RNA–Protein interactions for RNA: ENST00000446927.5

SEMA4F-206, Transcript of ssemaphorin 4F, humanhuman

TSL 1 (best)

Gene SEMA4F, Length 2,672 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4F-206ENST00000446927 NSD2O96028 1365 aa17.71■□□□□ 0.42
SEMA4F-206ENST00000446927 FBLN1P23142 703 aa17.7■□□□□ 0.42
SEMA4F-206ENST00000446927 THEMISQ8N1K5 641 aaPredicted RBP17.7■□□□□ 0.42
SEMA4F-206ENST00000446927 ZNF692Q9BU19 519 aaPredicted RBP17.7■□□□□ 0.42
SEMA4F-206ENST00000446927 NUTM2FA1L443 756 aa17.69■□□□□ 0.42
SEMA4F-206ENST00000446927 TMEM57Q8N5G2 664 aa17.69■□□□□ 0.42
SEMA4F-206ENST00000446927 PNNQ9H307 717 aaKnown RBP17.69■□□□□ 0.42
SEMA4F-206ENST00000446927 TRIM35Q9UPQ4 493 aa17.69■□□□□ 0.42
SEMA4F-206ENST00000446927 CLCN1P35523 988 aa17.69■□□□□ 0.42
SEMA4F-206ENST00000446927 PLEKHF1Q96S99 279 aa17.69■□□□□ 0.42
SEMA4F-206ENST00000446927 ZMYND15Q9H091 742 aa17.69■□□□□ 0.42
SEMA4F-206ENST00000446927 ZBTB40Q9NUA8 1239 aa17.69■□□□□ 0.42
SEMA4F-206ENST00000446927 CPS1P31327 1500 aa17.68■□□□□ 0.42
SEMA4F-206ENST00000446927 PRR36Q9H6K5 1346 aa17.68■□□□□ 0.42
SEMA4F-206ENST00000446927 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.68■□□□□ 0.422e-7■■■■□ 24.8
SEMA4F-206ENST00000446927 TERF2IPQ9NYB0 399 aa17.68■□□□□ 0.42
SEMA4F-206ENST00000446927 KNDC1Q76NI1 1749 aa17.68■□□□□ 0.42
SEMA4F-206ENST00000446927 FAM135BQ49AJ0 1406 aa17.68■□□□□ 0.42
SEMA4F-206ENST00000446927 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.67■□□□□ 0.42
SEMA4F-206ENST00000446927 RBM25P49756 843 aaKnown RBP17.67■□□□□ 0.42
SEMA4F-206ENST00000446927 IPO8O15397 1037 aaKnown RBP17.67■□□□□ 0.42
SEMA4F-206ENST00000446927 NUDT16Q96DE0 195 aaKnown RBP17.67■□□□□ 0.42
SEMA4F-206ENST00000446927 GRPEL1Q9HAV7 217 aa17.67■□□□□ 0.42
SEMA4F-206ENST00000446927 AMOTL2Q9Y2J4 779 aa17.67■□□□□ 0.42
SEMA4F-206ENST00000446927 ADGRB2O60241 1585 aa17.67■□□□□ 0.42
SEMA4F-206ENST00000446927 NUCB1Q02818 461 aa17.66■□□□□ 0.42
SEMA4F-206ENST00000446927 SNX21Q969T3 373 aa17.66■□□□□ 0.42
SEMA4F-206ENST00000446927 NAP1L5Q96NT1 182 aaPredicted RBP17.66■□□□□ 0.42
SEMA4F-206ENST00000446927 DDIT3P35638 169 aa17.66■□□□□ 0.42
SEMA4F-206ENST00000446927 SIRT1Q96EB6 747 aa17.65■□□□□ 0.42
SEMA4F-206ENST00000446927 ADAMTSL3P82987 1691 aa17.65■□□□□ 0.42
SEMA4F-206ENST00000446927 IL16Q14005 1332 aa17.65■□□□□ 0.42
SEMA4F-206ENST00000446927 CEP170BQ9Y4F5 1589 aaPredicted RBP17.65■□□□□ 0.42
SEMA4F-206ENST00000446927 GLIPR1L2Q4G1C9 344 aa17.65■□□□□ 0.42
SEMA4F-206ENST00000446927 LNPKQ9C0E8 428 aa17.65■□□□□ 0.42
SEMA4F-206ENST00000446927 ISY1Q9ULR0 285 aaKnown RBP17.65■□□□□ 0.42
SEMA4F-206ENST00000446927 PPIP5K1Q6PFW1 1433 aa17.65■□□□□ 0.42
SEMA4F-206ENST00000446927 RIPK4P57078 832 aa17.65■□□□□ 0.42
SEMA4F-206ENST00000446927 HDGFL2Q7Z4V5 671 aaPredicted RBP17.65■□□□□ 0.42
SEMA4F-206ENST00000446927 ZRANB1Q9UGI0 708 aa17.65■□□□□ 0.42
SEMA4F-206ENST00000446927 NCOA3Q9Y6Q9 1424 aa17.64■□□□□ 0.41
SEMA4F-206ENST00000446927 HSP90AB1P08238 724 aaKnown RBP17.64■□□□□ 0.41
SEMA4F-206ENST00000446927 TNPO1Q92973 898 aaKnown RBP17.64■□□□□ 0.41
SEMA4F-206ENST00000446927 KIF16BQ96L93 1317 aa17.64■□□□□ 0.41
SEMA4F-206ENST00000446927 CHD1LQ86WJ1 897 aa17.63■□□□□ 0.41
SEMA4F-206ENST00000446927 TBX22Q9Y458 520 aa17.63■□□□□ 0.41
SEMA4F-206ENST00000446927 CIZ1Q9ULV3 898 aaPredicted RBP17.63■□□□□ 0.41
SEMA4F-206ENST00000446927 GBP4Q96PP9 640 aa17.62■□□□□ 0.41
SEMA4F-206ENST00000446927 ATP7BP35670 1465 aa17.61■□□□□ 0.41
SEMA4F-206ENST00000446927 CPSF1Q10570 1443 aaKnown RBP17.61■□□□□ 0.41
SEMA4F-206ENST00000446927 CCDC61Q9Y6R9 512 aa17.61■□□□□ 0.41
SEMA4F-206ENST00000446927 NME9Q86XW9 330 aa17.6■□□□□ 0.41
SEMA4F-206ENST00000446927 BMP2KLQ5H9B9 411 aa17.6■□□□□ 0.41
SEMA4F-206ENST00000446927 RBM33Q96EV2 1170 aaKnown RBP17.6■□□□□ 0.41
SEMA4F-206ENST00000446927 KCNA6P17658 529 aa17.59■□□□□ 0.41
SEMA4F-206ENST00000446927 ALDH1L2Q3SY69 923 aa17.59■□□□□ 0.41
SEMA4F-206ENST00000446927 HSP90AA1P07900 732 aaKnown RBP17.59■□□□□ 0.41
SEMA4F-206ENST00000446927 RAB3GAP1Q15042 981 aa17.59■□□□□ 0.41
SEMA4F-206ENST00000446927 SKOR2Q2VWA4 1001 aaPredicted RBP17.59■□□□□ 0.41
SEMA4F-206ENST00000446927 ESPNB1AK53 854 aa17.58■□□□□ 0.41
SEMA4F-206ENST00000446927 ANKRD45Q5TZF3 282 aa17.58■□□□□ 0.41
SEMA4F-206ENST00000446927 DIAPH1O60610 1272 aaKnown RBP17.57■□□□□ 0.4
SEMA4F-206ENST00000446927 GAS2L3Q86XJ1 694 aa17.57■□□□□ 0.4
SEMA4F-206ENST00000446927 KIF2CQ99661 725 aa17.57■□□□□ 0.4
SEMA4F-206ENST00000446927 PTMSP20962 102 aa17.56■□□□□ 0.4
SEMA4F-206ENST00000446927 TRIM44Q96DX7 344 aaPredicted RBP17.56■□□□□ 0.4
SEMA4F-206ENST00000446927 COL3A1P02461 1466 aaPredicted RBP17.56■□□□□ 0.4
SEMA4F-206ENST00000446927 ERBB4Q15303 1308 aa17.56■□□□□ 0.4
SEMA4F-206ENST00000446927 ANKRD26Q9UPS8 1709 aa17.55■□□□□ 0.4
SEMA4F-206ENST00000446927 HSP90AA2PQ14568 343 aaPredicted RBP17.55■□□□□ 0.4
SEMA4F-206ENST00000446927 FOXD4L1Q9NU39 408 aa17.55■□□□□ 0.4
SEMA4F-206ENST00000446927 KIF20BQ96Q89 1820 aa17.55■□□□□ 0.4
SEMA4F-206ENST00000446927 GCC1Q96CN9 775 aa17.55■□□□□ 0.4
SEMA4F-206ENST00000446927 CDC42BPGQ6DT37 1551 aa17.54■□□□□ 0.4
SEMA4F-206ENST00000446927 ZBTB7BO15156 539 aaPredicted RBP17.54■□□□□ 0.4
SEMA4F-206ENST00000446927 CHMP4BQ9H444 224 aaKnown RBP17.54■□□□□ 0.4
SEMA4F-206ENST00000446927 K7ELQ4 463 aaPredicted RBP17.54■□□□□ 0.4
SEMA4F-206ENST00000446927 CD2BP2O95400 341 aaKnown RBP17.54■□□□□ 0.4
SEMA4F-206ENST00000446927 ANKLE2Q86XL3 938 aa17.54■□□□□ 0.4
SEMA4F-206ENST00000446927 ACEP12821 1306 aa17.53■□□□□ 0.4
SEMA4F-206ENST00000446927 TBC1D9Q6ZT07 1266 aa17.53■□□□□ 0.4
SEMA4F-206ENST00000446927 ZNF428Q96B54 188 aa17.53■□□□□ 0.4
SEMA4F-206ENST00000446927 EDC4Q6P2E9 1401 aaKnown RBP17.53■□□□□ 0.4
SEMA4F-206ENST00000446927 BRPF1P55201 1214 aaPredicted RBP17.53■□□□□ 0.4
SEMA4F-206ENST00000446927 POLKQ9UBT6 870 aa17.53■□□□□ 0.4
SEMA4F-206ENST00000446927 PTCH1Q13635 1447 aa17.52■□□□□ 0.4
SEMA4F-206ENST00000446927 XRN1Q8IZH2 1706 aaKnown RBP17.52■□□□□ 0.4
SEMA4F-206ENST00000446927 FCHSD2O94868 740 aa17.52■□□□□ 0.4
SEMA4F-206ENST00000446927 C1orf115Q9H7X2 142 aa17.52■□□□□ 0.4
SEMA4F-206ENST00000446927 EMILIN1Q9Y6C2 1016 aa17.52■□□□□ 0.4
SEMA4F-206ENST00000446927 SETD1BQ9UPS6 1966 aaKnown RBP17.52■□□□□ 0.4
SEMA4F-206ENST00000446927 ZNF142P52746 1687 aaPredicted RBP17.51■□□□□ 0.39
SEMA4F-206ENST00000446927 RBM42Q9BTD8 480 aaKnown RBP17.51■□□□□ 0.39
SEMA4F-206ENST00000446927 RGPD8O14715 1765 aaPredicted RBP17.51■□□□□ 0.39
SEMA4F-206ENST00000446927 MON2Q7Z3U7 1717 aa17.51■□□□□ 0.39
SEMA4F-206ENST00000446927 AKAP12Q02952 1782 aa17.5■□□□□ 0.39
SEMA4F-206ENST00000446927 DIP2AQ14689 1571 aa17.5■□□□□ 0.39
SEMA4F-206ENST00000446927 ARHGAP45Q92619 1136 aa17.5■□□□□ 0.39
SEMA4F-206ENST00000446927 GOLGA6L22H0YM25 854 aa17.49■□□□□ 0.39
SEMA4F-206ENST00000446927 RRS1Q15050 365 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms