RNA–Protein interactions for RNA: ENST00000440731.4

PGBD4P3-201, Transcript of piggyBac transposable element derived 4 pseudogene 3, humanhuman

BASIC

Gene PGBD4P3, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4P3-201ENST00000440731 GTF3C3Q9Y5Q9 886 aa7.6□□□□□ -1.19
PGBD4P3-201ENST00000440731 WIPF1O43516 503 aa7.59□□□□□ -1.19
PGBD4P3-201ENST00000440731 NR1H3Q13133 447 aa7.59□□□□□ -1.19
PGBD4P3-201ENST00000440731 CLUAP1Q96AJ1 413 aa7.59□□□□□ -1.19
PGBD4P3-201ENST00000440731 CDK15Q96Q40 435 aa7.59□□□□□ -1.19
PGBD4P3-201ENST00000440731 GPR37L1O60883 481 aa7.58□□□□□ -1.2
PGBD4P3-201ENST00000440731 GRM5P41594 1212 aa7.58□□□□□ -1.2
PGBD4P3-201ENST00000440731 NFX1Q12986 1120 aaKnown RBP7.58□□□□□ -1.2
PGBD4P3-201ENST00000440731 TRMT44Q8IYL2 757 aaKnown RBP7.58□□□□□ -1.2
PGBD4P3-201ENST00000440731 KCTD15Q96SI1 283 aaPredicted RBP7.58□□□□□ -1.2
PGBD4P3-201ENST00000440731 ZNF330Q9Y3S2 320 aaPredicted RBP7.58□□□□□ -1.2
PGBD4P3-201ENST00000440731 AXIN1O15169 862 aa7.57□□□□□ -1.2
PGBD4P3-201ENST00000440731 IRF5Q13568 498 aa7.57□□□□□ -1.2
PGBD4P3-201ENST00000440731 MPNDQ8N594 471 aa7.57□□□□□ -1.2
PGBD4P3-201ENST00000440731 NR3C2P08235 984 aa7.56□□□□□ -1.2
PGBD4P3-201ENST00000440731 NR5A1Q13285 461 aa7.56□□□□□ -1.2
PGBD4P3-201ENST00000440731 WWC1Q8IX03 1113 aa7.56□□□□□ -1.2
PGBD4P3-201ENST00000440731 DACH1Q9UI36 760 aa7.56□□□□□ -1.2
PGBD4P3-201ENST00000440731 C11orf95C9JLR9 678 aaPredicted RBP7.55□□□□□ -1.2
PGBD4P3-201ENST00000440731 CAPN5O15484 640 aaPredicted RBP7.55□□□□□ -1.2
PGBD4P3-201ENST00000440731 WDR4P57081 412 aaKnown RBP7.55□□□□□ -1.2
PGBD4P3-201ENST00000440731 NBPF20Q3BBV1 942 aa7.55□□□□□ -1.2
PGBD4P3-201ENST00000440731 CDV3Q9UKY7 258 aaKnown RBP7.55□□□□□ -1.2
PGBD4P3-201ENST00000440731 MAP4K5Q9Y4K4 846 aa7.55□□□□□ -1.2
PGBD4P3-201ENST00000440731 GIGYF1O75420 1035 aaPredicted RBP7.54□□□□□ -1.2
PGBD4P3-201ENST00000440731 ZIC2O95409 532 aaPredicted RBP7.54□□□□□ -1.2
PGBD4P3-201ENST00000440731 EIF4G2P78344 907 aaKnown RBP eCLIP7.54□□□□□ -1.2
PGBD4P3-201ENST00000440731 WASHC4Q2M389 1173 aa7.54□□□□□ -1.2
PGBD4P3-201ENST00000440731 CCDC116Q8IYX3 515 aa7.54□□□□□ -1.2
PGBD4P3-201ENST00000440731 GMPR2Q9P2T1 348 aaKnown RBP7.54□□□□□ -1.2
PGBD4P3-201ENST00000440731 AVPP01185 164 aa7.53□□□□□ -1.2
PGBD4P3-201ENST00000440731 SEMA3FQ13275 785 aa7.53□□□□□ -1.2
PGBD4P3-201ENST00000440731 ITPKCQ96DU7 683 aa7.53□□□□□ -1.2
PGBD4P3-201ENST00000440731 ZFAND3Q9H8U3 227 aa7.53□□□□□ -1.2
PGBD4P3-201ENST00000440731 CTC1Q2NKJ3 1217 aa7.52□□□□□ -1.21
PGBD4P3-201ENST00000440731 INTS6LQ5JSJ4 861 aaKnown RBP7.52□□□□□ -1.21
PGBD4P3-201ENST00000440731 TMPRSS4Q9NRS4 437 aa7.52□□□□□ -1.21
PGBD4P3-201ENST00000440731 PPP1R26Q5T8A7 1209 aaPredicted RBP7.51□□□□□ -1.21
PGBD4P3-201ENST00000440731 POM121CA8CG34 1229 aa7.5□□□□□ -1.21
PGBD4P3-201ENST00000440731 ERVH48-1M5A8F1 160 aa7.5□□□□□ -1.21
PGBD4P3-201ENST00000440731 BMP1P13497 986 aa7.5□□□□□ -1.21
PGBD4P3-201ENST00000440731 TIMP2P16035 220 aa7.5□□□□□ -1.21
PGBD4P3-201ENST00000440731 DHX9Q08211 1270 aaKnown RBP7.5□□□□□ -1.21
PGBD4P3-201ENST00000440731 CRIPAKQ8N1N5 446 aa7.5□□□□□ -1.21
PGBD4P3-201ENST00000440731 ZNF592Q92610 1267 aa7.5□□□□□ -1.21
PGBD4P3-201ENST00000440731 PGPEP1Q9NXJ5 209 aa7.5□□□□□ -1.21
PGBD4P3-201ENST00000440731 CEP126Q9P2H0 1117 aa7.5□□□□□ -1.21
PGBD4P3-201ENST00000440731 EMILIN1Q9Y6C2 1016 aa7.5□□□□□ -1.21
PGBD4P3-201ENST00000440731 MCCD1P59942 119 aaPredicted RBP7.49□□□□□ -1.21
PGBD4P3-201ENST00000440731 LCE2CQ5TA81 110 aa7.49□□□□□ -1.21
PGBD4P3-201ENST00000440731 PROSER2Q86WR7 435 aaPredicted RBP7.49□□□□□ -1.21
PGBD4P3-201ENST00000440731 CBLBQ13191 982 aa7.48□□□□□ -1.21
PGBD4P3-201ENST00000440731 SLFNL1Q499Z3 407 aa7.48□□□□□ -1.21
PGBD4P3-201ENST00000440731 KLF16Q9BXK1 252 aaPredicted RBP7.48□□□□□ -1.21
PGBD4P3-201ENST00000440731 CYLDQ9NQC7 956 aa7.48□□□□□ -1.21
PGBD4P3-201ENST00000440731 ESPNB1AK53 854 aa7.47□□□□□ -1.21
PGBD4P3-201ENST00000440731 SMCPP49901 116 aaPredicted RBP7.47□□□□□ -1.21
PGBD4P3-201ENST00000440731 C6orf118Q5T5N4 469 aa7.47□□□□□ -1.21
PGBD4P3-201ENST00000440731 RNF20Q5VTR2 975 aa7.47□□□□□ -1.21
PGBD4P3-201ENST00000440731 ZNF784Q8NCA9 323 aaPredicted RBP7.47□□□□□ -1.21
PGBD4P3-201ENST00000440731 ESF1Q9H501 851 aaKnown RBP7.47□□□□□ -1.21
PGBD4P3-201ENST00000440731 ATP13A2Q9NQ11 1180 aa7.47□□□□□ -1.21
PGBD4P3-201ENST00000440731 PCDHB11Q9Y5F2 797 aa7.47□□□□□ -1.21
PGBD4P3-201ENST00000440731 TSGA10IPQ3SY00 556 aa7.46□□□□□ -1.22
PGBD4P3-201ENST00000440731 HDGFL1Q5TGJ6 251 aa7.46□□□□□ -1.22
PGBD4P3-201ENST00000440731 SEPT12Q8IYM1 358 aa7.46□□□□□ -1.22
PGBD4P3-201ENST00000440731 PURBQ96QR8 312 aaKnown RBP7.46□□□□□ -1.22
PGBD4P3-201ENST00000440731 FAM181BA6NEQ2 426 aa7.45□□□□□ -1.22
PGBD4P3-201ENST00000440731 UPP2O95045 317 aa7.45□□□□□ -1.22
PGBD4P3-201ENST00000440731 RNF135Q8IUD6 432 aa7.45□□□□□ -1.22
PGBD4P3-201ENST00000440731 ZNF777Q9ULD5 760 aaPredicted RBP7.45□□□□□ -1.22
PGBD4P3-201ENST00000440731 BMP2P12643 396 aa7.44□□□□□ -1.22
PGBD4P3-201ENST00000440731 RELBQ01201 579 aa7.44□□□□□ -1.22
PGBD4P3-201ENST00000440731 SCARF1Q14162 830 aa7.44□□□□□ -1.22
PGBD4P3-201ENST00000440731 SUZ12Q15022 739 aaKnown RBP7.44□□□□□ -1.22
PGBD4P3-201ENST00000440731 MRPL14Q6P1L8 145 aaKnown RBP7.44□□□□□ -1.22
PGBD4P3-201ENST00000440731 TRIM46Q7Z4K8 759 aa7.44□□□□□ -1.22
PGBD4P3-201ENST00000440731 AGBL1Q96MI9 1066 aa7.44□□□□□ -1.22
PGBD4P3-201ENST00000440731 A6NJR5 290 aa7.43□□□□□ -1.22
PGBD4P3-201ENST00000440731 TERTO14746 1132 aaKnown RBP7.43□□□□□ -1.22
PGBD4P3-201ENST00000440731 ADD1P35611 737 aaKnown RBP7.43□□□□□ -1.22
PGBD4P3-201ENST00000440731 SOX11P35716 441 aa7.43□□□□□ -1.22
PGBD4P3-201ENST00000440731 OXLD1Q5BKU9 147 aa7.43□□□□□ -1.22
PGBD4P3-201ENST00000440731 C14orf37Q86TY3 774 aa7.43□□□□□ -1.22
PGBD4P3-201ENST00000440731 FNBP4Q8N3X1 1017 aaPredicted RBP7.43□□□□□ -1.22
PGBD4P3-201ENST00000440731 ZFP42Q96MM3 310 aa7.43□□□□□ -1.22
PGBD4P3-201ENST00000440731 CCDC85AQ96PX6 553 aaPredicted RBP7.43□□□□□ -1.22
PGBD4P3-201ENST00000440731 CDCA7Q9BWT1 371 aaPredicted RBP7.43□□□□□ -1.22
PGBD4P3-201ENST00000440731 ZMYND15Q9H091 742 aa7.43□□□□□ -1.22
PGBD4P3-201ENST00000440731 ALG2Q9H553 416 aa7.43□□□□□ -1.22
PGBD4P3-201ENST00000440731 ZNF395Q9H8N7 513 aaPredicted RBP7.43□□□□□ -1.22
PGBD4P3-201ENST00000440731 PIK3CDO00329 1044 aa7.42□□□□□ -1.22
PGBD4P3-201ENST00000440731 SCTRP47872 440 aa7.42□□□□□ -1.22
PGBD4P3-201ENST00000440731 LINC00528Q8N1L1 170 aa7.42□□□□□ -1.22
PGBD4P3-201ENST00000440731 CALR3Q96L12 384 aaKnown RBP7.42□□□□□ -1.22
PGBD4P3-201ENST00000440731 DOLKQ9UPQ8 538 aa7.42□□□□□ -1.22
PGBD4P3-201ENST00000440731 TRAK2O60296 914 aa7.41□□□□□ -1.22
PGBD4P3-201ENST00000440731 LILRA1O75019 489 aa7.41□□□□□ -1.22
PGBD4P3-201ENST00000440731 SKIP12755 728 aa7.41□□□□□ -1.22
PGBD4P3-201ENST00000440731 MEIOBQ8N635 442 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms