RNA–Protein interactions for RNA: ENST00000445658.6

ERBB2-203, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2 BASIC

Gene ERBB2, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-203ENST00000445658 NME9Q86XW9 330 aa15.85■□□□□ 0.13
ERBB2-203ENST00000445658 MFAP1P55081 439 aaKnown RBP15.85■□□□□ 0.13
ERBB2-203ENST00000445658 THUMPD2Q9BTF0 503 aaKnown RBP15.84■□□□□ 0.13
ERBB2-203ENST00000445658 NAP1L5Q96NT1 182 aaPredicted RBP15.83■□□□□ 0.13
ERBB2-203ENST00000445658 EID1Q9Y6B2 187 aa15.83■□□□□ 0.12
ERBB2-203ENST00000445658 EMILIN1Q9Y6C2 1016 aa15.83■□□□□ 0.12
ERBB2-203ENST00000445658 NUDT16Q96DE0 195 aaKnown RBP15.83■□□□□ 0.12
ERBB2-203ENST00000445658 TBX22Q9Y458 520 aa15.83■□□□□ 0.12
ERBB2-203ENST00000445658 AATKQ6ZMQ8 1374 aa15.82■□□□□ 0.12
ERBB2-203ENST00000445658 WDR63Q8IWG1 891 aa15.82■□□□□ 0.12
ERBB2-203ENST00000445658 CDK12Q9NYV4 1490 aaPredicted RBP15.82■□□□□ 0.12
ERBB2-203ENST00000445658 FOXD4L1Q9NU39 408 aa15.82■□□□□ 0.12
ERBB2-203ENST00000445658 RIPK4P57078 832 aa15.81■□□□□ 0.12
ERBB2-203ENST00000445658 PDE4CQ08493 712 aa15.81■□□□□ 0.12
ERBB2-203ENST00000445658 PLEKHF1Q96S99 279 aa15.81■□□□□ 0.12
ERBB2-203ENST00000445658 CCDC61Q9Y6R9 512 aa15.81■□□□□ 0.12
ERBB2-203ENST00000445658 DIAPH1O60610 1272 aaKnown RBP15.81■□□□□ 0.12
ERBB2-203ENST00000445658 RLBP1P12271 317 aa15.81■□□□□ 0.12
ERBB2-203ENST00000445658 THEMISQ8N1K5 641 aaPredicted RBP15.81■□□□□ 0.12
ERBB2-203ENST00000445658 CHD2O14647 1828 aaKnown RBP15.81■□□□□ 0.12
ERBB2-203ENST00000445658 PCDHB15Q9Y5E8 787 aa15.81■□□□□ 0.12
ERBB2-203ENST00000445658 PRR36Q9H6K5 1346 aa15.8■□□□□ 0.12
ERBB2-203ENST00000445658 PANK2Q9BZ23 570 aa15.8■□□□□ 0.12
ERBB2-203ENST00000445658 PDZRN3Q9UPQ7 1066 aa15.8■□□□□ 0.12
ERBB2-203ENST00000445658 RGPD8O14715 1765 aaPredicted RBP15.8■□□□□ 0.12
ERBB2-203ENST00000445658 LRRC7Q96NW7 1537 aa15.8■□□□□ 0.12
ERBB2-203ENST00000445658 USP54Q70EL1 1684 aa15.8■□□□□ 0.12
ERBB2-203ENST00000445658 FTSJ3Q8IY81 847 aaKnown RBP15.79■□□□□ 0.12
ERBB2-203ENST00000445658 PIK3R4Q99570 1358 aa15.79■□□□□ 0.12
ERBB2-203ENST00000445658 FMN2Q9NZ56 1722 aa15.79■□□□□ 0.12
ERBB2-203ENST00000445658 AEBP2Q6ZN18 517 aaPredicted RBP15.79■□□□□ 0.12
ERBB2-203ENST00000445658 LMOD2Q6P5Q4 547 aa15.79■□□□□ 0.12
ERBB2-203ENST00000445658 ZNF692Q9BU19 519 aaPredicted RBP15.79■□□□□ 0.12
ERBB2-203ENST00000445658 RRAGDQ9NQL2 400 aaPredicted RBP15.79■□□□□ 0.12
ERBB2-203ENST00000445658 USP19O94966 1318 aa15.78■□□□□ 0.12
ERBB2-203ENST00000445658 PRKAR2BP31323 418 aa15.78■□□□□ 0.12
ERBB2-203ENST00000445658 TBC1D2Q9BYX2 928 aa15.78■□□□□ 0.12
ERBB2-203ENST00000445658 SMC4Q9NTJ3 1288 aa15.77■□□□□ 0.12
ERBB2-203ENST00000445658 PLEKHG3A1L390 1219 aa15.77■□□□□ 0.11
ERBB2-203ENST00000445658 LTV1Q96GA3 475 aaPredicted RBP15.77■□□□□ 0.11
ERBB2-203ENST00000445658 EXOSC9Q06265 439 aaKnown RBP15.76■□□□□ 0.11
ERBB2-203ENST00000445658 NGDNQ8NEJ9 315 aaKnown RBP15.76■□□□□ 0.11
ERBB2-203ENST00000445658 COG3Q96JB2 828 aa15.76■□□□□ 0.11
ERBB2-203ENST00000445658 POLKQ9UBT6 870 aa15.76■□□□□ 0.11
ERBB2-203ENST00000445658 SSH2Q76I76 1423 aa15.76■□□□□ 0.11
ERBB2-203ENST00000445658 OVOS2A0A0J9YW53 1432 aa15.75■□□□□ 0.11
ERBB2-203ENST00000445658 OVOS2Q6IE36 1432 aa15.75■□□□□ 0.11
ERBB2-203ENST00000445658 USP6P35125 1406 aa15.74■□□□□ 0.11
ERBB2-203ENST00000445658 RGPD1P0DJD0 1748 aa15.74■□□□□ 0.11
ERBB2-203ENST00000445658 GOLGA6L3A6NEY3 463 aa15.74■□□□□ 0.11
ERBB2-203ENST00000445658 DCTN1Q14203 1278 aa15.74■□□□□ 0.11
ERBB2-203ENST00000445658 FAM43AQ8N2R8 423 aa15.74■□□□□ 0.11
ERBB2-203ENST00000445658 PNNQ9H307 717 aaKnown RBP15.74■□□□□ 0.11
ERBB2-203ENST00000445658 SETD1BQ9UPS6 1966 aaKnown RBP15.74■□□□□ 0.11
ERBB2-203ENST00000445658 MARF1Q9Y4F3 1742 aaKnown RBP15.74■□□□□ 0.11
ERBB2-203ENST00000445658 AMOTL2Q9Y2J4 779 aa15.73■□□□□ 0.11
ERBB2-203ENST00000445658 ANKARQ7Z5J8 1434 aa15.73■□□□□ 0.11
ERBB2-203ENST00000445658 DLG5Q8TDM6 1919 aa15.73■□□□□ 0.11
ERBB2-203ENST00000445658 HSP90AA1P07900 732 aaKnown RBP15.73■□□□□ 0.11
ERBB2-203ENST00000445658 TMPOP42166 694 aaKnown RBP15.73■□□□□ 0.11
ERBB2-203ENST00000445658 ITPRIPQ8IWB1 547 aa15.73■□□□□ 0.11
ERBB2-203ENST00000445658 RSPH6AQ9H0K4 717 aa15.73■□□□□ 0.11
ERBB2-203ENST00000445658 PEAK1Q9H792 1746 aa15.72■□□□□ 0.11
ERBB2-203ENST00000445658 MYH16Q9H6N6 1097 aa15.72■□□□□ 0.11
ERBB2-203ENST00000445658 IL16Q14005 1332 aa15.72■□□□□ 0.11
ERBB2-203ENST00000445658 RARSP54136 660 aaKnown RBP15.72■□□□□ 0.11
ERBB2-203ENST00000445658 RBM10P98175 930 aaKnown RBP15.72■□□□□ 0.11
ERBB2-203ENST00000445658 FCHSD2O94868 740 aa15.72■□□□□ 0.11
ERBB2-203ENST00000445658 PIK3C2AO00443 1686 aa15.71■□□□□ 0.11
ERBB2-203ENST00000445658 PDE3AQ14432 1141 aa15.71■□□□□ 0.11
ERBB2-203ENST00000445658 XRCC6P12956 609 aaKnown RBP eCLIP15.7■□□□□ 0.1
ERBB2-203ENST00000445658 RWDD1Q9H446 243 aaPredicted RBP15.7■□□□□ 0.1
ERBB2-203ENST00000445658 TRIM35Q9UPQ4 493 aa15.7■□□□□ 0.1
ERBB2-203ENST00000445658 USP31Q70CQ4 1352 aa15.7■□□□□ 0.1
ERBB2-203ENST00000445658 FAM83GA6ND36 823 aa15.7■□□□□ 0.1
ERBB2-203ENST00000445658 L1TD1Q5T7N2 865 aaKnown RBP15.7■□□□□ 0.1
ERBB2-203ENST00000445658 ACEP12821 1306 aa15.7■□□□□ 0.1
ERBB2-203ENST00000445658 FGD1P98174 961 aa15.7■□□□□ 0.1
ERBB2-203ENST00000445658 PHACTR3Q96KR7 559 aa15.7■□□□□ 0.1
ERBB2-203ENST00000445658 TTC21BQ7Z4L5 1316 aa15.69■□□□□ 0.1
ERBB2-203ENST00000445658 CT47B1P0C2W7 299 aaPredicted RBP15.69■□□□□ 0.1
ERBB2-203ENST00000445658 IL13P35225 146 aa15.69■□□□□ 0.1
ERBB2-203ENST00000445658 C22orf23Q9BZE7 217 aa15.69■□□□□ 0.1
ERBB2-203ENST00000445658 PDIA4P13667 645 aaKnown RBP15.68■□□□□ 0.1
ERBB2-203ENST00000445658 XPCQ01831 940 aaPredicted RBP15.68■□□□□ 0.1
ERBB2-203ENST00000445658 TRAK2O60296 914 aa15.67■□□□□ 0.1
ERBB2-203ENST00000445658 MCM4P33991 863 aa15.67■□□□□ 0.1
ERBB2-203ENST00000445658 TBC1D32Q96NH3 1257 aa15.67■□□□□ 0.1
ERBB2-203ENST00000445658 TTC21AQ8NDW8 1320 aa15.67■□□□□ 0.1
ERBB2-203ENST00000445658 AEBP1Q8IUX7 1158 aa15.66■□□□□ 0.1
ERBB2-203ENST00000445658 BCL11BQ9C0K0 894 aaPredicted RBP15.66■□□□□ 0.1
ERBB2-203ENST00000445658 NWD1Q149M9 1564 aa15.66■□□□□ 0.1
ERBB2-203ENST00000445658 SULT6B1Q6IMI4 303 aa15.66■□□□□ 0.1
ERBB2-203ENST00000445658 LNPKQ9C0E8 428 aa15.66■□□□□ 0.1
ERBB2-203ENST00000445658 HSCBQ8IWL3 235 aa15.65■□□□□ 0.1
ERBB2-203ENST00000445658 AMPHP49418 695 aa15.64■□□□□ 0.09
ERBB2-203ENST00000445658 AAMPQ13685 434 aa15.64■□□□□ 0.09
ERBB2-203ENST00000445658 SSH1Q8WYL5 1049 aa15.64■□□□□ 0.09
ERBB2-203ENST00000445658 MIS18AQ9NYP9 233 aa15.64■□□□□ 0.09
ERBB2-203ENST00000445658 HSP90AB2PQ58FF8 381 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms