RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 PHF23Q9BUL5 403 aaPredicted RBP14.66□□□□□ -0.06
GNE-203ENST00000447283 USP19O94966 1318 aa14.65□□□□□ -0.06
GNE-203ENST00000447283 MTHFSP49914 203 aa14.65□□□□□ -0.06
GNE-203ENST00000447283 ZRANB1Q9UGI0 708 aa14.65□□□□□ -0.06
GNE-203ENST00000447283 MST1RQ04912 1400 aa14.64□□□□□ -0.07
GNE-203ENST00000447283 FOXO3O43524 673 aa14.64□□□□□ -0.07
GNE-203ENST00000447283 RUNDC1Q96C34 613 aa14.64□□□□□ -0.07
GNE-203ENST00000447283 CANXP27824 592 aaKnown RBP14.63□□□□□ -0.07
GNE-203ENST00000447283 WDR63Q8IWG1 891 aa14.63□□□□□ -0.07
GNE-203ENST00000447283 PANK1Q8TE04 598 aa14.63□□□□□ -0.07
GNE-203ENST00000447283 COG6Q9Y2V7 657 aa14.63□□□□□ -0.07
GNE-203ENST00000447283 KIF20BQ96Q89 1820 aa14.62□□□□□ -0.07
GNE-203ENST00000447283 RARSP54136 660 aaKnown RBP14.62□□□□□ -0.07
GNE-203ENST00000447283 CFAP53Q96M91 514 aa14.62□□□□□ -0.07
GNE-203ENST00000447283 SLAIN2Q9P270 581 aa14.62□□□□□ -0.07
GNE-203ENST00000447283 CCDC27Q2M243 656 aa14.61□□□□□ -0.07
GNE-203ENST00000447283 ABTB2Q8N961 1025 aa14.61□□□□□ -0.07
GNE-203ENST00000447283 FRAT1Q92837 279 aaPredicted RBP14.61□□□□□ -0.07
GNE-203ENST00000447283 XIRP1Q702N8 1843 aaKnown RBP14.61□□□□□ -0.07
GNE-203ENST00000447283 NRKQ7Z2Y5 1582 aa14.61□□□□□ -0.07
GNE-203ENST00000447283 NLRP6P59044 892 aa14.6□□□□□ -0.07
GNE-203ENST00000447283 KRT28Q7Z3Y7 464 aa14.6□□□□□ -0.07
GNE-203ENST00000447283 TCP11L2Q8N4U5 519 aa14.6□□□□□ -0.07
GNE-203ENST00000447283 ANKRD26Q9UPS8 1709 aa14.6□□□□□ -0.07
GNE-203ENST00000447283 FRAT2O75474 233 aaPredicted RBP14.6□□□□□ -0.07
GNE-203ENST00000447283 FBLN1P23142 703 aa14.6□□□□□ -0.07
GNE-203ENST00000447283 AATKQ6ZMQ8 1374 aa14.6□□□□□ -0.07
GNE-203ENST00000447283 USP31Q70CQ4 1352 aa14.6□□□□□ -0.07
GNE-203ENST00000447283 POLKQ9UBT6 870 aa14.59□□□□□ -0.07
GNE-203ENST00000447283 OVOS2A0A0J9YW53 1432 aa14.58□□□□□ -0.08
GNE-203ENST00000447283 OVOS2Q6IE36 1432 aa14.58□□□□□ -0.08
GNE-203ENST00000447283 XPCQ01831 940 aaPredicted RBP14.58□□□□□ -0.08
GNE-203ENST00000447283 NUTM2GQ5VZR2 741 aa14.57□□□□□ -0.08
GNE-203ENST00000447283 NPHP3Q7Z494 1330 aa14.57□□□□□ -0.08
GNE-203ENST00000447283 SEC24BO95487 1268 aa14.57□□□□□ -0.08
GNE-203ENST00000447283 BECN1Q14457 450 aa14.57□□□□□ -0.08
GNE-203ENST00000447283 BRINP3Q76B58 766 aa14.57□□□□□ -0.08
GNE-203ENST00000447283 KIF1AQ12756 1690 aa14.56□□□□□ -0.08
GNE-203ENST00000447283 RRP7AQ9Y3A4 280 aaKnown RBP14.56□□□□□ -0.08
GNE-203ENST00000447283 RLBP1P12271 317 aa14.56□□□□□ -0.08
GNE-203ENST00000447283 RRS1Q15050 365 aaKnown RBP14.56□□□□□ -0.08
GNE-203ENST00000447283 NEUROD2Q15784 382 aa14.56□□□□□ -0.08
GNE-203ENST00000447283 BRPF3Q9ULD4 1205 aa14.56□□□□□ -0.08
GNE-203ENST00000447283 PCDHB15Q9Y5E8 787 aa14.56□□□□□ -0.08
GNE-203ENST00000447283 EMILIN1Q9Y6C2 1016 aa14.56□□□□□ -0.08
GNE-203ENST00000447283 LTBP4Q8N2S1 1624 aa14.55□□□□□ -0.08
GNE-203ENST00000447283 DDX17Q92841 729 aaKnown RBP14.55□□□□□ -0.08
GNE-203ENST00000447283 PNPLA6Q8IY17 1366 aa14.55□□□□□ -0.08
GNE-203ENST00000447283 SOX12O15370 315 aa14.54□□□□□ -0.08
GNE-203ENST00000447283 LMOD2Q6P5Q4 547 aa14.54□□□□□ -0.08
GNE-203ENST00000447283 MYH16Q9H6N6 1097 aa14.54□□□□□ -0.08
GNE-203ENST00000447283 PIK3C2AO00443 1686 aa14.53□□□□□ -0.08
GNE-203ENST00000447283 DIAPH1O60610 1272 aaKnown RBP14.53□□□□□ -0.08
GNE-203ENST00000447283 RWDD1Q9H446 243 aaPredicted RBP14.53□□□□□ -0.08
GNE-203ENST00000447283 PDZRN3Q9UPQ7 1066 aa14.53□□□□□ -0.08
GNE-203ENST00000447283 CT47B1P0C2W7 299 aaPredicted RBP14.52□□□□□ -0.08
GNE-203ENST00000447283 TBC1D32Q96NH3 1257 aa14.52□□□□□ -0.08
GNE-203ENST00000447283 TNNQ9UQP3 1299 aa14.52□□□□□ -0.08
GNE-203ENST00000447283 KCNH5Q8NCM2 988 aa14.51□□□□□ -0.09
GNE-203ENST00000447283 UPF2Q9HAU5 1272 aaKnown RBP14.51□□□□□ -0.09
GNE-203ENST00000447283 SBNO1A3KN83 1393 aa14.51□□□□□ -0.09
GNE-203ENST00000447283 MAP2P11137 1827 aaKnown RBP14.51□□□□□ -0.09
GNE-203ENST00000447283 MVPQ14764 893 aaKnown RBP14.51□□□□□ -0.09
GNE-203ENST00000447283 U2AF1L5P0DN76 240 aaPredicted RBP14.5□□□□□ -0.09
GNE-203ENST00000447283 U2AF1Q01081 240 aaKnown RBP eCLIP14.5□□□□□ -0.09
GNE-203ENST00000447283 MAP3K19Q56UN5 1328 aa14.5□□□□□ -0.09
GNE-203ENST00000447283 U2SURPO15042 1029 aaKnown RBP14.5□□□□□ -0.09
GNE-203ENST00000447283 ANTXR1Q9H6X2 564 aa14.5□□□□□ -0.09
GNE-203ENST00000447283 PRKCSHP14314 528 aaPredicted RBP14.49□□□□□ -0.09
GNE-203ENST00000447283 AMPHP49418 695 aa14.49□□□□□ -0.09
GNE-203ENST00000447283 BCL2L13Q9BXK5 485 aa14.49□□□□□ -0.09
GNE-203ENST00000447283 COL3A1P02461 1466 aaPredicted RBP14.49□□□□□ -0.09
GNE-203ENST00000447283 CDK12Q9NYV4 1490 aaPredicted RBP14.49□□□□□ -0.09
GNE-203ENST00000447283 GCP02774 474 aa14.49□□□□□ -0.09
GNE-203ENST00000447283 ZKSCAN2Q63HK3 967 aa14.49□□□□□ -0.09
GNE-203ENST00000447283 SOS2Q07890 1332 aaPredicted RBP14.48□□□□□ -0.09
GNE-203ENST00000447283 SPATA31A3Q5VYP0 1347 aa14.48□□□□□ -0.09
GNE-203ENST00000447283 PXDNQ92626 1479 aa14.48□□□□□ -0.09
GNE-203ENST00000447283 TRPM3Q9HCF6 1732 aaPredicted RBP14.48□□□□□ -0.09
GNE-203ENST00000447283 KCNA4P22459 653 aa14.47□□□□□ -0.09
GNE-203ENST00000447283 IL13P35225 146 aa14.47□□□□□ -0.09
GNE-203ENST00000447283 HSP90AB2PQ58FF8 381 aa14.47□□□□□ -0.09
GNE-203ENST00000447283 ANO8Q9HCE9 1232 aaPredicted RBP14.47□□□□□ -0.09
GNE-203ENST00000447283 PLEKHG5O94827 1062 aa14.47□□□□□ -0.09
GNE-203ENST00000447283 DZIP1LQ8IYY4 767 aaKnown RBP14.47□□□□□ -0.09
GNE-203ENST00000447283 USP54Q70EL1 1684 aa14.47□□□□□ -0.09
GNE-203ENST00000447283 TOM1O60784 492 aa14.46□□□□□ -0.09
GNE-203ENST00000447283 TNS3Q68CZ2 1445 aa14.46□□□□□ -0.09
GNE-203ENST00000447283 FLT4P35916 1363 aa14.46□□□□□ -0.09
GNE-203ENST00000447283 KIF24Q5T7B8 1368 aa14.46□□□□□ -0.09
GNE-203ENST00000447283 TBC1D2Q9BYX2 928 aa14.46□□□□□ -0.1
GNE-203ENST00000447283 PNNQ9H307 717 aaKnown RBP14.46□□□□□ -0.1
GNE-203ENST00000447283 ARHGEF10O15013 1369 aa14.45□□□□□ -0.1
GNE-203ENST00000447283 FTSJ3Q8IY81 847 aaKnown RBP14.45□□□□□ -0.1
GNE-203ENST00000447283 PLEKHF1Q96S99 279 aa14.45□□□□□ -0.1
GNE-203ENST00000447283 SLKQ9H2G2 1235 aaPredicted RBP14.45□□□□□ -0.1
GNE-203ENST00000447283 HDAC1Q13547 482 aaPredicted RBP14.44□□□□□ -0.1
GNE-203ENST00000447283 EIF4A2Q14240 407 aaKnown RBP14.44□□□□□ -0.1
GNE-203ENST00000447283 MARF1Q9Y4F3 1742 aaKnown RBP14.44□□□□□ -0.1
GNE-203ENST00000447283 IL16Q14005 1332 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms