RNA–Protein interactions for RNA: ENST00000442241.8

NLE1-202, Transcript of notchless homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLE1, Length 2,588 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-202ENST00000442241 EDC4Q6P2E9 1401 aaKnown RBP20.39■□□□□ 0.86
NLE1-202ENST00000442241 REREQ9P2R6 1566 aa20.39■□□□□ 0.85
NLE1-202ENST00000442241 FRAT2O75474 233 aaPredicted RBP20.39■□□□□ 0.85
NLE1-202ENST00000442241 KRT24Q2M2I5 525 aa20.38■□□□□ 0.85
NLE1-202ENST00000442241 VAMP4O75379 141 aa20.38■□□□□ 0.85
NLE1-202ENST00000442241 C8orf58Q8NAV2 365 aa20.38■□□□□ 0.85
NLE1-202ENST00000442241 ZBTB40Q9NUA8 1239 aa20.38■□□□□ 0.85
NLE1-202ENST00000442241 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.38■□□□□ 0.85
NLE1-202ENST00000442241 VIRMAQ69YN4 1812 aaKnown RBP20.37■□□□□ 0.85
NLE1-202ENST00000442241 LNPKQ9C0E8 428 aa20.37■□□□□ 0.85
NLE1-202ENST00000442241 KIF13AQ9H1H9 1805 aa20.37■□□□□ 0.85
NLE1-202ENST00000442241 MFAP1P55081 439 aaKnown RBP20.37■□□□□ 0.85
NLE1-202ENST00000442241 AAMPQ13685 434 aa20.35■□□□□ 0.85
NLE1-202ENST00000442241 SULT6B1Q6IMI4 303 aa20.35■□□□□ 0.85
NLE1-202ENST00000442241 ACEP12821 1306 aa20.35■□□□□ 0.85
NLE1-202ENST00000442241 KIF16BQ96L93 1317 aa20.35■□□□□ 0.85
NLE1-202ENST00000442241 IPO8O15397 1037 aaKnown RBP20.35■□□□□ 0.85
NLE1-202ENST00000442241 TMEM2Q9UHN6 1383 aa20.34■□□□□ 0.85
NLE1-202ENST00000442241 HSP90AB2PQ58FF8 381 aa20.34■□□□□ 0.85
NLE1-202ENST00000442241 MRPL50Q8N5N7 158 aaKnown RBP20.34■□□□□ 0.85
NLE1-202ENST00000442241 EIF4A2Q14240 407 aaKnown RBP20.33■□□□□ 0.84
NLE1-202ENST00000442241 TWISTNBQ3B726 338 aaPredicted RBP20.33■□□□□ 0.84
NLE1-202ENST00000442241 MCM10Q7L590 875 aa20.33■□□□□ 0.84
NLE1-202ENST00000442241 HDAC1Q13547 482 aaPredicted RBP20.32■□□□□ 0.84
NLE1-202ENST00000442241 HDGFP51858 240 aaKnown RBP20.32■□□□□ 0.84
NLE1-202ENST00000442241 GNAI1P63096 354 aa20.31■□□□□ 0.84
NLE1-202ENST00000442241 ALDH1L2Q3SY69 923 aa20.31■□□□□ 0.84
NLE1-202ENST00000442241 UPF2Q9HAU5 1272 aaKnown RBP20.31■□□□□ 0.84
NLE1-202ENST00000442241 CDC42BPGQ6DT37 1551 aa20.31■□□□□ 0.84
NLE1-202ENST00000442241 TTC21BQ7Z4L5 1316 aa20.31■□□□□ 0.84
NLE1-202ENST00000442241 MIS18AQ9NYP9 233 aa20.31■□□□□ 0.84
NLE1-202ENST00000442241 TBC1D32Q96NH3 1257 aa20.3■□□□□ 0.84
NLE1-202ENST00000442241 ADAMTS13Q76LX8 1427 aa20.3■□□□□ 0.84
NLE1-202ENST00000442241 DLG5Q8TDM6 1919 aa20.29■□□□□ 0.84
NLE1-202ENST00000442241 NUTM2GQ5VZR2 741 aa20.29■□□□□ 0.84
NLE1-202ENST00000442241 IFT57Q9NWB7 429 aa20.29■□□□□ 0.84
NLE1-202ENST00000442241 CDK12Q9NYV4 1490 aaPredicted RBP20.29■□□□□ 0.84
NLE1-202ENST00000442241 ZBTB7BO15156 539 aaPredicted RBP20.28■□□□□ 0.84
NLE1-202ENST00000442241 SMC5Q8IY18 1101 aa20.28■□□□□ 0.84
NLE1-202ENST00000442241 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.28■□□□□ 0.84
NLE1-202ENST00000442241 ZNF853P0CG23 659 aa20.28■□□□□ 0.84
NLE1-202ENST00000442241 ANKRD45Q5TZF3 282 aa20.28■□□□□ 0.84
NLE1-202ENST00000442241 FOXO3O43524 673 aa20.27■□□□□ 0.84
NLE1-202ENST00000442241 UBE2Q2Q8WVN8 375 aa20.27■□□□□ 0.84
NLE1-202ENST00000442241 UBR1Q8IWV7 1749 aa20.27■□□□□ 0.84
NLE1-202ENST00000442241 CFAP44Q96MT7 982 aa20.27■□□□□ 0.83
NLE1-202ENST00000442241 ZNF692Q9BU19 519 aaPredicted RBP20.27■□□□□ 0.83
NLE1-202ENST00000442241 TBC1D2Q9BYX2 928 aa20.27■□□□□ 0.83
NLE1-202ENST00000442241 AMOTL2Q9Y2J4 779 aa20.26■□□□□ 0.83
NLE1-202ENST00000442241 AATKQ6ZMQ8 1374 aa20.26■□□□□ 0.83
NLE1-202ENST00000442241 PTPRUQ92729 1446 aa20.26■□□□□ 0.83
NLE1-202ENST00000442241 MON2Q7Z3U7 1717 aa20.25■□□□□ 0.83
NLE1-202ENST00000442241 ITSN1Q15811 1721 aa20.25■□□□□ 0.83
NLE1-202ENST00000442241 BECN1Q14457 450 aa20.25■□□□□ 0.83
NLE1-202ENST00000442241 SIRT2Q8IXJ6 389 aa20.25■□□□□ 0.83
NLE1-202ENST00000442241 RBM33Q96EV2 1170 aaKnown RBP20.25■□□□□ 0.83
NLE1-202ENST00000442241 NUCB1Q02818 461 aa20.24■□□□□ 0.83
NLE1-202ENST00000442241 C22orf23Q9BZE7 217 aa20.24■□□□□ 0.83
NLE1-202ENST00000442241 CALD1Q05682 793 aaKnown RBP20.24■□□□□ 0.83
NLE1-202ENST00000442241 CHD1LQ86WJ1 897 aa20.24■□□□□ 0.83
NLE1-202ENST00000442241 C3P01024 1663 aa20.24■□□□□ 0.83
NLE1-202ENST00000442241 TECPR2O15040 1411 aa20.23■□□□□ 0.83
NLE1-202ENST00000442241 AKAP12Q02952 1782 aa20.22■□□□□ 0.83
NLE1-202ENST00000442241 PLEKHG5O94827 1062 aa20.22■□□□□ 0.83
NLE1-202ENST00000442241 NGDNQ8NEJ9 315 aaKnown RBP20.21■□□□□ 0.83
NLE1-202ENST00000442241 APBB1O00213 710 aa20.21■□□□□ 0.83
NLE1-202ENST00000442241 SIRT1Q96EB6 747 aa20.21■□□□□ 0.83
NLE1-202ENST00000442241 EID1Q9Y6B2 187 aa20.2■□□□□ 0.82
NLE1-202ENST00000442241 KNDC1Q76NI1 1749 aa20.2■□□□□ 0.82
NLE1-202ENST00000442241 LMOD3Q0VAK6 560 aa20.2■□□□□ 0.82
NLE1-202ENST00000442241 MAP3K19Q56UN5 1328 aa20.19■□□□□ 0.82
NLE1-202ENST00000442241 USP6P35125 1406 aa20.18■□□□□ 0.82
NLE1-202ENST00000442241 ABCC4O15439 1325 aa20.18■□□□□ 0.82
NLE1-202ENST00000442241 PEAK1Q9H792 1746 aa20.17■□□□□ 0.82
NLE1-202ENST00000442241 PLEKHG3A1L390 1219 aa20.17■□□□□ 0.82
NLE1-202ENST00000442241 LTV1Q96GA3 475 aaPredicted RBP20.17■□□□□ 0.82
NLE1-202ENST00000442241 RIMS1Q86UR5 1692 aaKnown RBP20.17■□□□□ 0.82
NLE1-202ENST00000442241 PLEKHG1Q9ULL1 1385 aa20.17■□□□□ 0.82
NLE1-202ENST00000442241 BRPF1P55201 1214 aaPredicted RBP20.16■□□□□ 0.82
NLE1-202ENST00000442241 PTCH1Q13635 1447 aa20.16■□□□□ 0.82
NLE1-202ENST00000442241 FAM43AQ8N2R8 423 aa20.16■□□□□ 0.82
NLE1-202ENST00000442241 NECTIN2Q92692 538 aa20.16■□□□□ 0.82
NLE1-202ENST00000442241 ZNF428Q96B54 188 aa20.16■□□□□ 0.82
NLE1-202ENST00000442241 OVOS2A0A0J9YW53 1432 aa20.15■□□□□ 0.82
NLE1-202ENST00000442241 OVOS2Q6IE36 1432 aa20.15■□□□□ 0.82
NLE1-202ENST00000442241 MTHFSDQ2M296 383 aaKnown RBP20.15■□□□□ 0.82
NLE1-202ENST00000442241 C14orf37Q86TY3 774 aa20.15■□□□□ 0.82
NLE1-202ENST00000442241 C16orf71Q8IYS4 520 aaPredicted RBP20.15■□□□□ 0.82
NLE1-202ENST00000442241 ANTXR1Q9H6X2 564 aa20.15■□□□□ 0.82
NLE1-202ENST00000442241 RGPD8O14715 1765 aaPredicted RBP20.15■□□□□ 0.82
NLE1-202ENST00000442241 AMPHP49418 695 aa20.15■□□□□ 0.82
NLE1-202ENST00000442241 ARHGAP45Q92619 1136 aa20.15■□□□□ 0.82
NLE1-202ENST00000442241 ARXQ96QS3 562 aa20.13■□□□□ 0.81
NLE1-202ENST00000442241 API5Q9BZZ5 524 aaKnown RBP20.13■□□□□ 0.81
NLE1-202ENST00000442241 F6X3S4 739 aa20.12■□□□□ 0.81
NLE1-202ENST00000442241 CHL1O00533 1208 aa20.12■□□□□ 0.81
NLE1-202ENST00000442241 NLRP6P59044 892 aa20.12■□□□□ 0.81
NLE1-202ENST00000442241 SLC4A10Q6U841 1118 aa20.12■□□□□ 0.81
NLE1-202ENST00000442241 G2E3Q7L622 706 aa20.12■□□□□ 0.81
NLE1-202ENST00000442241 SMARCA5O60264 1052 aaPredicted RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms