RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 EIF4A2Q14240 407 aaKnown RBP12.52□□□□□ -0.4
SMPD4P1-203ENST00000443839 NFAT5O94916 1531 aa12.52□□□□□ -0.41
SMPD4P1-203ENST00000443839 TNS3Q68CZ2 1445 aa12.52□□□□□ -0.41
SMPD4P1-203ENST00000443839 GCP02774 474 aa12.52□□□□□ -0.41
SMPD4P1-203ENST00000443839 NEFMP07197 916 aa12.52□□□□□ -0.41
SMPD4P1-203ENST00000443839 HMOX1P09601 288 aa12.52□□□□□ -0.41
SMPD4P1-203ENST00000443839 NEUROD2Q15784 382 aa12.52□□□□□ -0.41
SMPD4P1-203ENST00000443839 LTN1O94822 1766 aa12.52□□□□□ -0.41
SMPD4P1-203ENST00000443839 USP19O94966 1318 aa12.51□□□□□ -0.41
SMPD4P1-203ENST00000443839 ZBTB7CA1YPR0 619 aa12.51□□□□□ -0.41
SMPD4P1-203ENST00000443839 RRP7AQ9Y3A4 280 aaKnown RBP12.51□□□□□ -0.41
SMPD4P1-203ENST00000443839 IQSEC2Q5JU85 1478 aa12.51□□□□□ -0.41
SMPD4P1-203ENST00000443839 SLIT3O75094 1523 aa12.51□□□□□ -0.41
SMPD4P1-203ENST00000443839 HOXC9P31274 260 aa12.5□□□□□ -0.41
SMPD4P1-203ENST00000443839 PRKAR2BP31323 418 aa12.5□□□□□ -0.41
SMPD4P1-203ENST00000443839 PLEKHF1Q96S99 279 aa12.5□□□□□ -0.41
SMPD4P1-203ENST00000443839 RSPH6AQ9H0K4 717 aa12.5□□□□□ -0.41
SMPD4P1-203ENST00000443839 RTL1A6NKG5 1358 aa12.5□□□□□ -0.41
SMPD4P1-203ENST00000443839 ARHGEF10O15013 1369 aa12.5□□□□□ -0.41
SMPD4P1-203ENST00000443839 SPATA31A3Q5VYP0 1347 aa12.5□□□□□ -0.41
SMPD4P1-203ENST00000443839 CDCA7LQ96GN5 454 aa12.49□□□□□ -0.41
SMPD4P1-203ENST00000443839 SOS2Q07890 1332 aaPredicted RBP12.49□□□□□ -0.41
SMPD4P1-203ENST00000443839 ZNF521Q96K83 1311 aa12.49□□□□□ -0.41
SMPD4P1-203ENST00000443839 GOLGA2Q08379 1002 aa12.49□□□□□ -0.41
SMPD4P1-203ENST00000443839 SULT6B1Q6IMI4 303 aa12.48□□□□□ -0.41
SMPD4P1-203ENST00000443839 WWC1Q8IX03 1113 aa12.47□□□□□ -0.41
SMPD4P1-203ENST00000443839 IP6K1Q92551 441 aa12.47□□□□□ -0.41
SMPD4P1-203ENST00000443839 LTV1Q96GA3 475 aaPredicted RBP12.47□□□□□ -0.41
SMPD4P1-203ENST00000443839 MED1Q15648 1581 aaPredicted RBP12.47□□□□□ -0.41
SMPD4P1-203ENST00000443839 TMPOP42166 694 aaKnown RBP12.47□□□□□ -0.41
SMPD4P1-203ENST00000443839 ARHGEF25Q86VW2 580 aa12.47□□□□□ -0.41
SMPD4P1-203ENST00000443839 AEBP1Q8IUX7 1158 aa12.46□□□□□ -0.41
SMPD4P1-203ENST00000443839 CABLES1Q8TDN4 633 aa12.46□□□□□ -0.41
SMPD4P1-203ENST00000443839 RGPD1P0DJD0 1748 aa12.46□□□□□ -0.41
SMPD4P1-203ENST00000443839 NHSL1Q5SYE7 1610 aa12.46□□□□□ -0.41
SMPD4P1-203ENST00000443839 PHRF1Q9P1Y6 1649 aaKnown RBP12.46□□□□□ -0.41
SMPD4P1-203ENST00000443839 ZC3H6P61129 1189 aaKnown RBP12.46□□□□□ -0.42
SMPD4P1-203ENST00000443839 CCDC27Q2M243 656 aa12.46□□□□□ -0.42
SMPD4P1-203ENST00000443839 SUPT16HQ9Y5B9 1047 aaKnown RBP12.46□□□□□ -0.42
SMPD4P1-203ENST00000443839 ROBO1Q9Y6N7 1651 aa12.45□□□□□ -0.42
SMPD4P1-203ENST00000443839 PHACTR3Q96KR7 559 aa12.45□□□□□ -0.42
SMPD4P1-203ENST00000443839 EYA1Q99502 592 aa12.45□□□□□ -0.42
SMPD4P1-203ENST00000443839 NEFLP07196 543 aa12.44□□□□□ -0.42
SMPD4P1-203ENST00000443839 RIPK4P57078 832 aa12.44□□□□□ -0.42
SMPD4P1-203ENST00000443839 IGSF1Q8N6C5 1336 aa12.44□□□□□ -0.42
SMPD4P1-203ENST00000443839 E9PSI1 815 aa12.44□□□□□ -0.42
SMPD4P1-203ENST00000443839 HAP1P54257 671 aaPredicted RBP12.43□□□□□ -0.42
SMPD4P1-203ENST00000443839 SLFN5Q08AF3 891 aa12.43□□□□□ -0.42
SMPD4P1-203ENST00000443839 TOM1O60784 492 aa12.43□□□□□ -0.42
SMPD4P1-203ENST00000443839 NFE2L2Q16236 605 aa12.43□□□□□ -0.42
SMPD4P1-203ENST00000443839 WDR63Q8IWG1 891 aa12.43□□□□□ -0.42
SMPD4P1-203ENST00000443839 KDRP35968 1356 aa12.42□□□□□ -0.42
SMPD4P1-203ENST00000443839 CRYBG1Q9Y4K1 1723 aa12.42□□□□□ -0.42
SMPD4P1-203ENST00000443839 DUSP27Q5VZP5 1158 aa12.42□□□□□ -0.42
SMPD4P1-203ENST00000443839 SPINK5Q9NQ38 1064 aaPredicted RBP12.41□□□□□ -0.42
SMPD4P1-203ENST00000443839 TRIM35Q9UPQ4 493 aa12.41□□□□□ -0.42
SMPD4P1-203ENST00000443839 ANKRD24Q8TF21 1146 aa12.41□□□□□ -0.42
SMPD4P1-203ENST00000443839 KIAA0232Q92628 1395 aa12.41□□□□□ -0.42
SMPD4P1-203ENST00000443839 LRRC59Q96AG4 307 aaKnown RBP12.4□□□□□ -0.42
SMPD4P1-203ENST00000443839 RCAN3Q9UKA8 241 aa12.4□□□□□ -0.42
SMPD4P1-203ENST00000443839 AXIN2Q9Y2T1 843 aa12.4□□□□□ -0.42
SMPD4P1-203ENST00000443839 AHDC1Q5TGY3 1603 aaPredicted RBP12.4□□□□□ -0.42
SMPD4P1-203ENST00000443839 PIP4K2BP78356 416 aa12.4□□□□□ -0.43
SMPD4P1-203ENST00000443839 LMOD3Q0VAK6 560 aa12.4□□□□□ -0.43
SMPD4P1-203ENST00000443839 NBPF6Q5VWK0 638 aa12.4□□□□□ -0.43
SMPD4P1-203ENST00000443839 USHBP1Q8N6Y0 703 aa12.4□□□□□ -0.43
SMPD4P1-203ENST00000443839 NBPF4Q96M43 638 aa12.4□□□□□ -0.43
SMPD4P1-203ENST00000443839 CPDO75976 1380 aa12.4□□□□□ -0.43
SMPD4P1-203ENST00000443839 CHRNA2Q15822 529 aa12.39□□□□□ -0.43
SMPD4P1-203ENST00000443839 TRMT2AQ8IZ69 625 aaKnown RBP12.39□□□□□ -0.43
SMPD4P1-203ENST00000443839 MYH16Q9H6N6 1097 aa12.39□□□□□ -0.43
SMPD4P1-203ENST00000443839 RGPD5Q99666 1765 aa12.39□□□□□ -0.43
SMPD4P1-203ENST00000443839 ERBB3P21860 1342 aa12.38□□□□□ -0.43
SMPD4P1-203ENST00000443839 UBAP1LF5GYI3 381 aa12.38□□□□□ -0.43
SMPD4P1-203ENST00000443839 PRDM11Q9NQV5 511 aa12.38□□□□□ -0.43
SMPD4P1-203ENST00000443839 ABCC6O95255 1503 aa12.38□□□□□ -0.43
SMPD4P1-203ENST00000443839 DLG5Q8TDM6 1919 aa12.38□□□□□ -0.43
SMPD4P1-203ENST00000443839 FKBP8Q14318 412 aa12.38□□□□□ -0.43
SMPD4P1-203ENST00000443839 RGPD2P0DJD1 1756 aa12.37□□□□□ -0.43
SMPD4P1-203ENST00000443839 ABCA3Q99758 1704 aa12.37□□□□□ -0.43
SMPD4P1-203ENST00000443839 CALD1Q05682 793 aaKnown RBP12.37□□□□□ -0.43
SMPD4P1-203ENST00000443839 IL16Q14005 1332 aa12.37□□□□□ -0.43
SMPD4P1-203ENST00000443839 CSB-PGBD3P0DP91 1061 aa12.37□□□□□ -0.43
SMPD4P1-203ENST00000443839 GAS2L2Q8NHY3 880 aa12.37□□□□□ -0.43
SMPD4P1-203ENST00000443839 COL18A1P39060 1754 aa12.36□□□□□ -0.43
SMPD4P1-203ENST00000443839 PRKCSHP14314 528 aaPredicted RBP12.36□□□□□ -0.43
SMPD4P1-203ENST00000443839 MTHFSDQ2M296 383 aaKnown RBP12.36□□□□□ -0.43
SMPD4P1-203ENST00000443839 PHLPP1O60346 1717 aa12.36□□□□□ -0.43
SMPD4P1-203ENST00000443839 THUMPD2Q9BTF0 503 aaKnown RBP12.35□□□□□ -0.43
SMPD4P1-203ENST00000443839 NLRP2Q9NX02 1062 aa12.35□□□□□ -0.43
SMPD4P1-203ENST00000443839 FAM83GA6ND36 823 aa12.35□□□□□ -0.43
SMPD4P1-203ENST00000443839 IRX6P78412 446 aaPredicted RBP12.35□□□□□ -0.43
SMPD4P1-203ENST00000443839 FANCIQ9NVI1 1328 aa12.34□□□□□ -0.43
SMPD4P1-203ENST00000443839 RTF1Q92541 710 aaKnown RBP12.34□□□□□ -0.43
SMPD4P1-203ENST00000443839 TSR2Q969E8 191 aaKnown RBP12.34□□□□□ -0.43
SMPD4P1-203ENST00000443839 LAS1LQ9Y4W2 734 aaKnown RBP12.34□□□□□ -0.43
SMPD4P1-203ENST00000443839 DCTN1Q14203 1278 aa12.34□□□□□ -0.43
SMPD4P1-203ENST00000443839 COL16A1Q07092 1604 aaPredicted RBP12.33□□□□□ -0.43
SMPD4P1-203ENST00000443839 RNF123Q5XPI4 1314 aa12.33□□□□□ -0.44
SMPD4P1-203ENST00000443839 FAM208AQ9UK61 1670 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms