RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 EFCAB6Q5THR3 1501 aa12.37□□□□□ -0.43
CASP4-203ENST00000444739 SIRT2Q8IXJ6 389 aa12.37□□□□□ -0.43
CASP4-203ENST00000444739 RBM27Q9P2N5 1060 aaKnown RBP12.37□□□□□ -0.43
CASP4-203ENST00000444739 CCDC39Q9UFE4 941 aa12.37□□□□□ -0.43
CASP4-203ENST00000444739 U2SURPO15042 1029 aaKnown RBP12.36□□□□□ -0.43
CASP4-203ENST00000444739 GSPT1P15170 499 aaKnown RBP12.36□□□□□ -0.43
CASP4-203ENST00000444739 KCNA4P22459 653 aa12.36□□□□□ -0.43
CASP4-203ENST00000444739 LRSAM1Q6UWE0 723 aa12.36□□□□□ -0.43
CASP4-203ENST00000444739 AFAP1Q8N556 730 aa12.36□□□□□ -0.43
CASP4-203ENST00000444739 TULP4Q9NRJ4 1543 aa12.36□□□□□ -0.43
CASP4-203ENST00000444739 PRPF40AO75400 957 aaKnown RBP12.36□□□□□ -0.43
CASP4-203ENST00000444739 PTCH1Q13635 1447 aa12.36□□□□□ -0.43
CASP4-203ENST00000444739 C1orf115Q9H7X2 142 aa12.36□□□□□ -0.43
CASP4-203ENST00000444739 PODXL2Q9NZ53 605 aa12.36□□□□□ -0.43
CASP4-203ENST00000444739 ATP7AQ04656 1500 aa12.36□□□□□ -0.43
CASP4-203ENST00000444739 CWC22Q9HCG8 908 aaKnown RBP12.35□□□□□ -0.43
CASP4-203ENST00000444739 TMEM63CQ9P1W3 806 aa12.35□□□□□ -0.43
CASP4-203ENST00000444739 ZDHHC9Q9Y397 364 aa12.35□□□□□ -0.43
CASP4-203ENST00000444739 PUS7Q96PZ0 661 aaKnown RBP12.35□□□□□ -0.43
CASP4-203ENST00000444739 C14orf93Q9H972 538 aaKnown RBP12.35□□□□□ -0.43
CASP4-203ENST00000444739 ANKRD26Q9UPS8 1709 aa12.34□□□□□ -0.43
CASP4-203ENST00000444739 ZCCHC11Q5TAX3 1644 aaKnown RBP12.34□□□□□ -0.43
CASP4-203ENST00000444739 ARHGEF28Q8N1W1 1705 aaKnown RBP12.34□□□□□ -0.43
CASP4-203ENST00000444739 USP26Q9BXU7 913 aa12.34□□□□□ -0.43
CASP4-203ENST00000444739 CHMP4BQ9H444 224 aaKnown RBP12.34□□□□□ -0.43
CASP4-203ENST00000444739 FANCAO15360 1455 aa12.34□□□□□ -0.43
CASP4-203ENST00000444739 SYCE3A1L190 88 aa12.33□□□□□ -0.44
CASP4-203ENST00000444739 ZNF428Q96B54 188 aa12.33□□□□□ -0.44
CASP4-203ENST00000444739 KNDC1Q76NI1 1749 aa12.33□□□□□ -0.44
CASP4-203ENST00000444739 KIF3BO15066 747 aa12.33□□□□□ -0.44
CASP4-203ENST00000444739 PLEKHM2Q8IWE5 1019 aa12.33□□□□□ -0.44
CASP4-203ENST00000444739 ZGPATQ8N5A5 531 aaKnown RBP12.33□□□□□ -0.44
CASP4-203ENST00000444739 ARHGAP45Q92619 1136 aa12.33□□□□□ -0.44
CASP4-203ENST00000444739 ARAP3Q8WWN8 1544 aa12.33□□□□□ -0.44
CASP4-203ENST00000444739 MRPL50Q8N5N7 158 aaKnown RBP12.32□□□□□ -0.44
CASP4-203ENST00000444739 CFAP44Q96MT7 982 aa12.32□□□□□ -0.44
CASP4-203ENST00000444739 ARID3AQ99856 593 aa12.32□□□□□ -0.44
CASP4-203ENST00000444739 CCDC94Q9BW85 323 aaPredicted RBP12.32□□□□□ -0.44
CASP4-203ENST00000444739 NSFL1CQ9UNZ2 370 aaKnown RBP12.32□□□□□ -0.44
CASP4-203ENST00000444739 ABCC4O15439 1325 aa12.32□□□□□ -0.44
CASP4-203ENST00000444739 GLI2P10070 1586 aa12.32□□□□□ -0.44
CASP4-203ENST00000444739 EVC2Q86UK5 1308 aa12.31□□□□□ -0.44
CASP4-203ENST00000444739 TTC22Q5TAA0 569 aa12.31□□□□□ -0.44
CASP4-203ENST00000444739 TMEM132EQ6IEE7 984 aa12.31□□□□□ -0.44
CASP4-203ENST00000444739 DMTNQ08495 405 aa12.3□□□□□ -0.44
CASP4-203ENST00000444739 UTP14CQ5TAP6 766 aaKnown RBP12.3□□□□□ -0.44
CASP4-203ENST00000444739 MYRIPQ8NFW9 859 aa12.3□□□□□ -0.44
CASP4-203ENST00000444739 CHAMP1Q96JM3 812 aa12.3□□□□□ -0.44
CASP4-203ENST00000444739 PRDM10Q9NQV6 1147 aa12.3□□□□□ -0.44
CASP4-203ENST00000444739 LRRC7Q96NW7 1537 aa12.3□□□□□ -0.44
CASP4-203ENST00000444739 ERCC6L2Q5T890 1561 aa12.3□□□□□ -0.44
CASP4-203ENST00000444739 CDC42BPGQ6DT37 1551 aa12.3□□□□□ -0.44
CASP4-203ENST00000444739 A0A1W2PP64 1363 aa12.3□□□□□ -0.44
CASP4-203ENST00000444739 ST18O60284 1047 aa12.29□□□□□ -0.44
CASP4-203ENST00000444739 VAMP4O75379 141 aa12.29□□□□□ -0.44
CASP4-203ENST00000444739 MBD3O95983 291 aa12.29□□□□□ -0.44
CASP4-203ENST00000444739 KIAA2012Q0VF49 1180 aa12.29□□□□□ -0.44
CASP4-203ENST00000444739 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.29□□□□□ -0.44
CASP4-203ENST00000444739 LMTK2Q8IWU2 1503 aa12.29□□□□□ -0.44
CASP4-203ENST00000444739 INTS3Q68E01 1043 aaKnown RBP12.29□□□□□ -0.44
CASP4-203ENST00000444739 RNF214Q8ND24 703 aa12.29□□□□□ -0.44
CASP4-203ENST00000444739 YEATS2Q9ULM3 1422 aa12.28□□□□□ -0.44
CASP4-203ENST00000444739 ZSCAN20P17040 1043 aaPredicted RBP12.28□□□□□ -0.44
CASP4-203ENST00000444739 GGNBP2Q9H3C7 697 aa12.28□□□□□ -0.44
CASP4-203ENST00000444739 PNPLA6Q8IY17 1366 aa12.28□□□□□ -0.44
CASP4-203ENST00000444739 CHD1O14646 1710 aa12.28□□□□□ -0.44
CASP4-203ENST00000444739 DCTPP1Q9H773 170 aa12.28□□□□□ -0.44
CASP4-203ENST00000444739 CABP2Q9NPB3 220 aa12.28□□□□□ -0.44
CASP4-203ENST00000444739 ZHX1Q9UKY1 873 aaPredicted RBP12.28□□□□□ -0.44
CASP4-203ENST00000444739 DIAPH1O60610 1272 aaKnown RBP12.27□□□□□ -0.45
CASP4-203ENST00000444739 MAPK8IP2Q13387 824 aaPredicted RBP12.27□□□□□ -0.45
CASP4-203ENST00000444739 ZNF710Q8N1W2 664 aa12.27□□□□□ -0.45
CASP4-203ENST00000444739 FAM135BQ49AJ0 1406 aa12.27□□□□□ -0.45
CASP4-203ENST00000444739 CAMSAP1Q5T5Y3 1602 aa12.27□□□□□ -0.45
CASP4-203ENST00000444739 GTF2F1P35269 517 aaKnown RBP eCLIP12.26□□□□□ -0.45
CASP4-203ENST00000444739 TSPYL6Q8N831 410 aa12.26□□□□□ -0.45
CASP4-203ENST00000444739 PRIMPOLQ96LW4 560 aa12.26□□□□□ -0.45
CASP4-203ENST00000444739 TSPY26PQ9H489 355 aa12.26□□□□□ -0.45
CASP4-203ENST00000444739 PTMAP06454 111 aaKnown RBP12.26□□□□□ -0.45
CASP4-203ENST00000444739 CHGAP10645 457 aaKnown RBP12.26□□□□□ -0.45
CASP4-203ENST00000444739 ABCA9Q8IUA7 1624 aa12.26□□□□□ -0.45
CASP4-203ENST00000444739 C16orf71Q8IYS4 520 aaPredicted RBP12.26□□□□□ -0.45
CASP4-203ENST00000444739 JARID2Q92833 1246 aaPredicted RBP12.26□□□□□ -0.45
CASP4-203ENST00000444739 KIF24Q5T7B8 1368 aa12.25□□□□□ -0.45
CASP4-203ENST00000444739 SDSP20132 328 aa12.25□□□□□ -0.45
CASP4-203ENST00000444739 CFAP65Q6ZU64 1925 aaKnown RBP12.25□□□□□ -0.45
CASP4-203ENST00000444739 FYB1O15117 783 aa12.25□□□□□ -0.45
CASP4-203ENST00000444739 FCHSD2O94868 740 aa12.25□□□□□ -0.45
CASP4-203ENST00000444739 BRD1O95696 1058 aa12.25□□□□□ -0.45
CASP4-203ENST00000444739 HMGN5P82970 282 aaKnown RBP12.25□□□□□ -0.45
CASP4-203ENST00000444739 OTUD7AQ8TE49 926 aaPredicted RBP12.25□□□□□ -0.45
CASP4-203ENST00000444739 PIBF1Q8WXW3 757 aa12.25□□□□□ -0.45
CASP4-203ENST00000444739 ATP10DQ9P241 1426 aa12.24□□□□□ -0.45
CASP4-203ENST00000444739 ATAD2Q6PL18 1390 aa12.24□□□□□ -0.45
CASP4-203ENST00000444739 REC8O95072 547 aa12.23□□□□□ -0.45
CASP4-203ENST00000444739 FOXD4L5Q5VV16 416 aaPredicted RBP12.23□□□□□ -0.45
CASP4-203ENST00000444739 CASC1Q6TDU7 716 aa12.23□□□□□ -0.45
CASP4-203ENST00000444739 FOXD4L4Q8WXT5 416 aaPredicted RBP12.23□□□□□ -0.45
CASP4-203ENST00000444739 TSC1Q92574 1164 aa12.23□□□□□ -0.45
CASP4-203ENST00000444739 KIF20BQ96Q89 1820 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms