0.3
OTUD4-201ENST00000447906 GNAT3A8MTJ3 354 aa16.92■□□□□ 0.3
OTUD4-201ENST00000447906 TAF7LQ5H9L4 462 aa16.92■□□□□ 0.3
OTUD4-201ENST00000447906 OTUD7AQ8TE49 926 aaPredicted RBP16.92■□□□□ 0.3
OTUD4-201ENST00000447906 LRRFIP2Q9Y608 721 aaKnown RBP16.92■□□□□ 0.3
OTUD4-201ENST00000447906 MYL6BP14649 208 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms