RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 NME9Q86XW9 330 aa10.51□□□□□ -0.73
SPIRE1-204ENST00000440472 DZIP1LQ8IYY4 767 aaKnown RBP10.51□□□□□ -0.73
SPIRE1-204ENST00000440472 IFT57Q9NWB7 429 aa10.51□□□□□ -0.73
SPIRE1-204ENST00000440472 RGPD1P0DJD0 1748 aa10.51□□□□□ -0.73
SPIRE1-204ENST00000440472 RLBP1P12271 317 aa10.51□□□□□ -0.73
SPIRE1-204ENST00000440472 PRKAR2BP31323 418 aa10.51□□□□□ -0.73
SPIRE1-204ENST00000440472 ARHGAP45Q92619 1136 aa10.51□□□□□ -0.73
SPIRE1-204ENST00000440472 RWDD1Q9H446 243 aaPredicted RBP10.51□□□□□ -0.73
SPIRE1-204ENST00000440472 DDX19BQ9UMR2 479 aa10.5□□□□□ -0.73
SPIRE1-204ENST00000440472 GNAI1P63096 354 aa10.49□□□□□ -0.73
SPIRE1-204ENST00000440472 HDAC1Q13547 482 aaPredicted RBP10.49□□□□□ -0.73
SPIRE1-204ENST00000440472 ATF7IPQ6VMQ6 1270 aa10.49□□□□□ -0.73
SPIRE1-204ENST00000440472 SSH1Q8WYL5 1049 aa10.49□□□□□ -0.73
SPIRE1-204ENST00000440472 FRAT1Q92837 279 aaPredicted RBP10.49□□□□□ -0.73
SPIRE1-204ENST00000440472 CHMP4BQ9H444 224 aaKnown RBP10.49□□□□□ -0.73
SPIRE1-204ENST00000440472 KIF24Q5T7B8 1368 aa10.49□□□□□ -0.73
SPIRE1-204ENST00000440472 EMILIN1Q9Y6C2 1016 aa10.49□□□□□ -0.73
SPIRE1-204ENST00000440472 ACEP12821 1306 aa10.48□□□□□ -0.73
SPIRE1-204ENST00000440472 TSR2Q969E8 191 aaKnown RBP10.48□□□□□ -0.73
SPIRE1-204ENST00000440472 SMC4Q9NTJ3 1288 aa10.48□□□□□ -0.73
SPIRE1-204ENST00000440472 ZNF142P52746 1687 aaPredicted RBP10.48□□□□□ -0.73
SPIRE1-204ENST00000440472 SENP3Q9H4L4 574 aaPredicted RBP10.48□□□□□ -0.73
SPIRE1-204ENST00000440472 AMOTL2Q9Y2J4 779 aa10.48□□□□□ -0.73
SPIRE1-204ENST00000440472 PCDHB15Q9Y5E8 787 aa10.48□□□□□ -0.73
SPIRE1-204ENST00000440472 DLG5Q8TDM6 1919 aa10.48□□□□□ -0.73
SPIRE1-204ENST00000440472 CEP170BQ9Y4F5 1589 aaPredicted RBP10.47□□□□□ -0.73
SPIRE1-204ENST00000440472 TRIM27P14373 513 aa10.47□□□□□ -0.73
SPIRE1-204ENST00000440472 FTSJ3Q8IY81 847 aaKnown RBP10.47□□□□□ -0.73
SPIRE1-204ENST00000440472 ARHGEF10O15013 1369 aa10.47□□□□□ -0.73
SPIRE1-204ENST00000440472 PAK3O75914 559 aaPredicted RBP10.46□□□□□ -0.73
SPIRE1-204ENST00000440472 HAP1P54257 671 aaPredicted RBP10.46□□□□□ -0.73
SPIRE1-204ENST00000440472 PHACTR3Q96KR7 559 aa10.46□□□□□ -0.73
SPIRE1-204ENST00000440472 CFAP44Q96MT7 982 aa10.46□□□□□ -0.73
SPIRE1-204ENST00000440472 FMN2Q9NZ56 1722 aa10.46□□□□□ -0.73
SPIRE1-204ENST00000440472 PEAK1Q9H792 1746 aa10.45□□□□□ -0.74
SPIRE1-204ENST00000440472 VAMP4O75379 141 aa10.45□□□□□ -0.74
SPIRE1-204ENST00000440472 ZRANB1Q9UGI0 708 aa10.45□□□□□ -0.74
SPIRE1-204ENST00000440472 ZBTB40Q9NUA8 1239 aa10.45□□□□□ -0.74
SPIRE1-204ENST00000440472 NOB1Q9ULX3 412 aaKnown RBP10.45□□□□□ -0.74
SPIRE1-204ENST00000440472 NCKAP5LQ9HCH0 1330 aa10.44□□□□□ -0.74
SPIRE1-204ENST00000440472 SBNO1A3KN83 1393 aa10.44□□□□□ -0.74
SPIRE1-204ENST00000440472 CEBPAP49715 358 aaPredicted RBP10.44□□□□□ -0.74
SPIRE1-204ENST00000440472 EIF4A2Q14240 407 aaKnown RBP10.44□□□□□ -0.74
SPIRE1-204ENST00000440472 SMC5Q8IY18 1101 aa10.44□□□□□ -0.74
SPIRE1-204ENST00000440472 MRPL50Q8N5N7 158 aaKnown RBP10.44□□□□□ -0.74
SPIRE1-204ENST00000440472 TNNQ9UQP3 1299 aa10.44□□□□□ -0.74
SPIRE1-204ENST00000440472 KDRP35968 1356 aa10.44□□□□□ -0.74
SPIRE1-204ENST00000440472 KIAA0232Q92628 1395 aa10.44□□□□□ -0.74
SPIRE1-204ENST00000440472 PPM1GO15355 546 aaPredicted RBP10.43□□□□□ -0.74
SPIRE1-204ENST00000440472 BCL2L13Q9BXK5 485 aa10.43□□□□□ -0.74
SPIRE1-204ENST00000440472 CHD2O14647 1828 aaKnown RBP10.43□□□□□ -0.74
SPIRE1-204ENST00000440472 HMOX1P09601 288 aa10.43□□□□□ -0.74
SPIRE1-204ENST00000440472 SKAP1Q86WV1 359 aa10.43□□□□□ -0.74
SPIRE1-204ENST00000440472 USP35Q9P2H5 1018 aa10.43□□□□□ -0.74
SPIRE1-204ENST00000440472 PDZRN3Q9UPQ7 1066 aa10.43□□□□□ -0.74
SPIRE1-204ENST00000440472 FLT4P35916 1363 aa10.43□□□□□ -0.74
SPIRE1-204ENST00000440472 PIK3C2AO00443 1686 aa10.42□□□□□ -0.74
SPIRE1-204ENST00000440472 FBLN1P23142 703 aa10.42□□□□□ -0.74
SPIRE1-204ENST00000440472 RGS3P49796 1198 aa10.42□□□□□ -0.74
SPIRE1-204ENST00000440472 RRS1Q15050 365 aaKnown RBP10.42□□□□□ -0.74
SPIRE1-204ENST00000440472 SLC26A8Q96RN1 970 aa10.42□□□□□ -0.74
SPIRE1-204ENST00000440472 ABCC4O15439 1325 aa10.42□□□□□ -0.74
SPIRE1-204ENST00000440472 ADAMTSL3P82987 1691 aa10.42□□□□□ -0.74
SPIRE1-204ENST00000440472 MBIPQ9NS73 344 aa10.42□□□□□ -0.74
SPIRE1-204ENST00000440472 SETD1BQ9UPS6 1966 aaKnown RBP10.42□□□□□ -0.74
SPIRE1-204ENST00000440472 CHL1O00533 1208 aa10.41□□□□□ -0.74
SPIRE1-204ENST00000440472 HTATSF1O43719 755 aaKnown RBP10.41□□□□□ -0.74
SPIRE1-204ENST00000440472 TMEM57Q8N5G2 664 aa10.41□□□□□ -0.74
SPIRE1-204ENST00000440472 API5Q9BZZ5 524 aaKnown RBP10.41□□□□□ -0.74
SPIRE1-204ENST00000440472 MARF1Q9Y4F3 1742 aaKnown RBP10.41□□□□□ -0.74
SPIRE1-204ENST00000440472 PLPPR3Q6T4P5 718 aa10.4□□□□□ -0.74
SPIRE1-204ENST00000440472 NPM2Q86SE8 214 aaKnown RBP10.4□□□□□ -0.74
SPIRE1-204ENST00000440472 RTL1A6NKG5 1358 aa10.4□□□□□ -0.74
SPIRE1-204ENST00000440472 USP19O94966 1318 aa10.4□□□□□ -0.74
SPIRE1-204ENST00000440472 ITPRIPQ8IWB1 547 aa10.4□□□□□ -0.74
SPIRE1-204ENST00000440472 RGPD8O14715 1765 aaPredicted RBP10.4□□□□□ -0.75
SPIRE1-204ENST00000440472 CRB1P82279 1406 aa10.39□□□□□ -0.75
SPIRE1-204ENST00000440472 SOS1Q07889 1333 aaPredicted RBP10.39□□□□□ -0.75
SPIRE1-204ENST00000440472 IGSF1Q8N6C5 1336 aa10.39□□□□□ -0.75
SPIRE1-204ENST00000440472 TWISTNBQ3B726 338 aaPredicted RBP10.39□□□□□ -0.75
SPIRE1-204ENST00000440472 MAP3K19Q56UN5 1328 aa10.39□□□□□ -0.75
SPIRE1-204ENST00000440472 ZBTB7BO15156 539 aaPredicted RBP10.39□□□□□ -0.75
SPIRE1-204ENST00000440472 SULT6B1Q6IMI4 303 aa10.39□□□□□ -0.75
SPIRE1-204ENST00000440472 BABAM1Q9NWV8 329 aa10.39□□□□□ -0.75
SPIRE1-204ENST00000440472 PHRF1Q9P1Y6 1649 aaKnown RBP10.39□□□□□ -0.75
SPIRE1-204ENST00000440472 LRRC37A3O60309 1634 aa10.38□□□□□ -0.75
SPIRE1-204ENST00000440472 ANKLE2Q86XL3 938 aa10.38□□□□□ -0.75
SPIRE1-204ENST00000440472 GCC1Q96CN9 775 aa10.38□□□□□ -0.75
SPIRE1-204ENST00000440472 NUCB1Q02818 461 aa10.37□□□□□ -0.75
SPIRE1-204ENST00000440472 NGDNQ8NEJ9 315 aaKnown RBP10.37□□□□□ -0.75
SPIRE1-204ENST00000440472 HSP90AB2PQ58FF8 381 aa10.37□□□□□ -0.75
SPIRE1-204ENST00000440472 TSPYL6Q8N831 410 aa10.37□□□□□ -0.75
SPIRE1-204ENST00000440472 PTPRCP08575 1304 aa10.36□□□□□ -0.75
SPIRE1-204ENST00000440472 KCNA6P17658 529 aa10.36□□□□□ -0.75
SPIRE1-204ENST00000440472 INTS3Q68E01 1043 aaKnown RBP10.36□□□□□ -0.75
SPIRE1-204ENST00000440472 C8orf58Q8NAV2 365 aa10.36□□□□□ -0.75
SPIRE1-204ENST00000440472 GAS2L2Q8NHY3 880 aa10.36□□□□□ -0.75
SPIRE1-204ENST00000440472 ADGRL3Q9HAR2 1447 aa10.36□□□□□ -0.75
SPIRE1-204ENST00000440472 NWD1Q149M9 1564 aa10.36□□□□□ -0.75
SPIRE1-204ENST00000440472 AEBP1Q8IUX7 1158 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms