RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 METP08581 1390 aa20.85■□□□□ 0.93
PMS1-213ENST00000441310 AGLP35573 1532 aa20.85■□□□□ 0.93
PMS1-213ENST00000441310 ATAD2Q6PL18 1390 aa20.84■□□□□ 0.93
PMS1-213ENST00000441310 SSFA2P28290 1259 aa20.84■□□□□ 0.93
PMS1-213ENST00000441310 SMC5Q8IY18 1101 aa20.84■□□□□ 0.93
PMS1-213ENST00000441310 NCOA3Q9Y6Q9 1424 aa20.84■□□□□ 0.93
PMS1-213ENST00000441310 KIF13AQ9H1H9 1805 aa20.83■□□□□ 0.93
PMS1-213ENST00000441310 RARSP54136 660 aaKnown RBP20.83■□□□□ 0.93
PMS1-213ENST00000441310 MTERF4Q7Z6M4 381 aaKnown RBP20.83■□□□□ 0.93
PMS1-213ENST00000441310 CIZ1Q9ULV3 898 aaPredicted RBP20.83■□□□□ 0.93
PMS1-213ENST00000441310 DYNC1I1O14576 645 aa20.83■□□□□ 0.92
PMS1-213ENST00000441310 PDE4CQ08493 712 aa20.83■□□□□ 0.92
PMS1-213ENST00000441310 NOL7Q9UMY1 257 aaKnown RBP20.83■□□□□ 0.92
PMS1-213ENST00000441310 GOLGA6L22H0YM25 854 aa20.82■□□□□ 0.92
PMS1-213ENST00000441310 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.82■□□□□ 0.92
PMS1-213ENST00000441310 ZRANB1Q9UGI0 708 aa20.82■□□□□ 0.92
PMS1-213ENST00000441310 PTMSP20962 102 aa20.82■□□□□ 0.92
PMS1-213ENST00000441310 ABCC11Q96J66 1382 aa20.82■□□□□ 0.92
PMS1-213ENST00000441310 TRHP20396 242 aaPredicted RBP20.81■□□□□ 0.92
PMS1-213ENST00000441310 ZNF500O60304 480 aaPredicted RBP20.81■□□□□ 0.92
PMS1-213ENST00000441310 SLC26A8Q96RN1 970 aa20.81■□□□□ 0.92
PMS1-213ENST00000441310 DMTNQ08495 405 aa20.8■□□□□ 0.92
PMS1-213ENST00000441310 TNRQ92752 1358 aa20.79■□□□□ 0.92
PMS1-213ENST00000441310 CAVIN1Q6NZI2 390 aaKnown RBP20.79■□□□□ 0.92
PMS1-213ENST00000441310 BBXQ8WY36 941 aaPredicted RBP20.79■□□□□ 0.92
PMS1-213ENST00000441310 SNX21Q969T3 373 aa20.79■□□□□ 0.92
PMS1-213ENST00000441310 CD2BP2O95400 341 aaKnown RBP20.78■□□□□ 0.92
PMS1-213ENST00000441310 KLHL40Q2TBA0 621 aa20.78■□□□□ 0.92
PMS1-213ENST00000441310 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.78■□□□□ 0.92
PMS1-213ENST00000441310 CD163L1Q9NR16 1453 aa20.77■□□□□ 0.92
PMS1-213ENST00000441310 ARHGEF40Q8TER5 1519 aa20.77■□□□□ 0.92
PMS1-213ENST00000441310 SPATA31D1Q6ZQQ2 1576 aa20.77■□□□□ 0.92
PMS1-213ENST00000441310 CCDC94Q9BW85 323 aaPredicted RBP20.77■□□□□ 0.92
PMS1-213ENST00000441310 RBSNQ9H1K0 784 aa20.77■□□□□ 0.92
PMS1-213ENST00000441310 WASLO00401 505 aaPredicted RBP20.77■□□□□ 0.92
PMS1-213ENST00000441310 NME9Q86XW9 330 aa20.77■□□□□ 0.92
PMS1-213ENST00000441310 NSD2O96028 1365 aa20.76■□□□□ 0.91
PMS1-213ENST00000441310 ZSCAN20P17040 1043 aaPredicted RBP20.76■□□□□ 0.91
PMS1-213ENST00000441310 LTKP29376 864 aa20.76■□□□□ 0.91
PMS1-213ENST00000441310 JARID2Q92833 1246 aaPredicted RBP20.76■□□□□ 0.91
PMS1-213ENST00000441310 TSR2Q969E8 191 aaKnown RBP20.76■□□□□ 0.91
PMS1-213ENST00000441310 SASS6Q6UVJ0 657 aa20.76■□□□□ 0.91
PMS1-213ENST00000441310 ZKSCAN5Q9Y2L8 839 aa20.76■□□□□ 0.91
PMS1-213ENST00000441310 REREQ9P2R6 1566 aa20.76■□□□□ 0.91
PMS1-213ENST00000441310 HS1BP3Q53T59 392 aa20.76■□□□□ 0.91
PMS1-213ENST00000441310 CSPP1Q1MSJ5 1256 aa20.75■□□□□ 0.91
PMS1-213ENST00000441310 NUDT16Q96DE0 195 aaKnown RBP20.75■□□□□ 0.91
PMS1-213ENST00000441310 SHPRHQ149N8 1683 aa20.75■□□□□ 0.91
PMS1-213ENST00000441310 BAG4O95429 457 aaKnown RBP20.74■□□□□ 0.91
PMS1-213ENST00000441310 RBM25P49756 843 aaKnown RBP20.74■□□□□ 0.91
PMS1-213ENST00000441310 UTP14CQ5TAP6 766 aaKnown RBP20.74■□□□□ 0.91
PMS1-213ENST00000441310 MCTP1Q6DN14 999 aa20.74■□□□□ 0.91
PMS1-213ENST00000441310 DIAPH1O60610 1272 aaKnown RBP20.74■□□□□ 0.91
PMS1-213ENST00000441310 CBX1P83916 185 aa20.74■□□□□ 0.91
PMS1-213ENST00000441310 FTSJ3Q8IY81 847 aaKnown RBP20.74■□□□□ 0.91
PMS1-213ENST00000441310 TSC1Q92574 1164 aa20.74■□□□□ 0.91
PMS1-213ENST00000441310 RBM42Q9BTD8 480 aaKnown RBP20.74■□□□□ 0.91
PMS1-213ENST00000441310 HDGFP51858 240 aaKnown RBP20.73■□□□□ 0.91
PMS1-213ENST00000441310 EMILIN1Q9Y6C2 1016 aa20.73■□□□□ 0.91
PMS1-213ENST00000441310 HMOX1P09601 288 aa20.73■□□□□ 0.91
PMS1-213ENST00000441310 ZSCAN23Q3MJ62 389 aa20.73■□□□□ 0.91
PMS1-213ENST00000441310 MVPQ14764 893 aaKnown RBP20.72■□□□□ 0.91
PMS1-213ENST00000441310 NGEFQ8N5V2 710 aa20.72■□□□□ 0.91
PMS1-213ENST00000441310 GAS2L2Q8NHY3 880 aa20.72■□□□□ 0.91
PMS1-213ENST00000441310 SOX12O15370 315 aa20.71■□□□□ 0.91
PMS1-213ENST00000441310 PRIM1P49642 420 aaKnown RBP20.71■□□□□ 0.91
PMS1-213ENST00000441310 ZNF445P59923 1031 aa20.71■□□□□ 0.91
PMS1-213ENST00000441310 PDLIM2Q96JY6 352 aa20.71■□□□□ 0.91
PMS1-213ENST00000441310 POLKQ9UBT6 870 aa20.71■□□□□ 0.91
PMS1-213ENST00000441310 K7ELQ4 463 aaPredicted RBP20.7■□□□□ 0.9
PMS1-213ENST00000441310 TMPOP42166 694 aaKnown RBP20.7■□□□□ 0.9
PMS1-213ENST00000441310 IBTKQ9P2D0 1353 aaPredicted RBP20.7■□□□□ 0.9
PMS1-213ENST00000441310 RRS1Q15050 365 aaKnown RBP20.7■□□□□ 0.9
PMS1-213ENST00000441310 DNTTIP2Q5QJE6 756 aaKnown RBP20.7■□□□□ 0.9
PMS1-213ENST00000441310 TMEM2Q9UHN6 1383 aa20.69■□□□□ 0.9
PMS1-213ENST00000441310 PPIP5K1Q6PFW1 1433 aa20.69■□□□□ 0.9
PMS1-213ENST00000441310 PPP4R3BQ5MIZ7 849 aa20.69■□□□□ 0.9
PMS1-213ENST00000441310 WDR63Q8IWG1 891 aa20.68■□□□□ 0.9
PMS1-213ENST00000441310 RBM27Q9P2N5 1060 aaKnown RBP20.68■□□□□ 0.9
PMS1-213ENST00000441310 PHF23Q9BUL5 403 aaPredicted RBP20.68■□□□□ 0.9
PMS1-213ENST00000441310 CCDC61Q9Y6R9 512 aa20.68■□□□□ 0.9
PMS1-213ENST00000441310 USP32Q8NFA0 1604 aa20.68■□□□□ 0.9
PMS1-213ENST00000441310 PLEKHF1Q96S99 279 aa20.68■□□□□ 0.9
PMS1-213ENST00000441310 GTF2E1P29083 439 aaPredicted RBP20.67■□□□□ 0.9
PMS1-213ENST00000441310 KIF2CQ99661 725 aa20.67■□□□□ 0.9
PMS1-213ENST00000441310 DZIP1LQ8IYY4 767 aaKnown RBP20.67■□□□□ 0.9
PMS1-213ENST00000441310 LNPKQ9C0E8 428 aa20.67■□□□□ 0.9
PMS1-213ENST00000441310 ROBO2Q9HCK4 1378 aa20.67■□□□□ 0.9
PMS1-213ENST00000441310 AK9Q5TCS8 1911 aa20.66■□□□□ 0.9
PMS1-213ENST00000441310 PRR36Q9H6K5 1346 aa20.66■□□□□ 0.9
PMS1-213ENST00000441310 PRKAR2BP31323 418 aa20.66■□□□□ 0.9
PMS1-213ENST00000441310 TRIM35Q9UPQ4 493 aa20.66■□□□□ 0.9
PMS1-213ENST00000441310 EXOSC9Q06265 439 aaKnown RBP20.65■□□□□ 0.9
PMS1-213ENST00000441310 ITPRIPQ8IWB1 547 aa20.65■□□□□ 0.9
PMS1-213ENST00000441310 FAM177BA6PVY3 158 aa20.65■□□□□ 0.9
PMS1-213ENST00000441310 PTMAP06454 111 aaKnown RBP20.65■□□□□ 0.9
PMS1-213ENST00000441310 ZKSCAN2Q63HK3 967 aa20.65■□□□□ 0.9
PMS1-213ENST00000441310 THUMPD2Q9BTF0 503 aaKnown RBP20.65■□□□□ 0.9
PMS1-213ENST00000441310 BCL11BQ9C0K0 894 aaPredicted RBP20.65■□□□□ 0.9
PMS1-213ENST00000441310 CCDC39Q9UFE4 941 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms