RNA–Protein interactions for RNA: ENST00000442742.6

CASK-208, Transcript of calcium/calmodulin dependent serine protein kinase, humanhuman

TSL 1 (best) BASIC

Gene CASK, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASK-208ENST00000442742 PTCH1Q13635 1447 aa12.18□□□□□ -0.46
CASK-208ENST00000442742 SMC4Q9NTJ3 1288 aa12.18□□□□□ -0.46
CASK-208ENST00000442742 AKAP12Q02952 1782 aa12.18□□□□□ -0.46
CASK-208ENST00000442742 ADAMTSL3P82987 1691 aa12.17□□□□□ -0.46
CASK-208ENST00000442742 NFE2L2Q16236 605 aa12.17□□□□□ -0.46
CASK-208ENST00000442742 MCM10Q7L590 875 aa12.16□□□□□ -0.46
CASK-208ENST00000442742 AATKQ6ZMQ8 1374 aa12.16□□□□□ -0.46
CASK-208ENST00000442742 SSH1Q8WYL5 1049 aa12.15□□□□□ -0.46
CASK-208ENST00000442742 NPHP4O75161 1426 aaPredicted RBP12.15□□□□□ -0.46
CASK-208ENST00000442742 DDX17Q92841 729 aaKnown RBP12.15□□□□□ -0.46
CASK-208ENST00000442742 ADGRB2O60241 1585 aa12.15□□□□□ -0.46
CASK-208ENST00000442742 RGS3P49796 1198 aa12.15□□□□□ -0.47
CASK-208ENST00000442742 USHBP1Q8N6Y0 703 aa12.15□□□□□ -0.47
CASK-208ENST00000442742 TSPYL6Q8N831 410 aa12.15□□□□□ -0.47
CASK-208ENST00000442742 MIS18AQ9NYP9 233 aa12.14□□□□□ -0.47
CASK-208ENST00000442742 FTSJ3Q8IY81 847 aaKnown RBP12.14□□□□□ -0.47
CASK-208ENST00000442742 OVOS2A0A0J9YW53 1432 aa12.13□□□□□ -0.47
CASK-208ENST00000442742 OVOS2Q6IE36 1432 aa12.13□□□□□ -0.47
CASK-208ENST00000442742 CDK12Q9NYV4 1490 aaPredicted RBP12.13□□□□□ -0.47
CASK-208ENST00000442742 XRN1Q8IZH2 1706 aaKnown RBP12.13□□□□□ -0.47
CASK-208ENST00000442742 TTC21AQ8NDW8 1320 aa12.13□□□□□ -0.47
CASK-208ENST00000442742 KRT24Q2M2I5 525 aa12.13□□□□□ -0.47
CASK-208ENST00000442742 TOPAZ1Q8N9V7 1692 aa12.12□□□□□ -0.47
CASK-208ENST00000442742 IGHDP01880 384 aa12.12□□□□□ -0.47
CASK-208ENST00000442742 NPM2Q86SE8 214 aaKnown RBP12.12□□□□□ -0.47
CASK-208ENST00000442742 NOB1Q9ULX3 412 aaKnown RBP12.12□□□□□ -0.47
CASK-208ENST00000442742 PIK3R4Q99570 1358 aa12.12□□□□□ -0.47
CASK-208ENST00000442742 EYA1Q99502 592 aa12.12□□□□□ -0.47
CASK-208ENST00000442742 MBIPQ9NS73 344 aa12.12□□□□□ -0.47
CASK-208ENST00000442742 CHD2O14647 1828 aaKnown RBP12.12□□□□□ -0.47
CASK-208ENST00000442742 SSH2Q76I76 1423 aa12.11□□□□□ -0.47
CASK-208ENST00000442742 PDE3AQ14432 1141 aa12.11□□□□□ -0.47
CASK-208ENST00000442742 ZKSCAN2Q63HK3 967 aa12.1□□□□□ -0.47
CASK-208ENST00000442742 NALCNQ8IZF0 1738 aa12.1□□□□□ -0.47
CASK-208ENST00000442742 TRIM27P14373 513 aa12.1□□□□□ -0.47
CASK-208ENST00000442742 ITPRIPQ8IWB1 547 aa12.1□□□□□ -0.47
CASK-208ENST00000442742 BCL11AQ9H165 835 aa12.1□□□□□ -0.47
CASK-208ENST00000442742 C8orf58Q8NAV2 365 aa12.1□□□□□ -0.47
CASK-208ENST00000442742 NRKQ7Z2Y5 1582 aa12.09□□□□□ -0.47
CASK-208ENST00000442742 PEAK1Q9H792 1746 aa12.09□□□□□ -0.47
CASK-208ENST00000442742 HOXC9P31274 260 aa12.09□□□□□ -0.47
CASK-208ENST00000442742 MTHFSDQ2M296 383 aaKnown RBP12.09□□□□□ -0.47
CASK-208ENST00000442742 DZIP1LQ8IYY4 767 aaKnown RBP12.09□□□□□ -0.47
CASK-208ENST00000442742 GNAI1P63096 354 aa12.09□□□□□ -0.47
CASK-208ENST00000442742 PCDHB15Q9Y5E8 787 aa12.09□□□□□ -0.47
CASK-208ENST00000442742 FLT4P35916 1363 aa12.08□□□□□ -0.48
CASK-208ENST00000442742 USP31Q70CQ4 1352 aa12.08□□□□□ -0.48
CASK-208ENST00000442742 DLG5Q8TDM6 1919 aa12.08□□□□□ -0.48
CASK-208ENST00000442742 PIK3C2AO00443 1686 aa12.08□□□□□ -0.48
CASK-208ENST00000442742 IL16Q14005 1332 aa12.07□□□□□ -0.48
CASK-208ENST00000442742 KDM2BQ8NHM5 1336 aa12.07□□□□□ -0.48
CASK-208ENST00000442742 TWISTNBQ3B726 338 aaPredicted RBP12.07□□□□□ -0.48
CASK-208ENST00000442742 CENPQQ7L2Z9 268 aaPredicted RBP12.07□□□□□ -0.48
CASK-208ENST00000442742 ZNF142P52746 1687 aaPredicted RBP12.07□□□□□ -0.48
CASK-208ENST00000442742 LRRC59Q96AG4 307 aaKnown RBP12.07□□□□□ -0.48
CASK-208ENST00000442742 ANKARQ7Z5J8 1434 aa12.07□□□□□ -0.48
CASK-208ENST00000442742 ADGRL3Q9HAR2 1447 aa12.07□□□□□ -0.48
CASK-208ENST00000442742 FMN2Q9NZ56 1722 aa12.07□□□□□ -0.48
CASK-208ENST00000442742 SBNO1A3KN83 1393 aa12.07□□□□□ -0.48
CASK-208ENST00000442742 VAMP4O75379 141 aa12.06□□□□□ -0.48
CASK-208ENST00000442742 ATF3P18847 181 aa12.06□□□□□ -0.48
CASK-208ENST00000442742 ZC3H6P61129 1189 aaKnown RBP12.06□□□□□ -0.48
CASK-208ENST00000442742 ATF7IPQ6VMQ6 1270 aa12.06□□□□□ -0.48
CASK-208ENST00000442742 RTF1Q92541 710 aaKnown RBP12.06□□□□□ -0.48
CASK-208ENST00000442742 CFAP44Q96MT7 982 aa12.06□□□□□ -0.48
CASK-208ENST00000442742 PDE4AP27815 886 aa12.06□□□□□ -0.48
CASK-208ENST00000442742 TMEM57Q8N5G2 664 aa12.06□□□□□ -0.48
CASK-208ENST00000442742 C19orf44Q9H6X5 657 aa12.06□□□□□ -0.48
CASK-208ENST00000442742 LMOD3Q0VAK6 560 aa12.06□□□□□ -0.48
CASK-208ENST00000442742 KRT28Q7Z3Y7 464 aa12.06□□□□□ -0.48
CASK-208ENST00000442742 CABLES1Q8TDN4 633 aa12.06□□□□□ -0.48
CASK-208ENST00000442742 IFT57Q9NWB7 429 aa12.06□□□□□ -0.48
CASK-208ENST00000442742 CALD1Q05682 793 aaKnown RBP12.05□□□□□ -0.48
CASK-208ENST00000442742 MVPQ14764 893 aaKnown RBP12.05□□□□□ -0.48
CASK-208ENST00000442742 NCBP3Q53F19 620 aaKnown RBP12.05□□□□□ -0.48
CASK-208ENST00000442742 NECTIN2Q92692 538 aa12.05□□□□□ -0.48
CASK-208ENST00000442742 TMEM94Q12767 1356 aa12.04□□□□□ -0.48
CASK-208ENST00000442742 MSH5O43196 834 aa12.04□□□□□ -0.48
CASK-208ENST00000442742 GCP02774 474 aa12.04□□□□□ -0.48
CASK-208ENST00000442742 NBPF6Q5VWK0 638 aa12.04□□□□□ -0.48
CASK-208ENST00000442742 NBPF4Q96M43 638 aa12.04□□□□□ -0.48
CASK-208ENST00000442742 ZNF853P0CG23 659 aa12.03□□□□□ -0.48
CASK-208ENST00000442742 KDM4FA0A1W2PPD8 638 aa12.03□□□□□ -0.48
CASK-208ENST00000442742 CT47B1P0C2W7 299 aaPredicted RBP12.03□□□□□ -0.48
CASK-208ENST00000442742 C1orf115Q9H7X2 142 aa12.03□□□□□ -0.48
CASK-208ENST00000442742 IGSF1Q8N6C5 1336 aa12.02□□□□□ -0.49
CASK-208ENST00000442742 IPO8O15397 1037 aaKnown RBP12.01□□□□□ -0.49
CASK-208ENST00000442742 TSPYL4Q9UJ04 414 aa12.01□□□□□ -0.49
CASK-208ENST00000442742 AXIN2Q9Y2T1 843 aa12.01□□□□□ -0.49
CASK-208ENST00000442742 KIF16BQ96L93 1317 aa12□□□□□ -0.49
CASK-208ENST00000442742 MRPL50Q8N5N7 158 aaKnown RBP12□□□□□ -0.49
CASK-208ENST00000442742 IP6K1Q92551 441 aa12□□□□□ -0.49
CASK-208ENST00000442742 BACH2Q9BYV9 841 aa12□□□□□ -0.49
CASK-208ENST00000442742 ALDH1L2Q3SY69 923 aa12□□□□□ -0.49
CASK-208ENST00000442742 CHL1O00533 1208 aa11.99□□□□□ -0.49
CASK-208ENST00000442742 DDX19BQ9UMR2 479 aa11.99□□□□□ -0.49
CASK-208ENST00000442742 ARHGEF10O15013 1369 aa11.99□□□□□ -0.49
CASK-208ENST00000442742 GNAT3A8MTJ3 354 aa11.99□□□□□ -0.49
CASK-208ENST00000442742 CHRNA2Q15822 529 aa11.99□□□□□ -0.49
CASK-208ENST00000442742 KCNH5Q8NCM2 988 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms