RNA–Protein interactions for RNA: ENST00000444658.7

CCNDBP1-202, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-202ENST00000444658 STRCP1A6NGW2 1772 aa12.16□□□□□ -0.46
CCNDBP1-202ENST00000444658 E9PSI1 815 aa12.15□□□□□ -0.46
CCNDBP1-202ENST00000444658 DSG3P32926 999 aa12.15□□□□□ -0.46
CCNDBP1-202ENST00000444658 SLFN5Q08AF3 891 aa12.15□□□□□ -0.46
CCNDBP1-202ENST00000444658 CCDC146Q8IYE0 955 aa12.15□□□□□ -0.46
CCNDBP1-202ENST00000444658 RSPH6AQ9H0K4 717 aa12.15□□□□□ -0.46
CCNDBP1-202ENST00000444658 USP54Q70EL1 1684 aa12.15□□□□□ -0.46
CCNDBP1-202ENST00000444658 MAP3K19Q56UN5 1328 aa12.15□□□□□ -0.46
CCNDBP1-202ENST00000444658 SHPRHQ149N8 1683 aa12.15□□□□□ -0.47
CCNDBP1-202ENST00000444658 NEFMP07197 916 aa12.14□□□□□ -0.47
CCNDBP1-202ENST00000444658 IP6K1Q92551 441 aa12.14□□□□□ -0.47
CCNDBP1-202ENST00000444658 USP19O94966 1318 aa12.14□□□□□ -0.47
CCNDBP1-202ENST00000444658 RNF123Q5XPI4 1314 aa12.14□□□□□ -0.47
CCNDBP1-202ENST00000444658 RTL1A6NKG5 1358 aa12.14□□□□□ -0.47
CCNDBP1-202ENST00000444658 KIF1AQ12756 1690 aa12.14□□□□□ -0.47
CCNDBP1-202ENST00000444658 RGPD8O14715 1765 aaPredicted RBP12.14□□□□□ -0.47
CCNDBP1-202ENST00000444658 GCP02774 474 aa12.14□□□□□ -0.47
CCNDBP1-202ENST00000444658 TMPOP42166 694 aaKnown RBP12.14□□□□□ -0.47
CCNDBP1-202ENST00000444658 AMPHP49418 695 aa12.14□□□□□ -0.47
CCNDBP1-202ENST00000444658 EIF4A2Q14240 407 aaKnown RBP12.14□□□□□ -0.47
CCNDBP1-202ENST00000444658 HSP90AB2PQ58FF8 381 aa12.13□□□□□ -0.47
CCNDBP1-202ENST00000444658 DUSP27Q5VZP5 1158 aa12.13□□□□□ -0.47
CCNDBP1-202ENST00000444658 BRINP3Q76B58 766 aa12.13□□□□□ -0.47
CCNDBP1-202ENST00000444658 IL16Q14005 1332 aa12.13□□□□□ -0.47
CCNDBP1-202ENST00000444658 MAPK8IP3Q9UPT6 1336 aa12.13□□□□□ -0.47
CCNDBP1-202ENST00000444658 HOXC9P31274 260 aa12.12□□□□□ -0.47
CCNDBP1-202ENST00000444658 ARHGEF25Q86VW2 580 aa12.12□□□□□ -0.47
CCNDBP1-202ENST00000444658 SALL2Q9Y467 1007 aaPredicted RBP12.12□□□□□ -0.47
CCNDBP1-202ENST00000444658 PIK3C2AO00443 1686 aa12.11□□□□□ -0.47
CCNDBP1-202ENST00000444658 IQSEC2Q5JU85 1478 aa12.11□□□□□ -0.47
CCNDBP1-202ENST00000444658 SOS2Q07890 1332 aaPredicted RBP12.11□□□□□ -0.47
CCNDBP1-202ENST00000444658 SPATA31A3Q5VYP0 1347 aa12.11□□□□□ -0.47
CCNDBP1-202ENST00000444658 CDCA7LQ96GN5 454 aa12.11□□□□□ -0.47
CCNDBP1-202ENST00000444658 ARHGEF10O15013 1369 aa12.1□□□□□ -0.47
CCNDBP1-202ENST00000444658 MAP2P11137 1827 aaKnown RBP12.1□□□□□ -0.47
CCNDBP1-202ENST00000444658 KDRP35968 1356 aa12.1□□□□□ -0.47
CCNDBP1-202ENST00000444658 ABCB7O75027 752 aa12.09□□□□□ -0.47
CCNDBP1-202ENST00000444658 PRKAR2BP31323 418 aa12.09□□□□□ -0.47
CCNDBP1-202ENST00000444658 RIPK4P57078 832 aa12.09□□□□□ -0.47
CCNDBP1-202ENST00000444658 CALD1Q05682 793 aaKnown RBP12.09□□□□□ -0.47
CCNDBP1-202ENST00000444658 NFE2L2Q16236 605 aa12.09□□□□□ -0.47
CCNDBP1-202ENST00000444658 TRIM35Q9UPQ4 493 aa12.09□□□□□ -0.47
CCNDBP1-202ENST00000444658 SLIT3O75094 1523 aa12.09□□□□□ -0.47
CCNDBP1-202ENST00000444658 IGSF1Q8N6C5 1336 aa12.09□□□□□ -0.47
CCNDBP1-202ENST00000444658 CT47B1P0C2W7 299 aaPredicted RBP12.08□□□□□ -0.47
CCNDBP1-202ENST00000444658 LMOD3Q0VAK6 560 aa12.08□□□□□ -0.47
CCNDBP1-202ENST00000444658 FKBP8Q14318 412 aa12.08□□□□□ -0.47
CCNDBP1-202ENST00000444658 NUTM2GQ5VZR2 741 aa12.08□□□□□ -0.47
CCNDBP1-202ENST00000444658 RCAN3Q9UKA8 241 aa12.08□□□□□ -0.47
CCNDBP1-202ENST00000444658 SULT6B1Q6IMI4 303 aa12.08□□□□□ -0.48
CCNDBP1-202ENST00000444658 EYA1Q99502 592 aa12.08□□□□□ -0.48
CCNDBP1-202ENST00000444658 MYH16Q9H6N6 1097 aa12.08□□□□□ -0.48
CCNDBP1-202ENST00000444658 PXDNQ92626 1479 aa12.07□□□□□ -0.48
CCNDBP1-202ENST00000444658 NFAT5O94916 1531 aa12.07□□□□□ -0.48
CCNDBP1-202ENST00000444658 HTATSF1O43719 755 aaKnown RBP12.07□□□□□ -0.48
CCNDBP1-202ENST00000444658 PHACTR3Q96KR7 559 aa12.07□□□□□ -0.48
CCNDBP1-202ENST00000444658 TNS3Q68CZ2 1445 aa12.07□□□□□ -0.48
CCNDBP1-202ENST00000444658 HMOX1P09601 288 aa12.06□□□□□ -0.48
CCNDBP1-202ENST00000444658 XPCQ01831 940 aaPredicted RBP12.06□□□□□ -0.48
CCNDBP1-202ENST00000444658 TRPM3Q9HCF6 1732 aaPredicted RBP12.06□□□□□ -0.48
CCNDBP1-202ENST00000444658 XIRP1Q702N8 1843 aaKnown RBP12.05□□□□□ -0.48
CCNDBP1-202ENST00000444658 SOX12O15370 315 aa12.05□□□□□ -0.48
CCNDBP1-202ENST00000444658 NEUROD2Q15784 382 aa12.05□□□□□ -0.48
CCNDBP1-202ENST00000444658 CPDO75976 1380 aa12.05□□□□□ -0.48
CCNDBP1-202ENST00000444658 LTBP4Q8N2S1 1624 aa12.05□□□□□ -0.48
CCNDBP1-202ENST00000444658 PHRF1Q9P1Y6 1649 aaKnown RBP12.05□□□□□ -0.48
CCNDBP1-202ENST00000444658 SENP3-EIF4A1A0A087X0R7 540 aa12.04□□□□□ -0.48
CCNDBP1-202ENST00000444658 LMOD2Q6P5Q4 547 aa12.04□□□□□ -0.48
CCNDBP1-202ENST00000444658 RRP7AQ9Y3A4 280 aaKnown RBP12.04□□□□□ -0.48
CCNDBP1-202ENST00000444658 PLEKHG2Q9H7P9 1386 aa12.04□□□□□ -0.48
CCNDBP1-202ENST00000444658 GAS2L2Q8NHY3 880 aa12.03□□□□□ -0.48
CCNDBP1-202ENST00000444658 LRRC59Q96AG4 307 aaKnown RBP12.03□□□□□ -0.48
CCNDBP1-202ENST00000444658 PEAK1Q9H792 1746 aa12.03□□□□□ -0.48
CCNDBP1-202ENST00000444658 MARF1Q9Y4F3 1742 aaKnown RBP12.03□□□□□ -0.48
CCNDBP1-202ENST00000444658 POLA2Q14181 598 aa12.02□□□□□ -0.48
CCNDBP1-202ENST00000444658 DDX17Q92841 729 aaKnown RBP12.02□□□□□ -0.48
CCNDBP1-202ENST00000444658 ZNF428Q96B54 188 aa12.02□□□□□ -0.48
CCNDBP1-202ENST00000444658 ALS2Q96Q42 1657 aa12.02□□□□□ -0.49
CCNDBP1-202ENST00000444658 ABCC6O95255 1503 aa12.02□□□□□ -0.49
CCNDBP1-202ENST00000444658 ZNF853P0CG23 659 aa12.02□□□□□ -0.49
CCNDBP1-202ENST00000444658 GNAI1P63096 354 aa12.02□□□□□ -0.49
CCNDBP1-202ENST00000444658 AEBP1Q8IUX7 1158 aa12.02□□□□□ -0.49
CCNDBP1-202ENST00000444658 IFT57Q9NWB7 429 aa12.02□□□□□ -0.49
CCNDBP1-202ENST00000444658 RGPD1P0DJD0 1748 aa12.01□□□□□ -0.49
CCNDBP1-202ENST00000444658 NCAPD2Q15021 1401 aa12.01□□□□□ -0.49
CCNDBP1-202ENST00000444658 RRP1P56182 461 aaKnown RBP12.01□□□□□ -0.49
CCNDBP1-202ENST00000444658 NBPF6Q5VWK0 638 aa12.01□□□□□ -0.49
CCNDBP1-202ENST00000444658 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.01□□□□□ -0.49
CCNDBP1-202ENST00000444658 NBPF4Q96M43 638 aa12.01□□□□□ -0.49
CCNDBP1-202ENST00000444658 CFAP44Q96MT7 982 aa12.01□□□□□ -0.49
CCNDBP1-202ENST00000444658 BABAM1Q9NWV8 329 aa12.01□□□□□ -0.49
CCNDBP1-202ENST00000444658 MED1Q15648 1581 aaPredicted RBP12□□□□□ -0.49
CCNDBP1-202ENST00000444658 TOM1O60784 492 aa12□□□□□ -0.49
CCNDBP1-202ENST00000444658 AMOTQ4VCS5 1084 aa12□□□□□ -0.49
CCNDBP1-202ENST00000444658 AXIN2Q9Y2T1 843 aa12□□□□□ -0.49
CCNDBP1-202ENST00000444658 MTHFSDQ2M296 383 aaKnown RBP11.99□□□□□ -0.49
CCNDBP1-202ENST00000444658 ANKRD24Q8TF21 1146 aa11.99□□□□□ -0.49
CCNDBP1-202ENST00000444658 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.98□□□□□ -0.49
CCNDBP1-202ENST00000444658 ERBB3P21860 1342 aa11.98□□□□□ -0.49
CCNDBP1-202ENST00000444658 CHL1O00533 1208 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 1283.5 ms