RNA–Protein interactions for RNA: ENST00000443239.7

DNMT3B-205, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 2 BASIC

Gene DNMT3B, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-205ENST00000443239 HDGFL2Q7Z4V5 671 aaPredicted RBP16.32■□□□□ 0.2
DNMT3B-205ENST00000443239 DDX49Q9Y6V7 483 aaKnown RBP16.32■□□□□ 0.2
DNMT3B-205ENST00000443239 NEXMIFQ5QGS0 1516 aa16.31■□□□□ 0.2
DNMT3B-205ENST00000443239 FCHSD2O94868 740 aa16.31■□□□□ 0.2
DNMT3B-205ENST00000443239 HMOX1P09601 288 aa16.31■□□□□ 0.2
DNMT3B-205ENST00000443239 ANP32BQ92688 251 aaKnown RBP16.31■□□□□ 0.2
DNMT3B-205ENST00000443239 PRAM1Q96QH2 718 aa16.31■□□□□ 0.2
DNMT3B-205ENST00000443239 COL3A1P02461 1466 aaPredicted RBP16.31■□□□□ 0.2
DNMT3B-205ENST00000443239 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.31■□□□□ 0.2
DNMT3B-205ENST00000443239 TSPYL6Q8N831 410 aa16.31■□□□□ 0.2
DNMT3B-205ENST00000443239 VAMP4O75379 141 aa16.29■□□□□ 0.2
DNMT3B-205ENST00000443239 NCLP19338 710 aaKnown RBP16.29■□□□□ 0.2
DNMT3B-205ENST00000443239 NASPP49321 788 aaPredicted RBP16.29■□□□□ 0.2
DNMT3B-205ENST00000443239 SLC52A1Q9NWF4 448 aa16.29■□□□□ 0.2
DNMT3B-205ENST00000443239 CDC45O75419 566 aa16.29■□□□□ 0.2
DNMT3B-205ENST00000443239 SIRT2Q8IXJ6 389 aa16.29■□□□□ 0.2
DNMT3B-205ENST00000443239 MRPL50Q8N5N7 158 aaKnown RBP16.29■□□□□ 0.2
DNMT3B-205ENST00000443239 ZNF428Q96B54 188 aa16.29■□□□□ 0.2
DNMT3B-205ENST00000443239 ATAD2Q6PL18 1390 aa16.28■□□□□ 0.2
DNMT3B-205ENST00000443239 PHACTR3Q96KR7 559 aa16.28■□□□□ 0.2
DNMT3B-205ENST00000443239 CABP1Q9NZU7 370 aa16.28■□□□□ 0.2
DNMT3B-205ENST00000443239 RRP9O43818 475 aaKnown RBP16.27■□□□□ 0.2
DNMT3B-205ENST00000443239 PREX1Q8TCU6 1659 aa16.27■□□□□ 0.19
DNMT3B-205ENST00000443239 BAG4O95429 457 aaKnown RBP16.27■□□□□ 0.19
DNMT3B-205ENST00000443239 MYO5BQ9ULV0 1848 aa16.27■□□□□ 0.19
DNMT3B-205ENST00000443239 ARHGEF28Q8N1W1 1705 aaKnown RBP16.27■□□□□ 0.19
DNMT3B-205ENST00000443239 CCDC173Q0VFZ6 552 aa16.26■□□□□ 0.19
DNMT3B-205ENST00000443239 ARHGAP45Q92619 1136 aa16.26■□□□□ 0.19
DNMT3B-205ENST00000443239 BRPF1P55201 1214 aaPredicted RBP16.26■□□□□ 0.19
DNMT3B-205ENST00000443239 CALD1Q05682 793 aaKnown RBP16.26■□□□□ 0.19
DNMT3B-205ENST00000443239 MCTP1Q6DN14 999 aa16.26■□□□□ 0.19
DNMT3B-205ENST00000443239 MLECQ14165 292 aa16.25■□□□□ 0.19
DNMT3B-205ENST00000443239 NFE2L2Q16236 605 aa16.25■□□□□ 0.19
DNMT3B-205ENST00000443239 GNAI1P63096 354 aa16.25■□□□□ 0.19
DNMT3B-205ENST00000443239 KLHL40Q2TBA0 621 aa16.25■□□□□ 0.19
DNMT3B-205ENST00000443239 CDK19Q9BWU1 502 aa16.25■□□□□ 0.19
DNMT3B-205ENST00000443239 MED14O60244 1454 aa16.25■□□□□ 0.19
DNMT3B-205ENST00000443239 GSPT1P15170 499 aaKnown RBP16.24■□□□□ 0.19
DNMT3B-205ENST00000443239 TWISTNBQ3B726 338 aaPredicted RBP16.24■□□□□ 0.19
DNMT3B-205ENST00000443239 VSIG10Q8N0Z9 540 aa16.24■□□□□ 0.19
DNMT3B-205ENST00000443239 MBIPQ9NS73 344 aa16.24■□□□□ 0.19
DNMT3B-205ENST00000443239 POLKQ9UBT6 870 aa16.24■□□□□ 0.19
DNMT3B-205ENST00000443239 TMEM131LA2VDJ0 1609 aa16.24■□□□□ 0.19
DNMT3B-205ENST00000443239 PNPLA6Q8IY17 1366 aa16.24■□□□□ 0.19
DNMT3B-205ENST00000443239 CAVIN1Q6NZI2 390 aaKnown RBP16.23■□□□□ 0.19
DNMT3B-205ENST00000443239 APBB1O00213 710 aa16.22■□□□□ 0.19
DNMT3B-205ENST00000443239 RABEP1Q15276 862 aa16.22■□□□□ 0.19
DNMT3B-205ENST00000443239 MSNP26038 577 aaKnown RBP16.22■□□□□ 0.19
DNMT3B-205ENST00000443239 PLEKHM2Q8IWE5 1019 aa16.22■□□□□ 0.19
DNMT3B-205ENST00000443239 C16orf71Q8IYS4 520 aaPredicted RBP16.22■□□□□ 0.19
DNMT3B-205ENST00000443239 IFT57Q9NWB7 429 aa16.22■□□□□ 0.19
DNMT3B-205ENST00000443239 LRRC7Q96NW7 1537 aa16.22■□□□□ 0.19
DNMT3B-205ENST00000443239 ABCC4O15439 1325 aa16.22■□□□□ 0.19
DNMT3B-205ENST00000443239 C8orf58Q8NAV2 365 aa16.22■□□□□ 0.19
DNMT3B-205ENST00000443239 API5Q9BZZ5 524 aaKnown RBP16.22■□□□□ 0.19
DNMT3B-205ENST00000443239 ZSCAN30Q86W11 494 aa16.21■□□□□ 0.19
DNMT3B-205ENST00000443239 ZFYVE9O95405 1425 aa16.21■□□□□ 0.19
DNMT3B-205ENST00000443239 CD163L1Q9NR16 1453 aa16.21■□□□□ 0.19
DNMT3B-205ENST00000443239 NUCB2P80303 420 aa16.21■□□□□ 0.18
DNMT3B-205ENST00000443239 PTCH1Q13635 1447 aa16.21■□□□□ 0.18
DNMT3B-205ENST00000443239 FAM135BQ49AJ0 1406 aa16.21■□□□□ 0.18
DNMT3B-205ENST00000443239 PPP1R9BQ96SB3 815 aa16.21■□□□□ 0.18
DNMT3B-205ENST00000443239 CLEC17AQ6ZS10 378 aa16.2■□□□□ 0.18
DNMT3B-205ENST00000443239 KIAA1211Q6ZU35 1233 aa16.2■□□□□ 0.18
DNMT3B-205ENST00000443239 EMILIN1Q9Y6C2 1016 aa16.2■□□□□ 0.18
DNMT3B-205ENST00000443239 PIK3R4Q99570 1358 aa16.19■□□□□ 0.18
DNMT3B-205ENST00000443239 TPM2P07951 284 aa16.19■□□□□ 0.18
DNMT3B-205ENST00000443239 PKP1Q13835 747 aa16.19■□□□□ 0.18
DNMT3B-205ENST00000443239 TTC22Q5TAA0 569 aa16.19■□□□□ 0.18
DNMT3B-205ENST00000443239 STAG3Q9UJ98 1225 aa16.19■□□□□ 0.18
DNMT3B-205ENST00000443239 FAM83GA6ND36 823 aa16.19■□□□□ 0.18
DNMT3B-205ENST00000443239 INTS3Q68E01 1043 aaKnown RBP16.19■□□□□ 0.18
DNMT3B-205ENST00000443239 ZSCAN23Q3MJ62 389 aa16.18■□□□□ 0.18
DNMT3B-205ENST00000443239 CFAP44Q96MT7 982 aa16.18■□□□□ 0.18
DNMT3B-205ENST00000443239 CLTCQ00610 1675 aaKnown RBP16.18■□□□□ 0.18
DNMT3B-205ENST00000443239 AGLP35573 1532 aa16.18■□□□□ 0.18
DNMT3B-205ENST00000443239 DCTN1Q14203 1278 aa16.18■□□□□ 0.18
DNMT3B-205ENST00000443239 CASC1Q6TDU7 716 aa16.18■□□□□ 0.18
DNMT3B-205ENST00000443239 USP26Q9BXU7 913 aa16.18■□□□□ 0.18
DNMT3B-205ENST00000443239 DCTPP1Q9H773 170 aa16.18■□□□□ 0.18
DNMT3B-205ENST00000443239 REREQ9P2R6 1566 aa16.17■□□□□ 0.18
DNMT3B-205ENST00000443239 OTUD7AQ8TE49 926 aaPredicted RBP16.17■□□□□ 0.18
DNMT3B-205ENST00000443239 PTPRMP28827 1452 aa16.17■□□□□ 0.18
DNMT3B-205ENST00000443239 PRPF40AO75400 957 aaKnown RBP16.17■□□□□ 0.18
DNMT3B-205ENST00000443239 YTHDC2Q9H6S0 1430 aaKnown RBP16.17■□□□□ 0.18
DNMT3B-205ENST00000443239 KIF13AQ9H1H9 1805 aa16.16■□□□□ 0.18
DNMT3B-205ENST00000443239 IBTKQ9P2D0 1353 aaPredicted RBP16.16■□□□□ 0.18
DNMT3B-205ENST00000443239 ST18O60284 1047 aa16.16■□□□□ 0.18
DNMT3B-205ENST00000443239 ZNF853P0CG23 659 aa16.16■□□□□ 0.18
DNMT3B-205ENST00000443239 LMBRD1Q9NUN5 540 aa16.16■□□□□ 0.18
DNMT3B-205ENST00000443239 SMARCA5O60264 1052 aaPredicted RBP16.15■□□□□ 0.18
DNMT3B-205ENST00000443239 ZNF445P59923 1031 aa16.15■□□□□ 0.18
DNMT3B-205ENST00000443239 LMOD3Q0VAK6 560 aa16.15■□□□□ 0.18
DNMT3B-205ENST00000443239 ZGPATQ8N5A5 531 aaKnown RBP16.15■□□□□ 0.18
DNMT3B-205ENST00000443239 SDSP20132 328 aa16.15■□□□□ 0.18
DNMT3B-205ENST00000443239 IL13P35225 146 aa16.14■□□□□ 0.17
DNMT3B-205ENST00000443239 FOXD4L5Q5VV16 416 aaPredicted RBP16.14■□□□□ 0.17
DNMT3B-205ENST00000443239 WAPLQ7Z5K2 1190 aa16.14■□□□□ 0.17
DNMT3B-205ENST00000443239 FOXD4L4Q8WXT5 416 aaPredicted RBP16.14■□□□□ 0.17
DNMT3B-205ENST00000443239 PPP6R1Q9UPN7 881 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms