RNA–Protein interactions for RNA: ENST00000441090.6

LRCH3-207, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2 BASIC

Gene LRCH3, Length 2,034 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-207ENST00000441090 PTPRUQ92729 1446 aa23.99■■□□□ 1.43
LRCH3-207ENST00000441090 FER1L4A9Z1Z3 1794 aa23.99■■□□□ 1.43
LRCH3-207ENST00000441090 BRPF1P55201 1214 aaPredicted RBP23.98■■□□□ 1.43
LRCH3-207ENST00000441090 OVOS2A0A0J9YW53 1432 aa23.98■■□□□ 1.43
LRCH3-207ENST00000441090 PLEKHG3A1L390 1219 aa23.98■■□□□ 1.43
LRCH3-207ENST00000441090 OVOS2Q6IE36 1432 aa23.98■■□□□ 1.43
LRCH3-207ENST00000441090 ITPRIPQ8IWB1 547 aa23.98■■□□□ 1.43
LRCH3-207ENST00000441090 TTC21BQ7Z4L5 1316 aa23.97■■□□□ 1.43
LRCH3-207ENST00000441090 CEBPAP49715 358 aaPredicted RBP23.97■■□□□ 1.43
LRCH3-207ENST00000441090 IFT57Q9NWB7 429 aa23.97■■□□□ 1.43
LRCH3-207ENST00000441090 EID1Q9Y6B2 187 aa23.96■■□□□ 1.43
LRCH3-207ENST00000441090 ACEP12821 1306 aa23.96■■□□□ 1.43
LRCH3-207ENST00000441090 USP6P35125 1406 aa23.96■■□□□ 1.43
LRCH3-207ENST00000441090 GNAI1P63096 354 aa23.96■■□□□ 1.43
LRCH3-207ENST00000441090 HDAC1Q13547 482 aaPredicted RBP23.96■■□□□ 1.43
LRCH3-207ENST00000441090 RTL5Q5HYW3 569 aaPredicted RBP23.96■■□□□ 1.43
LRCH3-207ENST00000441090 TMEM57Q8N5G2 664 aa23.96■■□□□ 1.43
LRCH3-207ENST00000441090 LAS1LQ9Y4W2 734 aaKnown RBP23.96■■□□□ 1.43
LRCH3-207ENST00000441090 ZNF853P0CG23 659 aa23.95■■□□□ 1.42
LRCH3-207ENST00000441090 LMOD3Q0VAK6 560 aa23.95■■□□□ 1.42
LRCH3-207ENST00000441090 THUMPD2Q9BTF0 503 aaKnown RBP23.94■■□□□ 1.42
LRCH3-207ENST00000441090 USP19O94966 1318 aa23.94■■□□□ 1.42
LRCH3-207ENST00000441090 SLC26A8Q96RN1 970 aa23.93■■□□□ 1.42
LRCH3-207ENST00000441090 VAMP4O75379 141 aa23.93■■□□□ 1.42
LRCH3-207ENST00000441090 PTCH1Q13635 1447 aa23.93■■□□□ 1.42
LRCH3-207ENST00000441090 DIP2AQ14689 1571 aa23.93■■□□□ 1.42
LRCH3-207ENST00000441090 PEAK1Q9H792 1746 aa23.92■■□□□ 1.42
LRCH3-207ENST00000441090 ZBTB40Q9NUA8 1239 aa23.92■■□□□ 1.42
LRCH3-207ENST00000441090 DAXXQ9UER7 740 aaPredicted RBP23.91■■□□□ 1.42
LRCH3-207ENST00000441090 RGPD1P0DJD0 1748 aa23.91■■□□□ 1.42
LRCH3-207ENST00000441090 MBIPQ9NS73 344 aa23.91■■□□□ 1.42
LRCH3-207ENST00000441090 SSH2Q76I76 1423 aa23.9■■□□□ 1.42
LRCH3-207ENST00000441090 SEC24BO95487 1268 aa23.9■■□□□ 1.42
LRCH3-207ENST00000441090 TBX22Q9Y458 520 aa23.9■■□□□ 1.42
LRCH3-207ENST00000441090 RGPD8O14715 1765 aaPredicted RBP23.9■■□□□ 1.42
LRCH3-207ENST00000441090 USP31Q70CQ4 1352 aa23.9■■□□□ 1.42
LRCH3-207ENST00000441090 RIMS1Q86UR5 1692 aaKnown RBP23.9■■□□□ 1.42
LRCH3-207ENST00000441090 CFAP44Q96MT7 982 aa23.89■■□□□ 1.42
LRCH3-207ENST00000441090 USP35Q9P2H5 1018 aa23.89■■□□□ 1.42
LRCH3-207ENST00000441090 DEKP35659 375 aaKnown RBP23.89■■□□□ 1.41
LRCH3-207ENST00000441090 EIF4A2Q14240 407 aaKnown RBP23.89■■□□□ 1.41
LRCH3-207ENST00000441090 MRPL50Q8N5N7 158 aaKnown RBP23.89■■□□□ 1.41
LRCH3-207ENST00000441090 AMOTL2Q9Y2J4 779 aa23.89■■□□□ 1.41
LRCH3-207ENST00000441090 FMN2Q9NZ56 1722 aa23.88■■□□□ 1.41
LRCH3-207ENST00000441090 NUTM2FA1L443 756 aa23.88■■□□□ 1.41
LRCH3-207ENST00000441090 SLC4A3P48751 1232 aa23.88■■□□□ 1.41
LRCH3-207ENST00000441090 ARHGAP45Q92619 1136 aa23.88■■□□□ 1.41
LRCH3-207ENST00000441090 TSPYL6Q8N831 410 aa23.88■■□□□ 1.41
LRCH3-207ENST00000441090 PIK3R4Q99570 1358 aa23.87■■□□□ 1.41
LRCH3-207ENST00000441090 SMC5Q8IY18 1101 aa23.87■■□□□ 1.41
LRCH3-207ENST00000441090 XRN1Q8IZH2 1706 aaKnown RBP23.87■■□□□ 1.41
LRCH3-207ENST00000441090 TTC21AQ8NDW8 1320 aa23.84■■□□□ 1.41
LRCH3-207ENST00000441090 FAM83GA6ND36 823 aa23.84■■□□□ 1.41
LRCH3-207ENST00000441090 TWISTNBQ3B726 338 aaPredicted RBP23.84■■□□□ 1.41
LRCH3-207ENST00000441090 SULT6B1Q6IMI4 303 aa23.84■■□□□ 1.41
LRCH3-207ENST00000441090 THEMISQ8N1K5 641 aaPredicted RBP23.84■■□□□ 1.41
LRCH3-207ENST00000441090 AEBP1Q8IUX7 1158 aa23.83■■□□□ 1.41
LRCH3-207ENST00000441090 CHMP4BQ9H444 224 aaKnown RBP23.81■■□□□ 1.4
LRCH3-207ENST00000441090 C8orf58Q8NAV2 365 aa23.81■■□□□ 1.4
LRCH3-207ENST00000441090 ABCC4O15439 1325 aa23.8■■□□□ 1.4
LRCH3-207ENST00000441090 ELL2O00472 640 aaPredicted RBP23.8■■□□□ 1.4
LRCH3-207ENST00000441090 DCTN1Q14203 1278 aa23.8■■□□□ 1.4
LRCH3-207ENST00000441090 HSP90AB2PQ58FF8 381 aa23.8■■□□□ 1.4
LRCH3-207ENST00000441090 PIK3C2AO00443 1686 aa23.8■■□□□ 1.4
LRCH3-207ENST00000441090 ZBTB7BO15156 539 aaPredicted RBP23.79■■□□□ 1.4
LRCH3-207ENST00000441090 UPF2Q9HAU5 1272 aaKnown RBP23.79■■□□□ 1.4
LRCH3-207ENST00000441090 PLPPR3Q6T4P5 718 aa23.78■■□□□ 1.4
LRCH3-207ENST00000441090 TBC1D32Q96NH3 1257 aa23.77■■□□□ 1.4
LRCH3-207ENST00000441090 ARHGEF10O15013 1369 aa23.77■■□□□ 1.4
LRCH3-207ENST00000441090 ANKARQ7Z5J8 1434 aa23.76■■□□□ 1.39
LRCH3-207ENST00000441090 NUCB1Q02818 461 aa23.76■■□□□ 1.39
LRCH3-207ENST00000441090 SBNO1A3KN83 1393 aa23.75■■□□□ 1.39
LRCH3-207ENST00000441090 MAP3K19Q56UN5 1328 aa23.75■■□□□ 1.39
LRCH3-207ENST00000441090 API5Q9BZZ5 524 aaKnown RBP23.75■■□□□ 1.39
LRCH3-207ENST00000441090 FLT4P35916 1363 aa23.74■■□□□ 1.39
LRCH3-207ENST00000441090 NGDNQ8NEJ9 315 aaKnown RBP23.74■■□□□ 1.39
LRCH3-207ENST00000441090 CEP170BQ9Y4F5 1589 aaPredicted RBP23.74■■□□□ 1.39
LRCH3-207ENST00000441090 USP54Q70EL1 1684 aa23.74■■□□□ 1.39
LRCH3-207ENST00000441090 MARF1Q9Y4F3 1742 aaKnown RBP23.73■■□□□ 1.39
LRCH3-207ENST00000441090 CHL1O00533 1208 aa23.73■■□□□ 1.39
LRCH3-207ENST00000441090 BECN1Q14457 450 aa23.73■■□□□ 1.39
LRCH3-207ENST00000441090 NFKBIBQ15653 356 aa23.72■■□□□ 1.39
LRCH3-207ENST00000441090 SOX12O15370 315 aa23.72■■□□□ 1.39
LRCH3-207ENST00000441090 HAP1P54257 671 aaPredicted RBP23.72■■□□□ 1.39
LRCH3-207ENST00000441090 KIF24Q5T7B8 1368 aa23.72■■□□□ 1.39
LRCH3-207ENST00000441090 KIAA0232Q92628 1395 aa23.72■■□□□ 1.39
LRCH3-207ENST00000441090 MCM10Q7L590 875 aa23.71■■□□□ 1.39
LRCH3-207ENST00000441090 CHD1LQ86WJ1 897 aa23.71■■□□□ 1.39
LRCH3-207ENST00000441090 GCC1Q96CN9 775 aa23.71■■□□□ 1.39
LRCH3-207ENST00000441090 KDRP35968 1356 aa23.7■■□□□ 1.39
LRCH3-207ENST00000441090 CRB1P82279 1406 aa23.69■■□□□ 1.38
LRCH3-207ENST00000441090 KCNA6P17658 529 aa23.68■■□□□ 1.38
LRCH3-207ENST00000441090 C1orf115Q9H7X2 142 aa23.68■■□□□ 1.38
LRCH3-207ENST00000441090 CHD2O14647 1828 aaKnown RBP23.67■■□□□ 1.38
LRCH3-207ENST00000441090 LNPKQ9C0E8 428 aa23.67■■□□□ 1.38
LRCH3-207ENST00000441090 IGSF1Q8N6C5 1336 aa23.67■■□□□ 1.38
LRCH3-207ENST00000441090 RGS12O14924 1447 aa23.66■■□□□ 1.38
LRCH3-207ENST00000441090 SIRT2Q8IXJ6 389 aa23.66■■□□□ 1.38
LRCH3-207ENST00000441090 AMPHP49418 695 aa23.65■■□□□ 1.38
LRCH3-207ENST00000441090 KRT24Q2M2I5 525 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms