RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 REREQ9P2R6 1566 aa8.82□□□□□ -1
SDCBP-205ENST00000447267 KMT5BQ4FZB7 885 aa8.81□□□□□ -1
SDCBP-205ENST00000447267 NUP153P49790 1475 aaKnown RBP8.81□□□□□ -1
SDCBP-205ENST00000447267 PHLPP1O60346 1717 aa8.8□□□□□ -1
SDCBP-205ENST00000447267 POLR1AO95602 1720 aaPredicted RBP8.8□□□□□ -1
SDCBP-205ENST00000447267 RNF223E7ERA6 249 aa8.8□□□□□ -1
SDCBP-205ENST00000447267 R3HDM1Q15032 1099 aaKnown RBP8.8□□□□□ -1
SDCBP-205ENST00000447267 DAXXQ9UER7 740 aaPredicted RBP8.8□□□□□ -1
SDCBP-205ENST00000447267 SYNMO15061 1565 aa8.8□□□□□ -1
SDCBP-205ENST00000447267 MLH3Q9UHC1 1453 aa8.79□□□□□ -1
SDCBP-205ENST00000447267 FGD6Q6ZV73 1430 aa8.79□□□□□ -1
SDCBP-205ENST00000447267 MROH2AA6NES4 1674 aa8.78□□□□□ -1
SDCBP-205ENST00000447267 KDM5CP41229 1560 aa8.78□□□□□ -1
SDCBP-205ENST00000447267 DDX11L8A8MPP1 907 aa8.78□□□□□ -1
SDCBP-205ENST00000447267 PPEF1O14829 653 aaPredicted RBP8.78□□□□□ -1
SDCBP-205ENST00000447267 S1PR4O95977 384 aa8.78□□□□□ -1
SDCBP-205ENST00000447267 SCUBE3Q8IX30 993 aa8.77□□□□□ -1.01
SDCBP-205ENST00000447267 V9GY48 417 aaPredicted RBP8.77□□□□□ -1.01
SDCBP-205ENST00000447267 CLTCQ00610 1675 aaKnown RBP8.77□□□□□ -1.01
SDCBP-205ENST00000447267 ADAMTS2O95450 1211 aa8.76□□□□□ -1.01
SDCBP-205ENST00000447267 LTKP29376 864 aa8.76□□□□□ -1.01
SDCBP-205ENST00000447267 MAP2K5Q13163 448 aa8.76□□□□□ -1.01
SDCBP-205ENST00000447267 SF3B2Q13435 895 aaKnown RBP8.76□□□□□ -1.01
SDCBP-205ENST00000447267 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.76□□□□□ -1.01
SDCBP-205ENST00000447267 RDH13Q8NBN7 331 aa8.76□□□□□ -1.01
SDCBP-205ENST00000447267 BCL9LQ86UU0 1499 aa8.76□□□□□ -1.01
SDCBP-205ENST00000447267 COL16A1Q07092 1604 aaPredicted RBP8.76□□□□□ -1.01
SDCBP-205ENST00000447267 NHSL1Q5SYE7 1610 aa8.76□□□□□ -1.01
SDCBP-205ENST00000447267 XIRP1Q702N8 1843 aaKnown RBP8.75□□□□□ -1.01
SDCBP-205ENST00000447267 BLMP54132 1417 aaPredicted RBP8.75□□□□□ -1.01
SDCBP-205ENST00000447267 ADH1BP00325 375 aa8.75□□□□□ -1.01
SDCBP-205ENST00000447267 RANGAP1P46060 587 aaPredicted RBP8.75□□□□□ -1.01
SDCBP-205ENST00000447267 GCGRP47871 477 aa8.75□□□□□ -1.01
SDCBP-205ENST00000447267 FUT2Q10981 343 aa8.75□□□□□ -1.01
SDCBP-205ENST00000447267 PLA2G2CQ5R387 149 aa8.75□□□□□ -1.01
SDCBP-205ENST00000447267 MORN1Q5T089 497 aa8.75□□□□□ -1.01
SDCBP-205ENST00000447267 TMUB1Q9BVT8 246 aa8.75□□□□□ -1.01
SDCBP-205ENST00000447267 IQGAP1P46940 1657 aa8.75□□□□□ -1.01
SDCBP-205ENST00000447267 KDM5DQ9BY66 1539 aa8.75□□□□□ -1.01
SDCBP-205ENST00000447267 IRF6O14896 467 aa8.74□□□□□ -1.01
SDCBP-205ENST00000447267 TRIM67Q6ZTA4 783 aa8.74□□□□□ -1.01
SDCBP-205ENST00000447267 THAP11Q96EK4 314 aa8.74□□□□□ -1.01
SDCBP-205ENST00000447267 USP21Q9UK80 565 aa8.74□□□□□ -1.01
SDCBP-205ENST00000447267 FAM135AQ9P2D6 1515 aa8.74□□□□□ -1.01
SDCBP-205ENST00000447267 NR1I2O75469 434 aa8.73□□□□□ -1.01
SDCBP-205ENST00000447267 LIAT1Q6ZQX7 453 aa8.73□□□□□ -1.01
SDCBP-205ENST00000447267 TXNDC2Q86VQ3 553 aa8.73□□□□□ -1.01
SDCBP-205ENST00000447267 TRPC5Q9UL62 973 aaPredicted RBP8.73□□□□□ -1.01
SDCBP-205ENST00000447267 DEPDC5O75140 1603 aa8.72□□□□□ -1.01
SDCBP-205ENST00000447267 LRRC9Q6ZRR7 1453 aa8.72□□□□□ -1.01
SDCBP-205ENST00000447267 GFRA3O60609 400 aa8.72□□□□□ -1.01
SDCBP-205ENST00000447267 KCNA6P17658 529 aa8.72□□□□□ -1.01
SDCBP-205ENST00000447267 GGCXP38435 758 aa8.72□□□□□ -1.01
SDCBP-205ENST00000447267 CCDC102AQ96A19 550 aa8.72□□□□□ -1.01
SDCBP-205ENST00000447267 UGGT1Q9NYU2 1555 aa8.72□□□□□ -1.01
SDCBP-205ENST00000447267 MIA2Q96PC5 1412 aa8.71□□□□□ -1.01
SDCBP-205ENST00000447267 NWD1Q149M9 1564 aa8.71□□□□□ -1.02
SDCBP-205ENST00000447267 CD46P15529 392 aa8.71□□□□□ -1.02
SDCBP-205ENST00000447267 Q6ZNB5 142 aa8.71□□□□□ -1.02
SDCBP-205ENST00000447267 SLC27A5Q9Y2P5 690 aa8.71□□□□□ -1.02
SDCBP-205ENST00000447267 ITSN2Q9NZM3 1697 aa8.71□□□□□ -1.02
SDCBP-205ENST00000447267 MSH6P52701 1360 aa8.71□□□□□ -1.02
SDCBP-205ENST00000447267 MAP3K1Q13233 1512 aa8.7□□□□□ -1.02
SDCBP-205ENST00000447267 GIGYF1O75420 1035 aaPredicted RBP8.7□□□□□ -1.02
SDCBP-205ENST00000447267 MDM2Q00987 491 aaPredicted RBP8.7□□□□□ -1.02
SDCBP-205ENST00000447267 FAM160A2Q8N612 972 aaPredicted RBP8.7□□□□□ -1.02
SDCBP-205ENST00000447267 ANKLE1Q8NAG6 615 aa8.7□□□□□ -1.02
SDCBP-205ENST00000447267 MINK1Q8N4C8 1332 aaPredicted RBP8.7□□□□□ -1.02
SDCBP-205ENST00000447267 ATP6V1AP38606 617 aa8.69□□□□□ -1.02
SDCBP-205ENST00000447267 SLC19A1P41440 591 aa8.69□□□□□ -1.02
SDCBP-205ENST00000447267 PRELPP51888 382 aa8.69□□□□□ -1.02
SDCBP-205ENST00000447267 COL13A1Q5TAT6 717 aaPredicted RBP8.69□□□□□ -1.02
SDCBP-205ENST00000447267 LMOD2Q6P5Q4 547 aa8.69□□□□□ -1.02
SDCBP-205ENST00000447267 RNF19BQ6ZMZ0 732 aa8.69□□□□□ -1.02
SDCBP-205ENST00000447267 HLA-CQ95604 372 aa8.69□□□□□ -1.02
SDCBP-205ENST00000447267 SLC26A8Q96RN1 970 aa8.69□□□□□ -1.02
SDCBP-205ENST00000447267 SPSB2Q99619 263 aa8.69□□□□□ -1.02
SDCBP-205ENST00000447267 REPIN1Q9BWE0 567 aaKnown RBP8.69□□□□□ -1.02
SDCBP-205ENST00000447267 SLC6A16Q9GZN6 736 aa8.69□□□□□ -1.02
SDCBP-205ENST00000447267 ARHGAP5Q13017 1502 aa8.69□□□□□ -1.02
SDCBP-205ENST00000447267 RSPH4AQ5TD94 716 aa8.68□□□□□ -1.02
SDCBP-205ENST00000447267 PRDM9Q9NQV7 894 aa8.68□□□□□ -1.02
SDCBP-205ENST00000447267 PPP1R1BQ9UD71 204 aaPredicted RBP8.68□□□□□ -1.02
SDCBP-205ENST00000447267 SCAF11Q99590 1463 aaKnown RBP8.68□□□□□ -1.02
SDCBP-205ENST00000447267 CEP350Q5VT06 3117 aa8.68□□□□□ -1.02
SDCBP-205ENST00000447267 NRG2O14511 850 aaPredicted RBP8.67□□□□□ -1.02
SDCBP-205ENST00000447267 SPAG9O60271 1321 aaKnown RBP8.67□□□□□ -1.02
SDCBP-205ENST00000447267 SPRYD7Q5W111 196 aa8.67□□□□□ -1.02
SDCBP-205ENST00000447267 SULF1Q8IWU6 871 aa8.67□□□□□ -1.02
SDCBP-205ENST00000447267 CTTNBP2Q8WZ74 1663 aa8.66□□□□□ -1.02
SDCBP-205ENST00000447267 ATP7AQ04656 1500 aa8.66□□□□□ -1.02
SDCBP-205ENST00000447267 RTEL1-TNFRSF6BF6WH68 1400 aa8.66□□□□□ -1.02
SDCBP-205ENST00000447267 BAG6P46379 1132 aa8.66□□□□□ -1.02
SDCBP-205ENST00000447267 BRICD5Q6PL45 260 aa8.66□□□□□ -1.02
SDCBP-205ENST00000447267 DDX17Q92841 729 aaKnown RBP8.66□□□□□ -1.02
SDCBP-205ENST00000447267 ATP1B4Q9UN42 357 aaPredicted RBP8.66□□□□□ -1.02
SDCBP-205ENST00000447267 EP400Q96L91 3159 aa8.66□□□□□ -1.02
SDCBP-205ENST00000447267 KIDINS220Q9ULH0 1771 aa8.66□□□□□ -1.02
SDCBP-205ENST00000447267 SUPT5HO00267 1087 aaKnown RBP8.65□□□□□ -1.02
SDCBP-205ENST00000447267 HNRNPMP52272 730 aaKnown RBP eCLIP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms