RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 DAXXQ9UER7 740 aaPredicted RBP20.84■□□□□ 0.93
OTUB1-204ENST00000447683 ACEP12821 1306 aa20.84■□□□□ 0.93
OTUB1-204ENST00000447683 PTCH1Q13635 1447 aa20.84■□□□□ 0.93
OTUB1-204ENST00000447683 OVOS2A0A0J9YW53 1432 aa20.83■□□□□ 0.93
OTUB1-204ENST00000447683 USP6P35125 1406 aa20.83■□□□□ 0.93
OTUB1-204ENST00000447683 OVOS2Q6IE36 1432 aa20.83■□□□□ 0.93
OTUB1-204ENST00000447683 RRS1Q15050 365 aaKnown RBP20.83■□□□□ 0.93
OTUB1-204ENST00000447683 TRIM27P14373 513 aa20.82■□□□□ 0.92
OTUB1-204ENST00000447683 ALDH1L2Q3SY69 923 aa20.82■□□□□ 0.92
OTUB1-204ENST00000447683 FTSJ3Q8IY81 847 aaKnown RBP20.82■□□□□ 0.92
OTUB1-204ENST00000447683 CALD1Q05682 793 aaKnown RBP20.82■□□□□ 0.92
OTUB1-204ENST00000447683 ATF7IPQ6VMQ6 1270 aa20.82■□□□□ 0.92
OTUB1-204ENST00000447683 ZNF428Q96B54 188 aa20.81■□□□□ 0.92
OTUB1-204ENST00000447683 AMOTL2Q9Y2J4 779 aa20.81■□□□□ 0.92
OTUB1-204ENST00000447683 SSH2Q76I76 1423 aa20.81■□□□□ 0.92
OTUB1-204ENST00000447683 THEMISQ8N1K5 641 aaPredicted RBP20.81■□□□□ 0.92
OTUB1-204ENST00000447683 BRPF1P55201 1214 aaPredicted RBP20.8■□□□□ 0.92
OTUB1-204ENST00000447683 KIF16BQ96L93 1317 aa20.8■□□□□ 0.92
OTUB1-204ENST00000447683 RWDD1Q9H446 243 aaPredicted RBP20.79■□□□□ 0.92
OTUB1-204ENST00000447683 XRN1Q8IZH2 1706 aaKnown RBP20.79■□□□□ 0.92
OTUB1-204ENST00000447683 DDRGK1Q96HY6 314 aa20.79■□□□□ 0.92
OTUB1-204ENST00000447683 NOB1Q9ULX3 412 aaKnown RBP20.79■□□□□ 0.92
OTUB1-204ENST00000447683 ZNF853P0CG23 659 aa20.78■□□□□ 0.92
OTUB1-204ENST00000447683 USP31Q70CQ4 1352 aa20.78■□□□□ 0.92
OTUB1-204ENST00000447683 RIMS1Q86UR5 1692 aaKnown RBP20.78■□□□□ 0.92
OTUB1-204ENST00000447683 IFT57Q9NWB7 429 aa20.78■□□□□ 0.92
OTUB1-204ENST00000447683 DDX19BQ9UMR2 479 aa20.78■□□□□ 0.92
OTUB1-204ENST00000447683 IPO8O15397 1037 aaKnown RBP20.77■□□□□ 0.92
OTUB1-204ENST00000447683 GNAI1P63096 354 aa20.77■□□□□ 0.92
OTUB1-204ENST00000447683 LMOD3Q0VAK6 560 aa20.77■□□□□ 0.92
OTUB1-204ENST00000447683 RGPD8O14715 1765 aaPredicted RBP20.77■□□□□ 0.92
OTUB1-204ENST00000447683 PEAK1Q9H792 1746 aa20.77■□□□□ 0.91
OTUB1-204ENST00000447683 RGPD1P0DJD0 1748 aa20.76■□□□□ 0.91
OTUB1-204ENST00000447683 NUTM2FA1L443 756 aa20.75■□□□□ 0.91
OTUB1-204ENST00000447683 THUMPD2Q9BTF0 503 aaKnown RBP20.75■□□□□ 0.91
OTUB1-204ENST00000447683 TTC21AQ8NDW8 1320 aa20.74■□□□□ 0.91
OTUB1-204ENST00000447683 VAMP4O75379 141 aa20.74■□□□□ 0.91
OTUB1-204ENST00000447683 EIF4A2Q14240 407 aaKnown RBP20.74■□□□□ 0.91
OTUB1-204ENST00000447683 PDZRN3Q9UPQ7 1066 aa20.74■□□□□ 0.91
OTUB1-204ENST00000447683 LAS1LQ9Y4W2 734 aaKnown RBP20.73■□□□□ 0.91
OTUB1-204ENST00000447683 HDAC1Q13547 482 aaPredicted RBP20.72■□□□□ 0.91
OTUB1-204ENST00000447683 ITPRIPQ8IWB1 547 aa20.72■□□□□ 0.91
OTUB1-204ENST00000447683 TMEM57Q8N5G2 664 aa20.72■□□□□ 0.91
OTUB1-204ENST00000447683 CFAP44Q96MT7 982 aa20.72■□□□□ 0.91
OTUB1-204ENST00000447683 MBIPQ9NS73 344 aa20.72■□□□□ 0.91
OTUB1-204ENST00000447683 PLPPR3Q6T4P5 718 aa20.71■□□□□ 0.91
OTUB1-204ENST00000447683 CEP170BQ9Y4F5 1589 aaPredicted RBP20.71■□□□□ 0.91
OTUB1-204ENST00000447683 FMN2Q9NZ56 1722 aa20.71■□□□□ 0.91
OTUB1-204ENST00000447683 ZBTB40Q9NUA8 1239 aa20.71■□□□□ 0.91
OTUB1-204ENST00000447683 PIK3R4Q99570 1358 aa20.71■□□□□ 0.91
OTUB1-204ENST00000447683 MRPL50Q8N5N7 158 aaKnown RBP20.7■□□□□ 0.9
OTUB1-204ENST00000447683 ARHGAP45Q92619 1136 aa20.7■□□□□ 0.9
OTUB1-204ENST00000447683 ANKARQ7Z5J8 1434 aa20.69■□□□□ 0.9
OTUB1-204ENST00000447683 TSPYL6Q8N831 410 aa20.69■□□□□ 0.9
OTUB1-204ENST00000447683 SULT6B1Q6IMI4 303 aa20.68■□□□□ 0.9
OTUB1-204ENST00000447683 AEBP1Q8IUX7 1158 aa20.68■□□□□ 0.9
OTUB1-204ENST00000447683 PIK3C2AO00443 1686 aa20.67■□□□□ 0.9
OTUB1-204ENST00000447683 HSP90AB2PQ58FF8 381 aa20.67■□□□□ 0.9
OTUB1-204ENST00000447683 FAM83GA6ND36 823 aa20.66■□□□□ 0.9
OTUB1-204ENST00000447683 USP19O94966 1318 aa20.66■□□□□ 0.9
OTUB1-204ENST00000447683 TWISTNBQ3B726 338 aaPredicted RBP20.65■□□□□ 0.9
OTUB1-204ENST00000447683 SMC5Q8IY18 1101 aa20.65■□□□□ 0.9
OTUB1-204ENST00000447683 NBR1Q14596 966 aa20.65■□□□□ 0.9
OTUB1-204ENST00000447683 NGDNQ8NEJ9 315 aaKnown RBP20.65■□□□□ 0.9
OTUB1-204ENST00000447683 USP54Q70EL1 1684 aa20.65■□□□□ 0.9
OTUB1-204ENST00000447683 MAP3K19Q56UN5 1328 aa20.64■□□□□ 0.9
OTUB1-204ENST00000447683 KCNA6P17658 529 aa20.64■□□□□ 0.89
OTUB1-204ENST00000447683 SBNO1A3KN83 1393 aa20.64■□□□□ 0.89
OTUB1-204ENST00000447683 ARHGEF10O15013 1369 aa20.64■□□□□ 0.89
OTUB1-204ENST00000447683 C8orf58Q8NAV2 365 aa20.64■□□□□ 0.89
OTUB1-204ENST00000447683 CHD2O14647 1828 aaKnown RBP20.63■□□□□ 0.89
OTUB1-204ENST00000447683 TRHP20396 242 aaPredicted RBP20.63■□□□□ 0.89
OTUB1-204ENST00000447683 DCTN1Q14203 1278 aa20.63■□□□□ 0.89
OTUB1-204ENST00000447683 MARF1Q9Y4F3 1742 aaKnown RBP20.63■□□□□ 0.89
OTUB1-204ENST00000447683 FLT4P35916 1363 aa20.62■□□□□ 0.89
OTUB1-204ENST00000447683 ZNF142P52746 1687 aaPredicted RBP20.62■□□□□ 0.89
OTUB1-204ENST00000447683 SEC24BO95487 1268 aa20.61■□□□□ 0.89
OTUB1-204ENST00000447683 CHMP4BQ9H444 224 aaKnown RBP20.61■□□□□ 0.89
OTUB1-204ENST00000447683 ABCC4O15439 1325 aa20.61■□□□□ 0.89
OTUB1-204ENST00000447683 ELL2O00472 640 aaPredicted RBP20.6■□□□□ 0.89
OTUB1-204ENST00000447683 ZBTB7BO15156 539 aaPredicted RBP20.6■□□□□ 0.89
OTUB1-204ENST00000447683 KDRP35968 1356 aa20.59■□□□□ 0.89
OTUB1-204ENST00000447683 CHL1O00533 1208 aa20.59■□□□□ 0.89
OTUB1-204ENST00000447683 SOX12O15370 315 aa20.58■□□□□ 0.88
OTUB1-204ENST00000447683 PKNOX2Q96KN3 472 aa20.58■□□□□ 0.88
OTUB1-204ENST00000447683 KIAA0232Q92628 1395 aa20.57■□□□□ 0.88
OTUB1-204ENST00000447683 API5Q9BZZ5 524 aaKnown RBP20.57■□□□□ 0.88
OTUB1-204ENST00000447683 KIF24Q5T7B8 1368 aa20.57■□□□□ 0.88
OTUB1-204ENST00000447683 CRB1P82279 1406 aa20.56■□□□□ 0.88
OTUB1-204ENST00000447683 HAP1P54257 671 aaPredicted RBP20.56■□□□□ 0.88
OTUB1-204ENST00000447683 IGSF1Q8N6C5 1336 aa20.56■□□□□ 0.88
OTUB1-204ENST00000447683 SETD1BQ9UPS6 1966 aaKnown RBP20.56■□□□□ 0.88
OTUB1-204ENST00000447683 SLC4A3P48751 1232 aa20.55■□□□□ 0.88
OTUB1-204ENST00000447683 MCM10Q7L590 875 aa20.55■□□□□ 0.88
OTUB1-204ENST00000447683 ANKLE2Q86XL3 938 aa20.55■□□□□ 0.88
OTUB1-204ENST00000447683 ADAMTSL3P82987 1691 aa20.55■□□□□ 0.88
OTUB1-204ENST00000447683 AMPHP49418 695 aa20.54■□□□□ 0.88
OTUB1-204ENST00000447683 NLRP6P59044 892 aa20.54■□□□□ 0.88
OTUB1-204ENST00000447683 NUCB1Q02818 461 aa20.54■□□□□ 0.88
OTUB1-204ENST00000447683 RTL5Q5HYW3 569 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms