RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 MYT1Q01538 1121 aa10.65□□□□□ -0.7
COPS3-203ENST00000439936 SAFB2Q14151 953 aaKnown RBP eCLIP10.65□□□□□ -0.7
COPS3-203ENST00000439936 PTCH1Q13635 1447 aa10.65□□□□□ -0.7
COPS3-203ENST00000439936 FAM135BQ49AJ0 1406 aa10.64□□□□□ -0.71
COPS3-203ENST00000439936 KNDC1Q76NI1 1749 aa10.64□□□□□ -0.71
COPS3-203ENST00000439936 ADGRL3Q9HAR2 1447 aa10.64□□□□□ -0.71
COPS3-203ENST00000439936 TRPM1Q7Z4N2 1603 aa10.63□□□□□ -0.71
COPS3-203ENST00000439936 C2orf72A6NCS6 295 aa10.63□□□□□ -0.71
COPS3-203ENST00000439936 NALCNQ8IZF0 1738 aa10.62□□□□□ -0.71
COPS3-203ENST00000439936 DLC1Q96QB1 1528 aa10.62□□□□□ -0.71
COPS3-203ENST00000439936 HAP1P54257 671 aaPredicted RBP10.62□□□□□ -0.71
COPS3-203ENST00000439936 ROCK2O75116 1388 aaKnown RBP10.61□□□□□ -0.71
COPS3-203ENST00000439936 MINK1Q8N4C8 1332 aaPredicted RBP10.61□□□□□ -0.71
COPS3-203ENST00000439936 NUTM2FA1L443 756 aa10.61□□□□□ -0.71
COPS3-203ENST00000439936 HSPA1LP34931 641 aa10.61□□□□□ -0.71
COPS3-203ENST00000439936 HIRIP3Q9BW71 556 aaPredicted RBP10.61□□□□□ -0.71
COPS3-203ENST00000439936 CARD11Q9BXL7 1154 aa10.61□□□□□ -0.71
COPS3-203ENST00000439936 DCCP43146 1447 aa10.6□□□□□ -0.71
COPS3-203ENST00000439936 ZNF316A6NFI3 1004 aaPredicted RBP10.6□□□□□ -0.71
COPS3-203ENST00000439936 ARSIQ5FYB1 569 aa10.6□□□□□ -0.71
COPS3-203ENST00000439936 ORAI2Q96SN7 254 aa10.6□□□□□ -0.71
COPS3-203ENST00000439936 MST1RQ04912 1400 aa10.59□□□□□ -0.71
COPS3-203ENST00000439936 BRINP3Q76B58 766 aa10.59□□□□□ -0.71
COPS3-203ENST00000439936 KHSRPQ92945 711 aaKnown RBP eCLIP10.59□□□□□ -0.713e-8■■■■■ 29
COPS3-203ENST00000439936 TSHZ2Q9NRE2 1034 aa10.59□□□□□ -0.71
COPS3-203ENST00000439936 ARHGEF28Q8N1W1 1705 aaKnown RBP10.59□□□□□ -0.71
COPS3-203ENST00000439936 GPRASP1Q5JY77 1395 aa10.58□□□□□ -0.72
COPS3-203ENST00000439936 CENPJQ9HC77 1338 aaPredicted RBP10.58□□□□□ -0.72
COPS3-203ENST00000439936 C1orf167Q5SNV9 1468 aa10.58□□□□□ -0.72
COPS3-203ENST00000439936 WASLO00401 505 aaPredicted RBP10.58□□□□□ -0.72
COPS3-203ENST00000439936 RYDENQ9NUL5 291 aaKnown RBP10.58□□□□□ -0.72
COPS3-203ENST00000439936 RGPD8O14715 1765 aaPredicted RBP10.58□□□□□ -0.72
COPS3-203ENST00000439936 ROBO1Q9Y6N7 1651 aa10.57□□□□□ -0.72
COPS3-203ENST00000439936 ESCO1Q5FWF5 840 aa10.57□□□□□ -0.72
COPS3-203ENST00000439936 ANKRD13DQ6ZTN6 518 aa10.57□□□□□ -0.72
COPS3-203ENST00000439936 CDK19Q9BWU1 502 aa10.57□□□□□ -0.72
COPS3-203ENST00000439936 RALGAPBQ86X10 1494 aa10.56□□□□□ -0.72
COPS3-203ENST00000439936 PBX2P40425 430 aa10.56□□□□□ -0.72
COPS3-203ENST00000439936 DDX17Q92841 729 aaKnown RBP10.56□□□□□ -0.72
COPS3-203ENST00000439936 CDC42BPGQ6DT37 1551 aa10.55□□□□□ -0.72
COPS3-203ENST00000439936 LSM11P83369 360 aaKnown RBP eCLIP10.55□□□□□ -0.72
COPS3-203ENST00000439936 FMN2Q9NZ56 1722 aa10.55□□□□□ -0.72
COPS3-203ENST00000439936 NUDT16Q96DE0 195 aaKnown RBP10.54□□□□□ -0.72
COPS3-203ENST00000439936 PRR36Q9H6K5 1346 aa10.54□□□□□ -0.72
COPS3-203ENST00000439936 ST20-MTHFSA0A0A6YYL1 179 aa10.53□□□□□ -0.72
COPS3-203ENST00000439936 FOXO3O43524 673 aa10.53□□□□□ -0.72
COPS3-203ENST00000439936 PMFBP1Q8TBY8 1022 aa10.53□□□□□ -0.72
COPS3-203ENST00000439936 ADGRB2O60241 1585 aa10.52□□□□□ -0.72
COPS3-203ENST00000439936 PHLPP1O60346 1717 aa10.52□□□□□ -0.73
COPS3-203ENST00000439936 QRICH2Q9H0J4 1663 aa10.52□□□□□ -0.73
COPS3-203ENST00000439936 EIF3AQ14152 1382 aaKnown RBP10.52□□□□□ -0.73
COPS3-203ENST00000439936 SRPK2P78362 688 aaKnown RBP10.52□□□□□ -0.73
COPS3-203ENST00000439936 EVC2Q86UK5 1308 aa10.51□□□□□ -0.73
COPS3-203ENST00000439936 XPCQ01831 940 aaPredicted RBP10.51□□□□□ -0.73
COPS3-203ENST00000439936 KRT28Q7Z3Y7 464 aa10.51□□□□□ -0.73
COPS3-203ENST00000439936 LRRC59Q96AG4 307 aaKnown RBP10.51□□□□□ -0.73
COPS3-203ENST00000439936 TESK2Q96S53 571 aa10.51□□□□□ -0.73
COPS3-203ENST00000439936 USP32Q8NFA0 1604 aa10.51□□□□□ -0.73
COPS3-203ENST00000439936 ANKARQ7Z5J8 1434 aa10.5□□□□□ -0.73
COPS3-203ENST00000439936 SOS2Q07890 1332 aaPredicted RBP10.5□□□□□ -0.73
COPS3-203ENST00000439936 PSME1Q06323 249 aa10.5□□□□□ -0.73
COPS3-203ENST00000439936 NPHP3Q7Z494 1330 aa10.49□□□□□ -0.73
COPS3-203ENST00000439936 NHSL1Q5SYE7 1610 aa10.49□□□□□ -0.73
COPS3-203ENST00000439936 AHDC1Q5TGY3 1603 aaPredicted RBP10.49□□□□□ -0.73
COPS3-203ENST00000439936 TULP4Q9NRJ4 1543 aa10.49□□□□□ -0.73
COPS3-203ENST00000439936 PLEKHG3A1L390 1219 aa10.49□□□□□ -0.73
COPS3-203ENST00000439936 SLC34A2O95436 690 aa10.49□□□□□ -0.73
COPS3-203ENST00000439936 VSIG10Q8N0Z9 540 aa10.49□□□□□ -0.73
COPS3-203ENST00000439936 NGDNQ8NEJ9 315 aaKnown RBP10.49□□□□□ -0.73
COPS3-203ENST00000439936 TMC2Q8TDI7 906 aa10.49□□□□□ -0.73
COPS3-203ENST00000439936 USP47Q96K76 1375 aa10.48□□□□□ -0.73
COPS3-203ENST00000439936 CABP1Q9NZU7 370 aa10.48□□□□□ -0.73
COPS3-203ENST00000439936 COL16A1Q07092 1604 aaPredicted RBP10.48□□□□□ -0.73
COPS3-203ENST00000439936 SBNO2Q9Y2G9 1366 aa10.47□□□□□ -0.73
COPS3-203ENST00000439936 HSPA5P11021 654 aaKnown RBP10.47□□□□□ -0.73
COPS3-203ENST00000439936 EIF4G2P78344 907 aaKnown RBP eCLIP10.47□□□□□ -0.73
COPS3-203ENST00000439936 ACEP12821 1306 aa10.47□□□□□ -0.73
COPS3-203ENST00000439936 JCADQ9P266 1359 aa10.46□□□□□ -0.73
COPS3-203ENST00000439936 ATP7BP35670 1465 aa10.46□□□□□ -0.73
COPS3-203ENST00000439936 PUS7Q96PZ0 661 aaKnown RBP10.46□□□□□ -0.74
COPS3-203ENST00000439936 KIF1AQ12756 1690 aa10.45□□□□□ -0.74
COPS3-203ENST00000439936 PXDNQ92626 1479 aa10.45□□□□□ -0.74
COPS3-203ENST00000439936 PSDA5PKW4 1024 aaPredicted RBP10.45□□□□□ -0.74
COPS3-203ENST00000439936 SPATA31A3Q5VYP0 1347 aa10.45□□□□□ -0.74
COPS3-203ENST00000439936 NUTM2BA6NNL0 878 aaPredicted RBP10.44□□□□□ -0.74
COPS3-203ENST00000439936 NUTM2EB1AL46 878 aaPredicted RBP10.44□□□□□ -0.74
COPS3-203ENST00000439936 NUDT7P0C024 238 aa10.44□□□□□ -0.74
COPS3-203ENST00000439936 TMF1P82094 1093 aa10.44□□□□□ -0.74
COPS3-203ENST00000439936 NUTM2AQ8IVF1 878 aaPredicted RBP10.44□□□□□ -0.74
COPS3-203ENST00000439936 SLC12A5Q9H2X9 1139 aa10.44□□□□□ -0.74
COPS3-203ENST00000439936 HCSTQ9UBK5 93 aa10.44□□□□□ -0.74
COPS3-203ENST00000439936 PCDHGA4Q9Y5G9 962 aa10.44□□□□□ -0.74
COPS3-203ENST00000439936 ITSN1Q15811 1721 aa10.44□□□□□ -0.74
COPS3-203ENST00000439936 PPIP5K1Q6PFW1 1433 aa10.44□□□□□ -0.74
COPS3-203ENST00000439936 LMOD2Q6P5Q4 547 aa10.43□□□□□ -0.74
COPS3-203ENST00000439936 POLR3AO14802 1390 aaPredicted RBP10.43□□□□□ -0.74
COPS3-203ENST00000439936 PNPLA6Q8IY17 1366 aa10.43□□□□□ -0.74
COPS3-203ENST00000439936 DSG2Q14126 1118 aa10.42□□□□□ -0.74
COPS3-203ENST00000439936 TMC1Q8TDI8 760 aa10.42□□□□□ -0.74
COPS3-203ENST00000439936 GPHNQ9NQX3 736 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 1249.1 ms