RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 A0A087WZG4 1122 aa10.21□□□□□ -0.77
PTPN3-204ENST00000446349 TOM1O60784 492 aa10.21□□□□□ -0.77
PTPN3-204ENST00000446349 CABP1Q9NZU7 370 aa10.21□□□□□ -0.77
PTPN3-204ENST00000446349 CHMP5Q9NZZ3 219 aa10.21□□□□□ -0.77
PTPN3-204ENST00000446349 RBM19Q9Y4C8 960 aaKnown RBP10.21□□□□□ -0.77
PTPN3-204ENST00000446349 RAPGEF6Q8TEU7 1601 aa10.21□□□□□ -0.77
PTPN3-204ENST00000446349 PCF11O94913 1555 aaKnown RBP10.21□□□□□ -0.77
PTPN3-204ENST00000446349 WDR97A6NE52 1622 aa10.21□□□□□ -0.78
PTPN3-204ENST00000446349 BTBD11A6QL63 1104 aa10.21□□□□□ -0.78
PTPN3-204ENST00000446349 KRT32Q14532 448 aa10.21□□□□□ -0.78
PTPN3-204ENST00000446349 SULT6B1Q6IMI4 303 aa10.21□□□□□ -0.78
PTPN3-204ENST00000446349 TTC21BQ7Z4L5 1316 aa10.21□□□□□ -0.78
PTPN3-204ENST00000446349 NUDT16Q96DE0 195 aaKnown RBP10.21□□□□□ -0.78
PTPN3-204ENST00000446349 TMOD3Q9NYL9 352 aa10.21□□□□□ -0.78
PTPN3-204ENST00000446349 PIP4K2BP78356 416 aa10.2□□□□□ -0.78
PTPN3-204ENST00000446349 TCP11L2Q8N4U5 519 aa10.2□□□□□ -0.78
PTPN3-204ENST00000446349 DDX54Q8TDD1 881 aaKnown RBP10.2□□□□□ -0.78
PTPN3-204ENST00000446349 PLIN1O60240 522 aa10.2□□□□□ -0.78
PTPN3-204ENST00000446349 PPP2R1AP30153 589 aa10.2□□□□□ -0.78
PTPN3-204ENST00000446349 NCOA1Q15788 1441 aa10.2□□□□□ -0.78
PTPN3-204ENST00000446349 CEP126Q9P2H0 1117 aa10.2□□□□□ -0.78
PTPN3-204ENST00000446349 OFD1O75665 1012 aa10.2□□□□□ -0.78
PTPN3-204ENST00000446349 WASF1Q92558 559 aa10.2□□□□□ -0.78
PTPN3-204ENST00000446349 STIM1Q13586 685 aa10.19□□□□□ -0.78
PTPN3-204ENST00000446349 TMEM132AQ24JP5 1023 aa10.19□□□□□ -0.78
PTPN3-204ENST00000446349 SOGA3Q5TF21 947 aa10.19□□□□□ -0.78
PTPN3-204ENST00000446349 DACH1Q9UI36 760 aa10.19□□□□□ -0.78
PTPN3-204ENST00000446349 ACBD3Q9H3P7 528 aa10.19□□□□□ -0.78
PTPN3-204ENST00000446349 CCP110O43303 1012 aa10.19□□□□□ -0.78
PTPN3-204ENST00000446349 FILIP1LQ4L180 1135 aa10.19□□□□□ -0.78
PTPN3-204ENST00000446349 AEBP1Q8IUX7 1158 aa10.19□□□□□ -0.78
PTPN3-204ENST00000446349 DUOX2Q9NRD8 1548 aa10.19□□□□□ -0.78
PTPN3-204ENST00000446349 SYCP1Q15431 976 aa10.18□□□□□ -0.78
PTPN3-204ENST00000446349 LARP1Q6PKG0 1096 aaKnown RBP10.18□□□□□ -0.78
PTPN3-204ENST00000446349 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.18□□□□□ -0.78
PTPN3-204ENST00000446349 NOL7Q9UMY1 257 aaKnown RBP10.18□□□□□ -0.78
PTPN3-204ENST00000446349 CDK13Q14004 1512 aaKnown RBP10.18□□□□□ -0.78
PTPN3-204ENST00000446349 PPP4R3BQ5MIZ7 849 aa10.18□□□□□ -0.78
PTPN3-204ENST00000446349 LRRCC1Q9C099 1032 aa10.18□□□□□ -0.78
PTPN3-204ENST00000446349 FYB1O15117 783 aa10.18□□□□□ -0.78
PTPN3-204ENST00000446349 ATF7IPQ6VMQ6 1270 aa10.18□□□□□ -0.78
PTPN3-204ENST00000446349 SLC26A8Q96RN1 970 aa10.18□□□□□ -0.78
PTPN3-204ENST00000446349 TNIP1Q15025 636 aa10.18□□□□□ -0.78
PTPN3-204ENST00000446349 MAGEC2Q9UBF1 373 aaPredicted RBP10.18□□□□□ -0.78
PTPN3-204ENST00000446349 PPP1R1BQ9UD71 204 aaPredicted RBP10.18□□□□□ -0.78
PTPN3-204ENST00000446349 ZNF518AQ6AHZ1 1483 aa10.18□□□□□ -0.78
PTPN3-204ENST00000446349 CAVIN4Q5BKX8 364 aa10.18□□□□□ -0.78
PTPN3-204ENST00000446349 SMARCE1Q969G3 411 aa10.18□□□□□ -0.78
PTPN3-204ENST00000446349 RAB11FIP3O75154 756 aa10.17□□□□□ -0.78
PTPN3-204ENST00000446349 GZF1Q9H116 711 aaPredicted RBP10.17□□□□□ -0.78
PTPN3-204ENST00000446349 PDE4AP27815 886 aa10.17□□□□□ -0.78
PTPN3-204ENST00000446349 TNRQ92752 1358 aa10.17□□□□□ -0.78
PTPN3-204ENST00000446349 RABEP1Q15276 862 aa10.17□□□□□ -0.78
PTPN3-204ENST00000446349 BMP2KQ9NSY1 1161 aaPredicted RBP10.17□□□□□ -0.78
PTPN3-204ENST00000446349 CFAP74Q9C0B2 1584 aa10.17□□□□□ -0.78
PTPN3-204ENST00000446349 SETQ01105 290 aaPredicted RBP10.16□□□□□ -0.78
PTPN3-204ENST00000446349 NFE2L2Q16236 605 aa10.16□□□□□ -0.78
PTPN3-204ENST00000446349 CCDC69A6NI79 296 aa10.16□□□□□ -0.78
PTPN3-204ENST00000446349 MBD3O95983 291 aa10.16□□□□□ -0.78
PTPN3-204ENST00000446349 VPS37CA5D8V6 355 aaPredicted RBP10.16□□□□□ -0.78
PTPN3-204ENST00000446349 EHMT1Q9H9B1 1298 aa10.16□□□□□ -0.78
PTPN3-204ENST00000446349 PHF8Q9UPP1 1060 aa10.16□□□□□ -0.78
PTPN3-204ENST00000446349 RBM5P52756 815 aaKnown RBP eCLIP10.16□□□□□ -0.78
PTPN3-204ENST00000446349 EXOC5O00471 708 aa10.16□□□□□ -0.78
PTPN3-204ENST00000446349 EIF2AK4Q9P2K8 1649 aaKnown RBP10.16□□□□□ -0.78
PTPN3-204ENST00000446349 SLC4A2P04920 1241 aa10.16□□□□□ -0.78
PTPN3-204ENST00000446349 IFIT1P09914 478 aaKnown RBP10.16□□□□□ -0.78
PTPN3-204ENST00000446349 MPHOSPH6Q99547 160 aaKnown RBP10.15□□□□□ -0.78
PTPN3-204ENST00000446349 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.15□□□□□ -0.78
PTPN3-204ENST00000446349 DHX29Q7Z478 1369 aaKnown RBP10.15□□□□□ -0.78
PTPN3-204ENST00000446349 KINO60870 393 aaKnown RBP10.15□□□□□ -0.78
PTPN3-204ENST00000446349 TRAF1Q13077 416 aa10.15□□□□□ -0.78
PTPN3-204ENST00000446349 NGLY1Q96IV0 654 aa10.15□□□□□ -0.78
PTPN3-204ENST00000446349 HYPKQ9NX55 129 aa10.15□□□□□ -0.78
PTPN3-204ENST00000446349 TTC21AQ8NDW8 1320 aa10.15□□□□□ -0.78
PTPN3-204ENST00000446349 KRT18P05783 430 aaKnown RBP10.15□□□□□ -0.79
PTPN3-204ENST00000446349 C22orf23Q9BZE7 217 aa10.15□□□□□ -0.79
PTPN3-204ENST00000446349 MPHOSPH10O00566 681 aaKnown RBP10.15□□□□□ -0.79
PTPN3-204ENST00000446349 AK7Q96M32 723 aa10.15□□□□□ -0.79
PTPN3-204ENST00000446349 RPAP2Q8IXW5 612 aaPredicted RBP10.14□□□□□ -0.79
PTPN3-204ENST00000446349 LNPKQ9C0E8 428 aa10.14□□□□□ -0.79
PTPN3-204ENST00000446349 DNAJC2Q99543 621 aaKnown RBP10.14□□□□□ -0.79
PTPN3-204ENST00000446349 SDF4Q9BRK5 362 aa10.14□□□□□ -0.79
PTPN3-204ENST00000446349 SLC12A5Q9H2X9 1139 aa10.14□□□□□ -0.79
PTPN3-204ENST00000446349 CYP46A1Q9Y6A2 500 aa10.14□□□□□ -0.79
PTPN3-204ENST00000446349 NPHP3Q7Z494 1330 aa10.14□□□□□ -0.79
PTPN3-204ENST00000446349 CCDC196A0A1B0GTZ2 297 aa10.14□□□□□ -0.79
PTPN3-204ENST00000446349 CEP131Q9UPN4 1083 aa10.14□□□□□ -0.79
PTPN3-204ENST00000446349 KDM5BQ9UGL1 1544 aa10.14□□□□□ -0.79
PTPN3-204ENST00000446349 SMARCC1Q92922 1105 aaPredicted RBP10.14□□□□□ -0.79
PTPN3-204ENST00000446349 IFT57Q9NWB7 429 aa10.14□□□□□ -0.79
PTPN3-204ENST00000446349 UHRF1BP1LA0JNW5 1464 aa10.13□□□□□ -0.79
PTPN3-204ENST00000446349 NSD3Q9BZ95 1437 aa10.13□□□□□ -0.79
PTPN3-204ENST00000446349 TAF7Q15545 349 aaPredicted RBP10.13□□□□□ -0.79
PTPN3-204ENST00000446349 RPGRQ92834 1020 aaKnown RBP10.13□□□□□ -0.79
PTPN3-204ENST00000446349 UBAC1Q9BSL1 405 aa10.13□□□□□ -0.79
PTPN3-204ENST00000446349 URB2Q14146 1524 aaKnown RBP10.13□□□□□ -0.79
PTPN3-204ENST00000446349 RUFY1Q96T51 708 aa10.13□□□□□ -0.79
PTPN3-204ENST00000446349 ADAMTS8Q9UP79 889 aa10.13□□□□□ -0.79
PTPN3-204ENST00000446349 C11orf95C9JLR9 678 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms