RNA–Protein interactions for RNA: ENST00000445569.6

CALD1-211, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-211ENST00000445569 ZRANB1Q9UGI0 708 aa13.59□□□□□ -0.23
CALD1-211ENST00000445569 TRPM3Q9HCF6 1732 aaPredicted RBP13.59□□□□□ -0.23
CALD1-211ENST00000445569 LTN1O94822 1766 aa13.58□□□□□ -0.23
CALD1-211ENST00000445569 TMPOP42166 694 aaKnown RBP13.58□□□□□ -0.24
CALD1-211ENST00000445569 NEUROD2Q15784 382 aa13.58□□□□□ -0.24
CALD1-211ENST00000445569 C19orf44Q9H6X5 657 aa13.58□□□□□ -0.24
CALD1-211ENST00000445569 PRKAR2BP31323 418 aa13.57□□□□□ -0.24
CALD1-211ENST00000445569 RRS1Q15050 365 aaKnown RBP13.57□□□□□ -0.24
CALD1-211ENST00000445569 RRP7AQ9Y3A4 280 aaKnown RBP13.57□□□□□ -0.24
CALD1-211ENST00000445569 C1orf167Q5SNV9 1468 aa13.56□□□□□ -0.24
CALD1-211ENST00000445569 SLIT3O75094 1523 aa13.56□□□□□ -0.24
CALD1-211ENST00000445569 NFAT5O94916 1531 aa13.56□□□□□ -0.24
CALD1-211ENST00000445569 DLG5Q8TDM6 1919 aa13.56□□□□□ -0.24
CALD1-211ENST00000445569 NFE2L2Q16236 605 aa13.55□□□□□ -0.24
CALD1-211ENST00000445569 CADPS2Q86UW7 1296 aa13.55□□□□□ -0.24
CALD1-211ENST00000445569 CCDC136Q96JN2 1154 aa13.55□□□□□ -0.24
CALD1-211ENST00000445569 MST1RQ04912 1400 aa13.55□□□□□ -0.24
CALD1-211ENST00000445569 ATF3P18847 181 aa13.54□□□□□ -0.24
CALD1-211ENST00000445569 NLRP6P59044 892 aa13.54□□□□□ -0.24
CALD1-211ENST00000445569 MAP3K19Q56UN5 1328 aa13.54□□□□□ -0.24
CALD1-211ENST00000445569 ALS2Q96Q42 1657 aa13.53□□□□□ -0.24
CALD1-211ENST00000445569 RIPK4P57078 832 aa13.53□□□□□ -0.24
CALD1-211ENST00000445569 EIF4A2Q14240 407 aaKnown RBP13.53□□□□□ -0.24
CALD1-211ENST00000445569 ESCO1Q5FWF5 840 aa13.53□□□□□ -0.24
CALD1-211ENST00000445569 SPINK5Q9NQ38 1064 aaPredicted RBP13.53□□□□□ -0.24
CALD1-211ENST00000445569 SOCS7O14512 581 aa13.52□□□□□ -0.25
CALD1-211ENST00000445569 AMPHP49418 695 aa13.52□□□□□ -0.25
CALD1-211ENST00000445569 ABTB2Q8N961 1025 aa13.52□□□□□ -0.25
CALD1-211ENST00000445569 KCNH5Q8NCM2 988 aa13.52□□□□□ -0.25
CALD1-211ENST00000445569 FANCIQ9NVI1 1328 aa13.52□□□□□ -0.25
CALD1-211ENST00000445569 ABCC6O95255 1503 aa13.51□□□□□ -0.25
CALD1-211ENST00000445569 KDRP35968 1356 aa13.51□□□□□ -0.25
CALD1-211ENST00000445569 PAK3O75914 559 aaPredicted RBP13.51□□□□□ -0.25
CALD1-211ENST00000445569 HMOX1P09601 288 aa13.51□□□□□ -0.25
CALD1-211ENST00000445569 PSME1Q06323 249 aa13.51□□□□□ -0.25
CALD1-211ENST00000445569 TRIM35Q9UPQ4 493 aa13.51□□□□□ -0.25
CALD1-211ENST00000445569 XIRP1Q702N8 1843 aaKnown RBP13.5□□□□□ -0.25
CALD1-211ENST00000445569 IGSF1Q8N6C5 1336 aa13.5□□□□□ -0.25
CALD1-211ENST00000445569 FBLN1P23142 703 aa13.5□□□□□ -0.25
CALD1-211ENST00000445569 CANXP27824 592 aaKnown RBP13.5□□□□□ -0.25
CALD1-211ENST00000445569 B4GALNT3Q6L9W6 998 aa13.5□□□□□ -0.25
CALD1-211ENST00000445569 MED1Q15648 1581 aaPredicted RBP13.49□□□□□ -0.25
CALD1-211ENST00000445569 PDE3AQ14432 1141 aa13.49□□□□□ -0.25
CALD1-211ENST00000445569 EXOC6Q8TAG9 804 aa13.49□□□□□ -0.25
CALD1-211ENST00000445569 ZNF428Q96B54 188 aa13.49□□□□□ -0.25
CALD1-211ENST00000445569 CAMTA1Q9Y6Y1 1673 aa13.49□□□□□ -0.25
CALD1-211ENST00000445569 LRRC37A3O60309 1634 aa13.49□□□□□ -0.25
CALD1-211ENST00000445569 USP19O94966 1318 aa13.48□□□□□ -0.25
CALD1-211ENST00000445569 FAM208AQ9UK61 1670 aaKnown RBP13.48□□□□□ -0.25
CALD1-211ENST00000445569 MS4A1P11836 297 aa13.48□□□□□ -0.25
CALD1-211ENST00000445569 GNAI1P63096 354 aa13.48□□□□□ -0.25
CALD1-211ENST00000445569 AAMPQ13685 434 aa13.48□□□□□ -0.25
CALD1-211ENST00000445569 HSP90AB2PQ58FF8 381 aa13.48□□□□□ -0.25
CALD1-211ENST00000445569 IFT57Q9NWB7 429 aa13.48□□□□□ -0.25
CALD1-211ENST00000445569 SOX12O15370 315 aa13.47□□□□□ -0.25
CALD1-211ENST00000445569 HOXC9P31274 260 aa13.47□□□□□ -0.25
CALD1-211ENST00000445569 RARSP54136 660 aaKnown RBP13.47□□□□□ -0.25
CALD1-211ENST00000445569 SULT6B1Q6IMI4 303 aa13.47□□□□□ -0.25
CALD1-211ENST00000445569 BRINP3Q76B58 766 aa13.47□□□□□ -0.25
CALD1-211ENST00000445569 NPHP3Q7Z494 1330 aa13.46□□□□□ -0.25
CALD1-211ENST00000445569 PLIN1O60240 522 aa13.46□□□□□ -0.25
CALD1-211ENST00000445569 POTEDQ86YR6 584 aa13.46□□□□□ -0.25
CALD1-211ENST00000445569 CRBNQ96SW2 442 aa13.46□□□□□ -0.25
CALD1-211ENST00000445569 KIF16BQ96L93 1317 aa13.45□□□□□ -0.26
CALD1-211ENST00000445569 HAP1P54257 671 aaPredicted RBP13.45□□□□□ -0.26
CALD1-211ENST00000445569 GAS2L2Q8NHY3 880 aa13.45□□□□□ -0.26
CALD1-211ENST00000445569 RGS17Q9UGC6 210 aaPredicted RBP13.45□□□□□ -0.26
CALD1-211ENST00000445569 TNS3Q68CZ2 1445 aa13.45□□□□□ -0.26
CALD1-211ENST00000445569 JCADQ9P266 1359 aa13.45□□□□□ -0.26
CALD1-211ENST00000445569 PHACTR3Q96KR7 559 aa13.44□□□□□ -0.26
CALD1-211ENST00000445569 ORAI2Q96SN7 254 aa13.44□□□□□ -0.26
CALD1-211ENST00000445569 CRYBG1Q9Y4K1 1723 aa13.44□□□□□ -0.26
CALD1-211ENST00000445569 PXDNQ92626 1479 aa13.43□□□□□ -0.26
CALD1-211ENST00000445569 BCAR3O75815 825 aa13.43□□□□□ -0.26
CALD1-211ENST00000445569 EXOSC9Q06265 439 aaKnown RBP13.43□□□□□ -0.26
CALD1-211ENST00000445569 ALDH1L2Q3SY69 923 aa13.43□□□□□ -0.26
CALD1-211ENST00000445569 NUTM2GQ5VZR2 741 aa13.43□□□□□ -0.26
CALD1-211ENST00000445569 KRT28Q7Z3Y7 464 aa13.43□□□□□ -0.26
CALD1-211ENST00000445569 AEBP1Q8IUX7 1158 aa13.43□□□□□ -0.26
CALD1-211ENST00000445569 IP6K1Q92551 441 aa13.43□□□□□ -0.26
CALD1-211ENST00000445569 TSR2Q969E8 191 aaKnown RBP13.43□□□□□ -0.26
CALD1-211ENST00000445569 NCAPD2Q15021 1401 aa13.42□□□□□ -0.26
CALD1-211ENST00000445569 FOXO3O43524 673 aa13.42□□□□□ -0.26
CALD1-211ENST00000445569 SMC4Q9NTJ3 1288 aa13.42□□□□□ -0.26
CALD1-211ENST00000445569 ROBO1Q9Y6N7 1651 aa13.42□□□□□ -0.26
CALD1-211ENST00000445569 PLEKHG2Q9H7P9 1386 aa13.42□□□□□ -0.26
CALD1-211ENST00000445569 HTATSF1O43719 755 aaKnown RBP13.41□□□□□ -0.26
CALD1-211ENST00000445569 CFAP44Q96MT7 982 aa13.41□□□□□ -0.26
CALD1-211ENST00000445569 EYA1Q99502 592 aa13.41□□□□□ -0.26
CALD1-211ENST00000445569 LMO7Q8WWI1 1683 aa13.4□□□□□ -0.26
CALD1-211ENST00000445569 ZNF853P0CG23 659 aa13.4□□□□□ -0.26
CALD1-211ENST00000445569 C20orf194Q5TEA3 1177 aa13.4□□□□□ -0.26
CALD1-211ENST00000445569 ZKSCAN2Q63HK3 967 aa13.4□□□□□ -0.26
CALD1-211ENST00000445569 TSHZ2Q9NRE2 1034 aa13.4□□□□□ -0.26
CALD1-211ENST00000445569 SPATA31A6Q5VVP1 1343 aa13.39□□□□□ -0.27
CALD1-211ENST00000445569 NHSL1Q5SYE7 1610 aa13.39□□□□□ -0.27
CALD1-211ENST00000445569 IPO8O15397 1037 aaKnown RBP13.39□□□□□ -0.27
CALD1-211ENST00000445569 BRPF1P55201 1214 aaPredicted RBP13.39□□□□□ -0.27
CALD1-211ENST00000445569 CENPQQ7L2Z9 268 aaPredicted RBP13.39□□□□□ -0.27
CALD1-211ENST00000445569 RTF1Q92541 710 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms