RNA–Protein interactions for RNA: ENST00000441366.6

EPB42-202, Transcript of erythrocyte membrane protein band 4.2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPB42, Length 2,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-202ENST00000441366 AEBP1Q8IUX7 1158 aa17.23■□□□□ 0.35
EPB42-202ENST00000441366 FRAT1Q92837 279 aaPredicted RBP17.23■□□□□ 0.35
EPB42-202ENST00000441366 THUMPD2Q9BTF0 503 aaKnown RBP17.23■□□□□ 0.35
EPB42-202ENST00000441366 MYH16Q9H6N6 1097 aa17.23■□□□□ 0.35
EPB42-202ENST00000441366 MAP3K19Q56UN5 1328 aa17.23■□□□□ 0.35
EPB42-202ENST00000441366 PROSER2Q86WR7 435 aaPredicted RBP17.23■□□□□ 0.35
EPB42-202ENST00000441366 LAS1LQ9Y4W2 734 aaKnown RBP17.22■□□□□ 0.35
EPB42-202ENST00000441366 SULT6B1Q6IMI4 303 aa17.22■□□□□ 0.35
EPB42-202ENST00000441366 CANXP27824 592 aaKnown RBP17.21■□□□□ 0.35
EPB42-202ENST00000441366 XPCQ01831 940 aaPredicted RBP17.21■□□□□ 0.35
EPB42-202ENST00000441366 ORAI2Q96SN7 254 aa17.21■□□□□ 0.35
EPB42-202ENST00000441366 RARSP54136 660 aaKnown RBP17.21■□□□□ 0.34
EPB42-202ENST00000441366 EXOSC9Q06265 439 aaKnown RBP17.21■□□□□ 0.34
EPB42-202ENST00000441366 PEAK1Q9H792 1746 aa17.21■□□□□ 0.34
EPB42-202ENST00000441366 USP31Q70CQ4 1352 aa17.2■□□□□ 0.34
EPB42-202ENST00000441366 ANO8Q9HCE9 1232 aaPredicted RBP17.2■□□□□ 0.34
EPB42-202ENST00000441366 PIK3C2AO00443 1686 aa17.2■□□□□ 0.34
EPB42-202ENST00000441366 ADGRL3Q9HAR2 1447 aa17.2■□□□□ 0.34
EPB42-202ENST00000441366 AMPHP49418 695 aa17.2■□□□□ 0.34
EPB42-202ENST00000441366 PSME1Q06323 249 aa17.2■□□□□ 0.34
EPB42-202ENST00000441366 NFE2L2Q16236 605 aa17.2■□□□□ 0.34
EPB42-202ENST00000441366 NCBP3Q53F19 620 aaKnown RBP17.19■□□□□ 0.34
EPB42-202ENST00000441366 FAM83GA6ND36 823 aa17.18■□□□□ 0.34
EPB42-202ENST00000441366 FOXO3O43524 673 aa17.18■□□□□ 0.34
EPB42-202ENST00000441366 TNNQ9UQP3 1299 aa17.18■□□□□ 0.34
EPB42-202ENST00000441366 DCTN1Q14203 1278 aa17.17■□□□□ 0.34
EPB42-202ENST00000441366 PANK1Q8TE04 598 aa17.17■□□□□ 0.34
EPB42-202ENST00000441366 ZBTB7CA1YPR0 619 aa17.15■□□□□ 0.34
EPB42-202ENST00000441366 LTV1Q96GA3 475 aaPredicted RBP17.15■□□□□ 0.34
EPB42-202ENST00000441366 LMOD2Q6P5Q4 547 aa17.15■□□□□ 0.34
EPB42-202ENST00000441366 SKAP1Q86WV1 359 aa17.15■□□□□ 0.34
EPB42-202ENST00000441366 CLUAP1Q96AJ1 413 aa17.15■□□□□ 0.34
EPB42-202ENST00000441366 COG6Q9Y2V7 657 aa17.15■□□□□ 0.34
EPB42-202ENST00000441366 DLG5Q8TDM6 1919 aa17.14■□□□□ 0.33
EPB42-202ENST00000441366 IPO9Q96P70 1041 aaKnown RBP17.13■□□□□ 0.33
EPB42-202ENST00000441366 SBNO1A3KN83 1393 aa17.13■□□□□ 0.33
EPB42-202ENST00000441366 KDM4FA0A1W2PPD8 638 aa17.13■□□□□ 0.33
EPB42-202ENST00000441366 IL16Q14005 1332 aa17.12■□□□□ 0.33
EPB42-202ENST00000441366 FLT4P35916 1363 aa17.12■□□□□ 0.33
EPB42-202ENST00000441366 ELL2O00472 640 aaPredicted RBP17.11■□□□□ 0.33
EPB42-202ENST00000441366 EYA1Q99502 592 aa17.11■□□□□ 0.33
EPB42-202ENST00000441366 MARF1Q9Y4F3 1742 aaKnown RBP17.11■□□□□ 0.33
EPB42-202ENST00000441366 RLBP1P12271 317 aa17.11■□□□□ 0.33
EPB42-202ENST00000441366 HOXC9P31274 260 aa17.11■□□□□ 0.33
EPB42-202ENST00000441366 SMC4Q9NTJ3 1288 aa17.11■□□□□ 0.33
EPB42-202ENST00000441366 SSH1Q8WYL5 1049 aa17.1■□□□□ 0.33
EPB42-202ENST00000441366 C19orf44Q9H6X5 657 aa17.1■□□□□ 0.33
EPB42-202ENST00000441366 NWD1Q149M9 1564 aa17.1■□□□□ 0.33
EPB42-202ENST00000441366 ANP32AP39687 249 aaKnown RBP17.09■□□□□ 0.33
EPB42-202ENST00000441366 PDE3AQ14432 1141 aa17.09■□□□□ 0.33
EPB42-202ENST00000441366 MCM10Q7L590 875 aa17.09■□□□□ 0.33
EPB42-202ENST00000441366 DDX17Q92841 729 aaKnown RBP17.09■□□□□ 0.33
EPB42-202ENST00000441366 TMEM94Q12767 1356 aa17.09■□□□□ 0.33
EPB42-202ENST00000441366 RTL5Q5HYW3 569 aaPredicted RBP17.09■□□□□ 0.33
EPB42-202ENST00000441366 STRCP1A6NGW2 1772 aa17.08■□□□□ 0.33
EPB42-202ENST00000441366 MBIPQ9NS73 344 aa17.08■□□□□ 0.33
EPB42-202ENST00000441366 TCERG1O14776 1098 aaKnown RBP17.08■□□□□ 0.32
EPB42-202ENST00000441366 TSPYL6Q8N831 410 aa17.08■□□□□ 0.32
EPB42-202ENST00000441366 USHBP1Q8N6Y0 703 aa17.07■□□□□ 0.32
EPB42-202ENST00000441366 RGPD1P0DJD0 1748 aa17.07■□□□□ 0.32
EPB42-202ENST00000441366 ATF3P18847 181 aa17.07■□□□□ 0.32
EPB42-202ENST00000441366 ZBTB47Q9UFB7 747 aaPredicted RBP17.07■□□□□ 0.32
EPB42-202ENST00000441366 LMOD3Q0VAK6 560 aa17.06■□□□□ 0.32
EPB42-202ENST00000441366 KRT28Q7Z3Y7 464 aa17.06■□□□□ 0.32
EPB42-202ENST00000441366 GNAI1P63096 354 aa17.06■□□□□ 0.32
EPB42-202ENST00000441366 CALD1Q05682 793 aaKnown RBP17.06■□□□□ 0.32
EPB42-202ENST00000441366 MTHFSDQ2M296 383 aaKnown RBP17.06■□□□□ 0.32
EPB42-202ENST00000441366 CT47B1P0C2W7 299 aaPredicted RBP17.05■□□□□ 0.32
EPB42-202ENST00000441366 IFT57Q9NWB7 429 aa17.05■□□□□ 0.32
EPB42-202ENST00000441366 NOB1Q9ULX3 412 aaKnown RBP17.05■□□□□ 0.32
EPB42-202ENST00000441366 ZKSCAN2Q63HK3 967 aa17.04■□□□□ 0.32
EPB42-202ENST00000441366 IL27Q8NEV9 243 aa17.04■□□□□ 0.32
EPB42-202ENST00000441366 ARHGEF10O15013 1369 aa17.04■□□□□ 0.32
EPB42-202ENST00000441366 C1orf167Q5SNV9 1468 aa17.04■□□□□ 0.32
EPB42-202ENST00000441366 ZNF853P0CG23 659 aa17.04■□□□□ 0.32
EPB42-202ENST00000441366 CFAP44Q96MT7 982 aa17.04■□□□□ 0.32
EPB42-202ENST00000441366 IGSF1Q8N6C5 1336 aa17.04■□□□□ 0.32
EPB42-202ENST00000441366 LTN1O94822 1766 aa17.04■□□□□ 0.32
EPB42-202ENST00000441366 FTSJ3Q8IY81 847 aaKnown RBP17.03■□□□□ 0.32
EPB42-202ENST00000441366 C8orf58Q8NAV2 365 aa17.03■□□□□ 0.32
EPB42-202ENST00000441366 KDM2BQ8NHM5 1336 aa17.03■□□□□ 0.32
EPB42-202ENST00000441366 VAMP4O75379 141 aa17.02■□□□□ 0.32
EPB42-202ENST00000441366 GCP02774 474 aa17.02■□□□□ 0.32
EPB42-202ENST00000441366 TRIM27P14373 513 aa17.02■□□□□ 0.32
EPB42-202ENST00000441366 MIS18AQ9NYP9 233 aa17.02■□□□□ 0.32
EPB42-202ENST00000441366 IGHDP01880 384 aa17.02■□□□□ 0.31
EPB42-202ENST00000441366 KRT24Q2M2I5 525 aa17.02■□□□□ 0.31
EPB42-202ENST00000441366 DZIP1LQ8IYY4 767 aaKnown RBP17.02■□□□□ 0.31
EPB42-202ENST00000441366 KCNH5Q8NCM2 988 aa17.01■□□□□ 0.31
EPB42-202ENST00000441366 IP6K1Q92551 441 aa17.01■□□□□ 0.31
EPB42-202ENST00000441366 TWISTNBQ3B726 338 aaPredicted RBP17■□□□□ 0.31
EPB42-202ENST00000441366 CENPQQ7L2Z9 268 aaPredicted RBP17■□□□□ 0.31
EPB42-202ENST00000441366 KDRP35968 1356 aa17■□□□□ 0.31
EPB42-202ENST00000441366 USP54Q70EL1 1684 aa17■□□□□ 0.31
EPB42-202ENST00000441366 ATF7IPQ6VMQ6 1270 aa17■□□□□ 0.31
EPB42-202ENST00000441366 LRRC59Q96AG4 307 aaKnown RBP17■□□□□ 0.31
EPB42-202ENST00000441366 LMTK3Q96Q04 1460 aa16.99■□□□□ 0.31
EPB42-202ENST00000441366 NBPF6Q5VWK0 638 aa16.99■□□□□ 0.31
EPB42-202ENST00000441366 RTF1Q92541 710 aaKnown RBP16.99■□□□□ 0.31
EPB42-202ENST00000441366 NBPF4Q96M43 638 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms