RNA–Protein interactions for RNA: ENST00000440167.1

SMPD4P2-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 2, humanhuman

BASIC

Gene SMPD4P2, Length 1,634 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P2-201ENST00000440167 NPHP3Q7Z494 1330 aa15.12■□□□□ 0.01
SMPD4P2-201ENST00000440167 PELP1Q8IZL8 1130 aaKnown RBP15.11■□□□□ 0.01
SMPD4P2-201ENST00000440167 RSPH6AQ9H0K4 717 aa15.11■□□□□ 0.01
SMPD4P2-201ENST00000440167 SLAIN2Q9P270 581 aa15.11■□□□□ 0.01
SMPD4P2-201ENST00000440167 MAPK8IP3Q9UPT6 1336 aa15.11■□□□□ 0.01
SMPD4P2-201ENST00000440167 ZBTB7CA1YPR0 619 aa15.1■□□□□ 0.01
SMPD4P2-201ENST00000440167 PRKAR2BP31323 418 aa15.1■□□□□ 0.01
SMPD4P2-201ENST00000440167 TNS3Q68CZ2 1445 aa15.1■□□□□ 0.01
SMPD4P2-201ENST00000440167 FCHSD2O94868 740 aa15.1■□□□□ 0.01
SMPD4P2-201ENST00000440167 HOXC9P31274 260 aa15.1■□□□□ 0.01
SMPD4P2-201ENST00000440167 USP19O94966 1318 aa15.09■□□□□ 0.01
SMPD4P2-201ENST00000440167 GOLGA2Q08379 1002 aa15.09■□□□□ 0.01
SMPD4P2-201ENST00000440167 ROBO1Q9Y6N7 1651 aa15.08■□□□□ 0
SMPD4P2-201ENST00000440167 WWC1Q8IX03 1113 aa15.08■□□□□ 0
SMPD4P2-201ENST00000440167 KCNH5Q8NCM2 988 aa15.08■□□□□ 0
SMPD4P2-201ENST00000440167 PNNQ9H307 717 aaKnown RBP15.08■□□□□ 0
SMPD4P2-201ENST00000440167 SPINK5Q9NQ38 1064 aaPredicted RBP15.08■□□□□ 0
SMPD4P2-201ENST00000440167 ABCA3Q99758 1704 aa15.08■□□□□ 0
SMPD4P2-201ENST00000440167 RTL1A6NKG5 1358 aa15.07■□□□□ 0
SMPD4P2-201ENST00000440167 KIF24Q5T7B8 1368 aa15.07■□□□□ 0
SMPD4P2-201ENST00000440167 TMPOP42166 694 aaKnown RBP15.07■□□□□ 0
SMPD4P2-201ENST00000440167 AEBP1Q8IUX7 1158 aa15.07■□□□□ 0
SMPD4P2-201ENST00000440167 NGEFQ8N5V2 710 aa15.07■□□□□ 0
SMPD4P2-201ENST00000440167 GCP02774 474 aa15.06■□□□□ 0
SMPD4P2-201ENST00000440167 SULT6B1Q6IMI4 303 aa15.06■□□□□ 0
SMPD4P2-201ENST00000440167 PHACTR3Q96KR7 559 aa15.06■□□□□ 0
SMPD4P2-201ENST00000440167 SLFN5Q08AF3 891 aa15.06■□□□□ 0
SMPD4P2-201ENST00000440167 FKBP8Q14318 412 aa15.06■□□□□ 0
SMPD4P2-201ENST00000440167 LTV1Q96GA3 475 aaPredicted RBP15.06■□□□□ 0
SMPD4P2-201ENST00000440167 PHF23Q9BUL5 403 aaPredicted RBP15.06■□□□□ 0
SMPD4P2-201ENST00000440167 ARHGEF10O15013 1369 aa15.05■□□□□ 0
SMPD4P2-201ENST00000440167 NEFLP07196 543 aa15.05■□□□□ -0
SMPD4P2-201ENST00000440167 IRX6P78412 446 aaPredicted RBP15.05■□□□□ -0
SMPD4P2-201ENST00000440167 DUSP27Q5VZP5 1158 aa15.05■□□□□ -0
SMPD4P2-201ENST00000440167 SPATA31A3Q5VYP0 1347 aa15.05■□□□□ -0
SMPD4P2-201ENST00000440167 COL18A1P39060 1754 aa15.04■□□□□ -0
SMPD4P2-201ENST00000440167 NEFMP07197 916 aa15.04■□□□□ -0
SMPD4P2-201ENST00000440167 RIPK4P57078 832 aa15.04■□□□□ -0
SMPD4P2-201ENST00000440167 CCDC27Q2M243 656 aa15.04■□□□□ -0
SMPD4P2-201ENST00000440167 IP6K1Q92551 441 aa15.04■□□□□ -0
SMPD4P2-201ENST00000440167 CABLES1Q8TDN4 633 aa15.03■□□□□ -0
SMPD4P2-201ENST00000440167 EYA1Q99502 592 aa15.03■□□□□ -0
SMPD4P2-201ENST00000440167 TRIM35Q9UPQ4 493 aa15.03■□□□□ -0
SMPD4P2-201ENST00000440167 ARHGEF25Q86VW2 580 aa15.03■□□□□ -0
SMPD4P2-201ENST00000440167 SOS2Q07890 1332 aaPredicted RBP15.02■□□□□ -0
SMPD4P2-201ENST00000440167 IGSF1Q8N6C5 1336 aa15.02■□□□□ -0
SMPD4P2-201ENST00000440167 E9PSI1 815 aa15.02□□□□□ -0.01
SMPD4P2-201ENST00000440167 ZC3H6P61129 1189 aaKnown RBP15.02□□□□□ -0.01
SMPD4P2-201ENST00000440167 MYT1Q01538 1121 aa15.02□□□□□ -0.01
SMPD4P2-201ENST00000440167 NFE2L2Q16236 605 aa15.02□□□□□ -0.01
SMPD4P2-201ENST00000440167 NCBP3Q53F19 620 aaKnown RBP15.02□□□□□ -0.01
SMPD4P2-201ENST00000440167 TRMT2AQ8IZ69 625 aaKnown RBP15.02□□□□□ -0.01
SMPD4P2-201ENST00000440167 WDR63Q8IWG1 891 aa15.01□□□□□ -0.01
SMPD4P2-201ENST00000440167 RCAN3Q9UKA8 241 aa15.01□□□□□ -0.01
SMPD4P2-201ENST00000440167 CAMTA1Q9Y6Y1 1673 aa15□□□□□ -0.01
SMPD4P2-201ENST00000440167 USHBP1Q8N6Y0 703 aa15□□□□□ -0.01
SMPD4P2-201ENST00000440167 KDRP35968 1356 aa14.99□□□□□ -0.01
SMPD4P2-201ENST00000440167 VIRMAQ69YN4 1812 aaKnown RBP14.99□□□□□ -0.01
SMPD4P2-201ENST00000440167 AHDC1Q5TGY3 1603 aaPredicted RBP14.98□□□□□ -0.01
SMPD4P2-201ENST00000440167 PHLPP1O60346 1717 aa14.98□□□□□ -0.01
SMPD4P2-201ENST00000440167 AXIN2Q9Y2T1 843 aa14.98□□□□□ -0.01
SMPD4P2-201ENST00000440167 RNF123Q5XPI4 1314 aa14.97□□□□□ -0.01
SMPD4P2-201ENST00000440167 LRRC59Q96AG4 307 aaKnown RBP14.97□□□□□ -0.01
SMPD4P2-201ENST00000440167 FAM208AQ9UK61 1670 aaKnown RBP14.97□□□□□ -0.01
SMPD4P2-201ENST00000440167 NBPF6Q5VWK0 638 aa14.96□□□□□ -0.01
SMPD4P2-201ENST00000440167 ANKRD24Q8TF21 1146 aa14.96□□□□□ -0.01
SMPD4P2-201ENST00000440167 NBPF4Q96M43 638 aa14.96□□□□□ -0.01
SMPD4P2-201ENST00000440167 THUMPD2Q9BTF0 503 aaKnown RBP14.96□□□□□ -0.01
SMPD4P2-201ENST00000440167 LMO7Q8WWI1 1683 aa14.96□□□□□ -0.01
SMPD4P2-201ENST00000440167 FAM83GA6ND36 823 aa14.95□□□□□ -0.02
SMPD4P2-201ENST00000440167 CHRNA2Q15822 529 aa14.95□□□□□ -0.02
SMPD4P2-201ENST00000440167 KIAA0232Q92628 1395 aa14.95□□□□□ -0.02
SMPD4P2-201ENST00000440167 ABCC6O95255 1503 aa14.95□□□□□ -0.02
SMPD4P2-201ENST00000440167 RRP1P56182 461 aaKnown RBP14.95□□□□□ -0.02
SMPD4P2-201ENST00000440167 TSR2Q969E8 191 aaKnown RBP14.95□□□□□ -0.02
SMPD4P2-201ENST00000440167 MYH16Q9H6N6 1097 aa14.94□□□□□ -0.02
SMPD4P2-201ENST00000440167 IL16Q14005 1332 aa14.93□□□□□ -0.02
SMPD4P2-201ENST00000440167 FANCIQ9NVI1 1328 aa14.93□□□□□ -0.02
SMPD4P2-201ENST00000440167 DCTN1Q14203 1278 aa14.93□□□□□ -0.02
SMPD4P2-201ENST00000440167 MTHFSDQ2M296 383 aaKnown RBP14.93□□□□□ -0.02
SMPD4P2-201ENST00000440167 HAP1P54257 671 aaPredicted RBP14.92□□□□□ -0.02
SMPD4P2-201ENST00000440167 LMOD3Q0VAK6 560 aa14.92□□□□□ -0.02
SMPD4P2-201ENST00000440167 LAS1LQ9Y4W2 734 aaKnown RBP14.92□□□□□ -0.02
SMPD4P2-201ENST00000440167 COL16A1Q07092 1604 aaPredicted RBP14.92□□□□□ -0.02
SMPD4P2-201ENST00000440167 COL22A1Q8NFW1 1626 aaPredicted RBP14.92□□□□□ -0.02
SMPD4P2-201ENST00000440167 CPDO75976 1380 aa14.92□□□□□ -0.02
SMPD4P2-201ENST00000440167 ERBB3P21860 1342 aa14.92□□□□□ -0.02
SMPD4P2-201ENST00000440167 NCAPD2Q15021 1401 aa14.92□□□□□ -0.02
SMPD4P2-201ENST00000440167 LRRC37A3O60309 1634 aa14.92□□□□□ -0.02
SMPD4P2-201ENST00000440167 PLIN1O60240 522 aa14.91□□□□□ -0.02
SMPD4P2-201ENST00000440167 MCM10Q7L590 875 aa14.91□□□□□ -0.02
SMPD4P2-201ENST00000440167 PIP4K2BP78356 416 aa14.89□□□□□ -0.03
SMPD4P2-201ENST00000440167 EXOSC9Q06265 439 aaKnown RBP14.89□□□□□ -0.03
SMPD4P2-201ENST00000440167 GAS2L2Q8NHY3 880 aa14.89□□□□□ -0.03
SMPD4P2-201ENST00000440167 PRDM11Q9NQV5 511 aa14.89□□□□□ -0.03
SMPD4P2-201ENST00000440167 BCAR3O75815 825 aa14.88□□□□□ -0.03
SMPD4P2-201ENST00000440167 CSB-PGBD3P0DP91 1061 aa14.88□□□□□ -0.03
SMPD4P2-201ENST00000440167 CALD1Q05682 793 aaKnown RBP14.88□□□□□ -0.03
SMPD4P2-201ENST00000440167 TOM1O60784 492 aa14.87□□□□□ -0.03
SMPD4P2-201ENST00000440167 IFT57Q9NWB7 429 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms