RNA–Protein interactions for RNA: ENST00000439260.5

SLC13A1-203, Transcript of solute carrier family 13 member 1, humanhuman

TSL 1 (best)

Gene SLC13A1, Length 2,457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A1-203ENST00000439260 NME9Q86XW9 330 aa9.7□□□□□ -0.86
SLC13A1-203ENST00000439260 EMILIN1Q9Y6C2 1016 aa9.7□□□□□ -0.86
SLC13A1-203ENST00000439260 RRS1Q15050 365 aaKnown RBP9.69□□□□□ -0.86
SLC13A1-203ENST00000439260 GTPBP4Q9BZE4 634 aaKnown RBP9.69□□□□□ -0.86
SLC13A1-203ENST00000439260 MYH16Q9H6N6 1097 aa9.69□□□□□ -0.86
SLC13A1-203ENST00000439260 HDGFP51858 240 aaKnown RBP9.68□□□□□ -0.86
SLC13A1-203ENST00000439260 TRIM44Q96DX7 344 aaPredicted RBP9.68□□□□□ -0.86
SLC13A1-203ENST00000439260 CFAP53Q96M91 514 aa9.68□□□□□ -0.86
SLC13A1-203ENST00000439260 ISY1Q9ULR0 285 aaKnown RBP9.68□□□□□ -0.86
SLC13A1-203ENST00000439260 TRIM35Q9UPQ4 493 aa9.68□□□□□ -0.86
SLC13A1-203ENST00000439260 PCDHB15Q9Y5E8 787 aa9.68□□□□□ -0.86
SLC13A1-203ENST00000439260 NWD1Q149M9 1564 aa9.68□□□□□ -0.86
SLC13A1-203ENST00000439260 ABCC11Q96J66 1382 aa9.68□□□□□ -0.86
SLC13A1-203ENST00000439260 EXOSC9Q06265 439 aaKnown RBP9.68□□□□□ -0.86
SLC13A1-203ENST00000439260 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.68□□□□□ -0.86
SLC13A1-203ENST00000439260 LTBP4Q8N2S1 1624 aa9.68□□□□□ -0.86
SLC13A1-203ENST00000439260 RIMS2Q9UQ26 1411 aa9.67□□□□□ -0.86
SLC13A1-203ENST00000439260 OFD1O75665 1012 aa9.67□□□□□ -0.86
SLC13A1-203ENST00000439260 LETM1O95202 739 aaPredicted RBP9.67□□□□□ -0.86
SLC13A1-203ENST00000439260 SEC24BO95487 1268 aa9.67□□□□□ -0.86
SLC13A1-203ENST00000439260 C8orf34Q49A92 452 aa9.67□□□□□ -0.86
SLC13A1-203ENST00000439260 PHACTR3Q96KR7 559 aa9.67□□□□□ -0.86
SLC13A1-203ENST00000439260 PLEKHF1Q96S99 279 aa9.67□□□□□ -0.86
SLC13A1-203ENST00000439260 PANK2Q9BZ23 570 aa9.67□□□□□ -0.86
SLC13A1-203ENST00000439260 ERBB4Q15303 1308 aa9.67□□□□□ -0.86
SLC13A1-203ENST00000439260 ELL2O00472 640 aaPredicted RBP9.67□□□□□ -0.86
SLC13A1-203ENST00000439260 CENPQQ7L2Z9 268 aaPredicted RBP9.67□□□□□ -0.86
SLC13A1-203ENST00000439260 PLCD3Q8N3E9 789 aa9.67□□□□□ -0.86
SLC13A1-203ENST00000439260 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.67□□□□□ -0.86
SLC13A1-203ENST00000439260 SECISBP2LQ93073 1101 aaKnown RBP9.67□□□□□ -0.86
SLC13A1-203ENST00000439260 BCCIPQ9P287 314 aaKnown RBP eCLIP9.67□□□□□ -0.86
SLC13A1-203ENST00000439260 ZFYVE9O95405 1425 aa9.67□□□□□ -0.86
SLC13A1-203ENST00000439260 TMPOP42166 694 aaKnown RBP9.66□□□□□ -0.86
SLC13A1-203ENST00000439260 FAM13BQ9NYF5 915 aa9.66□□□□□ -0.86
SLC13A1-203ENST00000439260 ZSCAN20P17040 1043 aaPredicted RBP9.66□□□□□ -0.86
SLC13A1-203ENST00000439260 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.66□□□□□ -0.86
SLC13A1-203ENST00000439260 TERF2IPQ9NYB0 399 aa9.66□□□□□ -0.86
SLC13A1-203ENST00000439260 PIK3R4Q99570 1358 aa9.65□□□□□ -0.86
SLC13A1-203ENST00000439260 SLC26A8Q96RN1 970 aa9.65□□□□□ -0.86
SLC13A1-203ENST00000439260 POLKQ9UBT6 870 aa9.65□□□□□ -0.86
SLC13A1-203ENST00000439260 NPHP4O75161 1426 aaPredicted RBP9.65□□□□□ -0.86
SLC13A1-203ENST00000439260 COL3A1P02461 1466 aaPredicted RBP9.65□□□□□ -0.86
SLC13A1-203ENST00000439260 FAM83GA6ND36 823 aa9.65□□□□□ -0.86
SLC13A1-203ENST00000439260 CDK11BP21127 795 aaKnown RBP9.65□□□□□ -0.86
SLC13A1-203ENST00000439260 PRKAR2BP31323 418 aa9.65□□□□□ -0.86
SLC13A1-203ENST00000439260 ANKLE2Q86XL3 938 aa9.65□□□□□ -0.86
SLC13A1-203ENST00000439260 HOMEZQ8IX15 550 aa9.65□□□□□ -0.86
SLC13A1-203ENST00000439260 USP32Q8NFA0 1604 aa9.65□□□□□ -0.86
SLC13A1-203ENST00000439260 NCOA3Q9Y6Q9 1424 aa9.65□□□□□ -0.87
SLC13A1-203ENST00000439260 CHD2O14647 1828 aaKnown RBP9.65□□□□□ -0.87
SLC13A1-203ENST00000439260 TMEM2Q9UHN6 1383 aa9.64□□□□□ -0.87
SLC13A1-203ENST00000439260 DCTN1Q14203 1278 aa9.64□□□□□ -0.87
SLC13A1-203ENST00000439260 HDGFL2Q7Z4V5 671 aaPredicted RBP9.64□□□□□ -0.87
SLC13A1-203ENST00000439260 PRDM10Q9NQV6 1147 aa9.64□□□□□ -0.87
SLC13A1-203ENST00000439260 MAP2P11137 1827 aaKnown RBP9.64□□□□□ -0.87
SLC13A1-203ENST00000439260 VGLL3A8MV65 326 aa9.64□□□□□ -0.87
SLC13A1-203ENST00000439260 DIAPH1O60610 1272 aaKnown RBP9.64□□□□□ -0.87
SLC13A1-203ENST00000439260 SSH1Q8WYL5 1049 aa9.64□□□□□ -0.87
SLC13A1-203ENST00000439260 LTKP29376 864 aa9.63□□□□□ -0.87
SLC13A1-203ENST00000439260 RBM33Q96EV2 1170 aaKnown RBP9.63□□□□□ -0.87
SLC13A1-203ENST00000439260 CCDC94Q9BW85 323 aaPredicted RBP9.63□□□□□ -0.87
SLC13A1-203ENST00000439260 SMC4Q9NTJ3 1288 aa9.63□□□□□ -0.87
SLC13A1-203ENST00000439260 NRXN3Q9Y4C0 1643 aa9.63□□□□□ -0.87
SLC13A1-203ENST00000439260 PRR36Q9H6K5 1346 aa9.63□□□□□ -0.87
SLC13A1-203ENST00000439260 MAPK8IP3Q9UPT6 1336 aa9.63□□□□□ -0.87
SLC13A1-203ENST00000439260 PLEKHG1Q9ULL1 1385 aa9.63□□□□□ -0.87
SLC13A1-203ENST00000439260 SETD1AO15047 1707 aaKnown RBP9.63□□□□□ -0.87
SLC13A1-203ENST00000439260 ATAD2Q6PL18 1390 aa9.63□□□□□ -0.87
SLC13A1-203ENST00000439260 PPIP5K1Q6PFW1 1433 aa9.62□□□□□ -0.87
SLC13A1-203ENST00000439260 DYNC1I1O14576 645 aa9.62□□□□□ -0.87
SLC13A1-203ENST00000439260 IRX3P78415 501 aaPredicted RBP9.62□□□□□ -0.87
SLC13A1-203ENST00000439260 NUDT16Q96DE0 195 aaKnown RBP9.62□□□□□ -0.87
SLC13A1-203ENST00000439260 WASLO00401 505 aaPredicted RBP9.62□□□□□ -0.87
SLC13A1-203ENST00000439260 TRIM27P14373 513 aa9.62□□□□□ -0.87
SLC13A1-203ENST00000439260 FAM161AQ3B820 660 aa9.62□□□□□ -0.87
SLC13A1-203ENST00000439260 AEBP1Q8IUX7 1158 aa9.62□□□□□ -0.87
SLC13A1-203ENST00000439260 WDR63Q8IWG1 891 aa9.62□□□□□ -0.87
SLC13A1-203ENST00000439260 TSPYL6Q8N831 410 aa9.62□□□□□ -0.87
SLC13A1-203ENST00000439260 NOB1Q9ULX3 412 aaKnown RBP9.62□□□□□ -0.87
SLC13A1-203ENST00000439260 LRRC7Q96NW7 1537 aa9.61□□□□□ -0.87
SLC13A1-203ENST00000439260 SAMD1Q6SPF0 538 aaPredicted RBP9.61□□□□□ -0.87
SLC13A1-203ENST00000439260 GRPEL1Q9HAV7 217 aa9.61□□□□□ -0.87
SLC13A1-203ENST00000439260 KIF20BQ96Q89 1820 aa9.61□□□□□ -0.87
SLC13A1-203ENST00000439260 RGS22Q8NE09 1264 aa9.61□□□□□ -0.87
SLC13A1-203ENST00000439260 PMFBP1Q8TBY8 1022 aa9.61□□□□□ -0.87
SLC13A1-203ENST00000439260 C1orf115Q9H7X2 142 aa9.61□□□□□ -0.87
SLC13A1-203ENST00000439260 EID1Q9Y6B2 187 aa9.61□□□□□ -0.87
SLC13A1-203ENST00000439260 ROBO2Q9HCK4 1378 aa9.61□□□□□ -0.87
SLC13A1-203ENST00000439260 ADGRB2O60241 1585 aa9.6□□□□□ -0.87
SLC13A1-203ENST00000439260 PDE3AQ14432 1141 aa9.6□□□□□ -0.87
SLC13A1-203ENST00000439260 BECN1Q14457 450 aa9.6□□□□□ -0.87
SLC13A1-203ENST00000439260 KRT24Q2M2I5 525 aa9.6□□□□□ -0.87
SLC13A1-203ENST00000439260 DNTTIP2Q5QJE6 756 aaKnown RBP9.6□□□□□ -0.87
SLC13A1-203ENST00000439260 ITPRIPQ8IWB1 547 aa9.6□□□□□ -0.87
SLC13A1-203ENST00000439260 KNDC1Q76NI1 1749 aa9.6□□□□□ -0.87
SLC13A1-203ENST00000439260 RNF216Q9NWF9 866 aaPredicted RBP9.6□□□□□ -0.87
SLC13A1-203ENST00000439260 PDZRN3Q9UPQ7 1066 aa9.6□□□□□ -0.87
SLC13A1-203ENST00000439260 NSD2O96028 1365 aa9.6□□□□□ -0.87
SLC13A1-203ENST00000439260 ZSCAN30Q86W11 494 aa9.59□□□□□ -0.87
SLC13A1-203ENST00000439260 ANKRD26Q9UPS8 1709 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms