RNA–Protein interactions for RNA: ENST00000445346.1

LINC02549-201, Transcript of long intergenic non-protein coding RNA 2549, humanhuman

TSL 1 (best) BASIC

Gene LINC02549, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02549-201ENST00000445346 CDC42BPGQ6DT37 1551 aa11.84□□□□□ -0.51
LINC02549-201ENST00000445346 PSME1Q06323 249 aa11.83□□□□□ -0.52
LINC02549-201ENST00000445346 LMOD2Q6P5Q4 547 aa11.83□□□□□ -0.52
LINC02549-201ENST00000445346 GPHNQ9NQX3 736 aaPredicted RBP11.83□□□□□ -0.52
LINC02549-201ENST00000445346 RYDENQ9NUL5 291 aaKnown RBP11.83□□□□□ -0.52
LINC02549-201ENST00000445346 CCDC144AA2RUR9 1427 aa11.83□□□□□ -0.52
LINC02549-201ENST00000445346 SPATA31A3Q5VYP0 1347 aa11.83□□□□□ -0.52
LINC02549-201ENST00000445346 KHSRPQ92945 711 aaKnown RBP eCLIP11.82□□□□□ -0.52
LINC02549-201ENST00000445346 BLMP54132 1417 aaPredicted RBP11.82□□□□□ -0.52
LINC02549-201ENST00000445346 ABCC11Q96J66 1382 aa11.81□□□□□ -0.52
LINC02549-201ENST00000445346 ANKRD30BQ9BXX2 1392 aa11.81□□□□□ -0.52
LINC02549-201ENST00000445346 DEFB132Q7Z7B7 95 aa11.81□□□□□ -0.52
LINC02549-201ENST00000445346 SEPT12Q8IYM1 358 aa11.81□□□□□ -0.52
LINC02549-201ENST00000445346 TSHZ2Q9NRE2 1034 aa11.81□□□□□ -0.52
LINC02549-201ENST00000445346 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.81□□□□□ -0.52
LINC02549-201ENST00000445346 PPLO60437 1756 aa11.81□□□□□ -0.52
LINC02549-201ENST00000445346 RALGAPBQ86X10 1494 aa11.81□□□□□ -0.52
LINC02549-201ENST00000445346 PLEKHH1Q9ULM0 1364 aa11.8□□□□□ -0.52
LINC02549-201ENST00000445346 A0A0G2JS52 829 aa11.8□□□□□ -0.52
LINC02549-201ENST00000445346 POTEB3A0JP26 581 aa11.8□□□□□ -0.52
LINC02549-201ENST00000445346 FOXK1P85037 733 aa11.8□□□□□ -0.52
LINC02549-201ENST00000445346 MYT1Q01538 1121 aa11.8□□□□□ -0.52
LINC02549-201ENST00000445346 POTEBQ6S5H4 581 aa11.8□□□□□ -0.52
LINC02549-201ENST00000445346 CABLES1Q8TDN4 633 aa11.8□□□□□ -0.52
LINC02549-201ENST00000445346 TECPR2O15040 1411 aa11.79□□□□□ -0.52
LINC02549-201ENST00000445346 VPS72Q15906 364 aa11.79□□□□□ -0.52
LINC02549-201ENST00000445346 MPHOSPH9Q99550 1183 aa11.79□□□□□ -0.52
LINC02549-201ENST00000445346 SLIT2O94813 1529 aa11.79□□□□□ -0.52
LINC02549-201ENST00000445346 MARF1Q9Y4F3 1742 aaKnown RBP11.78□□□□□ -0.52
LINC02549-201ENST00000445346 SAFB2Q14151 953 aaKnown RBP eCLIP11.78□□□□□ -0.52
LINC02549-201ENST00000445346 KRT27Q7Z3Y8 459 aa11.78□□□□□ -0.52
LINC02549-201ENST00000445346 TMC2Q8TDI7 906 aa11.78□□□□□ -0.52
LINC02549-201ENST00000445346 MARVELD3Q96A59 401 aa11.78□□□□□ -0.52
LINC02549-201ENST00000445346 SIRT1Q96EB6 747 aa11.78□□□□□ -0.52
LINC02549-201ENST00000445346 YTHDC2Q9H6S0 1430 aaKnown RBP11.77□□□□□ -0.52
LINC02549-201ENST00000445346 MFSD10Q14728 455 aa11.77□□□□□ -0.53
LINC02549-201ENST00000445346 GPR153Q6NV75 609 aa11.77□□□□□ -0.53
LINC02549-201ENST00000445346 PLPP6Q8IY26 295 aa11.77□□□□□ -0.53
LINC02549-201ENST00000445346 DHX57Q6P158 1386 aaKnown RBP11.77□□□□□ -0.53
LINC02549-201ENST00000445346 EP400Q96L91 3159 aa11.77□□□□□ -0.53
LINC02549-201ENST00000445346 POGKQ9P215 609 aa11.76□□□□□ -0.53
LINC02549-201ENST00000445346 TNS3Q68CZ2 1445 aa11.76□□□□□ -0.53
LINC02549-201ENST00000445346 GLI3P10071 1580 aa11.75□□□□□ -0.53
LINC02549-201ENST00000445346 KIF1AQ12756 1690 aa11.75□□□□□ -0.53
LINC02549-201ENST00000445346 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.75□□□□□ -0.53
LINC02549-201ENST00000445346 FAM83GA6ND36 823 aa11.75□□□□□ -0.53
LINC02549-201ENST00000445346 ONECUT3O60422 494 aaPredicted RBP11.75□□□□□ -0.53
LINC02549-201ENST00000445346 BAG6P46379 1132 aa11.75□□□□□ -0.53
LINC02549-201ENST00000445346 PMFBP1Q8TBY8 1022 aa11.75□□□□□ -0.53
LINC02549-201ENST00000445346 PRAM1Q96QH2 718 aa11.75□□□□□ -0.53
LINC02549-201ENST00000445346 C14orf93Q9H972 538 aaKnown RBP11.75□□□□□ -0.53
LINC02549-201ENST00000445346 ARHGEF10O15013 1369 aa11.75□□□□□ -0.53
LINC02549-201ENST00000445346 PIK3C2GO75747 1445 aa11.75□□□□□ -0.53
LINC02549-201ENST00000445346 SPATA31E1Q6ZUB1 1445 aa11.75□□□□□ -0.53
LINC02549-201ENST00000445346 USP32Q8NFA0 1604 aa11.75□□□□□ -0.53
LINC02549-201ENST00000445346 POTEMA6NI47 508 aa11.74□□□□□ -0.53
LINC02549-201ENST00000445346 PLCB2Q00722 1185 aa11.74□□□□□ -0.53
LINC02549-201ENST00000445346 CFAP70Q5T0N1 1121 aa11.74□□□□□ -0.53
LINC02549-201ENST00000445346 POTEGQ6S5H5 508 aa11.74□□□□□ -0.53
LINC02549-201ENST00000445346 LARP6Q9BRS8 491 aaKnown RBP11.74□□□□□ -0.53
LINC02549-201ENST00000445346 SBNO1A3KN83 1393 aa11.74□□□□□ -0.53
LINC02549-201ENST00000445346 PSDA5PKW4 1024 aaPredicted RBP11.73□□□□□ -0.53
LINC02549-201ENST00000445346 FAM98CQ17RN3 349 aaKnown RBP11.73□□□□□ -0.53
LINC02549-201ENST00000445346 PPP1R15BQ5SWA1 713 aa11.73□□□□□ -0.53
LINC02549-201ENST00000445346 FMN2Q9NZ56 1722 aa11.73□□□□□ -0.53
LINC02549-201ENST00000445346 ARSIQ5FYB1 569 aa11.72□□□□□ -0.53
LINC02549-201ENST00000445346 BTG4Q9NY30 223 aa11.72□□□□□ -0.53
LINC02549-201ENST00000445346 KNDC1Q76NI1 1749 aa11.72□□□□□ -0.53
LINC02549-201ENST00000445346 NRXN1Q9ULB1 1477 aa11.71□□□□□ -0.53
LINC02549-201ENST00000445346 GPRASP1Q5JY77 1395 aa11.7□□□□□ -0.54
LINC02549-201ENST00000445346 BRWD3Q6RI45 1802 aa11.7□□□□□ -0.54
LINC02549-201ENST00000445346 HOXB1P14653 301 aaPredicted RBP11.7□□□□□ -0.54
LINC02549-201ENST00000445346 HIRIP3Q9BW71 556 aaPredicted RBP11.7□□□□□ -0.54
LINC02549-201ENST00000445346 EMILIN3Q9NT22 766 aa11.7□□□□□ -0.54
LINC02549-201ENST00000445346 ACIN1Q9UKV3 1341 aaKnown RBP11.69□□□□□ -0.54
LINC02549-201ENST00000445346 SNPHO15079 494 aa11.69□□□□□ -0.54
LINC02549-201ENST00000445346 HRCP23327 699 aa11.69□□□□□ -0.54
LINC02549-201ENST00000445346 EN1Q05925 392 aaPredicted RBP11.69□□□□□ -0.54
LINC02549-201ENST00000445346 DOK7Q18PE1 504 aa11.69□□□□□ -0.54
LINC02549-201ENST00000445346 NGDNQ8NEJ9 315 aaKnown RBP11.69□□□□□ -0.54
LINC02549-201ENST00000445346 TRAK1Q9UPV9 953 aa11.69□□□□□ -0.54
LINC02549-201ENST00000445346 MINK1Q8N4C8 1332 aaPredicted RBP11.68□□□□□ -0.54
LINC02549-201ENST00000445346 SLC34A2O95436 690 aa11.68□□□□□ -0.54
LINC02549-201ENST00000445346 PDE4AP27815 886 aa11.68□□□□□ -0.54
LINC02549-201ENST00000445346 FAM182BQ5T319 152 aa11.68□□□□□ -0.54
LINC02549-201ENST00000445346 RGPD8O14715 1765 aaPredicted RBP11.68□□□□□ -0.54
LINC02549-201ENST00000445346 IFT172Q9UG01 1749 aa11.68□□□□□ -0.54
LINC02549-201ENST00000445346 ANKARQ7Z5J8 1434 aa11.68□□□□□ -0.54
LINC02549-201ENST00000445346 NWD2Q9ULI1 1742 aa11.67□□□□□ -0.54
LINC02549-201ENST00000445346 DDX27Q96GQ7 796 aaKnown RBP11.67□□□□□ -0.54
LINC02549-201ENST00000445346 PCDHGA4Q9Y5G9 962 aa11.67□□□□□ -0.54
LINC02549-201ENST00000445346 PLCH1Q4KWH8 1693 aa11.67□□□□□ -0.54
LINC02549-201ENST00000445346 EIF3AQ14152 1382 aaKnown RBP11.67□□□□□ -0.54
LINC02549-201ENST00000445346 R3HDM1Q15032 1099 aaKnown RBP11.66□□□□□ -0.54
LINC02549-201ENST00000445346 PRDM11Q9NQV5 511 aa11.66□□□□□ -0.54
LINC02549-201ENST00000445346 KDM2AQ9Y2K7 1162 aa11.66□□□□□ -0.54
LINC02549-201ENST00000445346 SPATA31A5Q5VU36 1347 aa11.65□□□□□ -0.54
LINC02549-201ENST00000445346 SPATA31A7Q8IWB4 1347 aa11.65□□□□□ -0.54
LINC02549-201ENST00000445346 WASLO00401 505 aaPredicted RBP11.65□□□□□ -0.54
LINC02549-201ENST00000445346 PTCD2Q8WV60 388 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms