RNA–Protein interactions for RNA: ENST00000438763.6

HLA-DOB-206, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DOB, Length 1,372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-206ENST00000438763 KCNH5Q8NCM2 988 aa16.43■□□□□ 0.22
HLA-DOB-206ENST00000438763 TRPM3Q9HCF6 1732 aaPredicted RBP16.43■□□□□ 0.22
HLA-DOB-206ENST00000438763 ATRNO75882 1429 aa16.43■□□□□ 0.22
HLA-DOB-206ENST00000438763 KIF24Q5T7B8 1368 aa16.41■□□□□ 0.22
HLA-DOB-206ENST00000438763 CCDC125Q86Z20 511 aa16.41■□□□□ 0.22
HLA-DOB-206ENST00000438763 MAP3K19Q56UN5 1328 aa16.41■□□□□ 0.22
HLA-DOB-206ENST00000438763 MARF1Q9Y4F3 1742 aaKnown RBP16.41■□□□□ 0.22
HLA-DOB-206ENST00000438763 SOX12O15370 315 aa16.4■□□□□ 0.22
HLA-DOB-206ENST00000438763 U2AF1L5P0DN76 240 aaPredicted RBP16.4■□□□□ 0.22
HLA-DOB-206ENST00000438763 IL13P35225 146 aa16.4■□□□□ 0.22
HLA-DOB-206ENST00000438763 U2AF1Q01081 240 aaKnown RBP eCLIP16.4■□□□□ 0.22
HLA-DOB-206ENST00000438763 LMOD2Q6P5Q4 547 aa16.4■□□□□ 0.22
HLA-DOB-206ENST00000438763 FNBP4Q8N3X1 1017 aaPredicted RBP16.4■□□□□ 0.22
HLA-DOB-206ENST00000438763 USP19O94966 1318 aa16.4■□□□□ 0.22
HLA-DOB-206ENST00000438763 SOS2Q07890 1332 aaPredicted RBP16.4■□□□□ 0.22
HLA-DOB-206ENST00000438763 PXDNQ92626 1479 aa16.4■□□□□ 0.22
HLA-DOB-206ENST00000438763 U2SURPO15042 1029 aaKnown RBP16.39■□□□□ 0.21
HLA-DOB-206ENST00000438763 DEFB132Q7Z7B7 95 aa16.39■□□□□ 0.21
HLA-DOB-206ENST00000438763 SPATA31A3Q5VYP0 1347 aa16.39■□□□□ 0.21
HLA-DOB-206ENST00000438763 RUNDC1Q96C34 613 aa16.38■□□□□ 0.21
HLA-DOB-206ENST00000438763 PNNQ9H307 717 aaKnown RBP16.38■□□□□ 0.21
HLA-DOB-206ENST00000438763 FLT4P35916 1363 aa16.38■□□□□ 0.21
HLA-DOB-206ENST00000438763 TNS3Q68CZ2 1445 aa16.38■□□□□ 0.21
HLA-DOB-206ENST00000438763 GCP02774 474 aa16.38■□□□□ 0.21
HLA-DOB-206ENST00000438763 AMPHP49418 695 aa16.38■□□□□ 0.21
HLA-DOB-206ENST00000438763 NGEFQ8N5V2 710 aa16.38■□□□□ 0.21
HLA-DOB-206ENST00000438763 ALS2Q96Q42 1657 aa16.38■□□□□ 0.21
HLA-DOB-206ENST00000438763 SLIT3O75094 1523 aa16.37■□□□□ 0.21
HLA-DOB-206ENST00000438763 HSP90AB2PQ58FF8 381 aa16.37■□□□□ 0.21
HLA-DOB-206ENST00000438763 CCDC146Q8IYE0 955 aa16.37■□□□□ 0.21
HLA-DOB-206ENST00000438763 ARHGEF10O15013 1369 aa16.36■□□□□ 0.21
HLA-DOB-206ENST00000438763 LRP5O75197 1615 aa16.36■□□□□ 0.21
HLA-DOB-206ENST00000438763 FCHSD2O94868 740 aa16.36■□□□□ 0.21
HLA-DOB-206ENST00000438763 EIF4A2Q14240 407 aaKnown RBP16.36■□□□□ 0.21
HLA-DOB-206ENST00000438763 NFAT5O94916 1531 aa16.35■□□□□ 0.21
HLA-DOB-206ENST00000438763 APAF1O14727 1248 aa16.35■□□□□ 0.21
HLA-DOB-206ENST00000438763 HOXC9P31274 260 aa16.35■□□□□ 0.21
HLA-DOB-206ENST00000438763 NCBP3Q53F19 620 aaKnown RBP16.35■□□□□ 0.21
HLA-DOB-206ENST00000438763 PEAK1Q9H792 1746 aa16.35■□□□□ 0.21
HLA-DOB-206ENST00000438763 RTL1A6NKG5 1358 aa16.35■□□□□ 0.21
HLA-DOB-206ENST00000438763 BCL9LQ86UU0 1499 aa16.34■□□□□ 0.21
HLA-DOB-206ENST00000438763 PDE3BQ13370 1112 aa16.34■□□□□ 0.21
HLA-DOB-206ENST00000438763 ARHGEF25Q86VW2 580 aa16.34■□□□□ 0.21
HLA-DOB-206ENST00000438763 IP6K1Q92551 441 aa16.34■□□□□ 0.21
HLA-DOB-206ENST00000438763 PLEKHF1Q96S99 279 aa16.34■□□□□ 0.21
HLA-DOB-206ENST00000438763 SENP3-EIF4A1A0A087X0R7 540 aa16.33■□□□□ 0.2
HLA-DOB-206ENST00000438763 PSDA5PKW4 1024 aaPredicted RBP16.33■□□□□ 0.2
HLA-DOB-206ENST00000438763 SALL2Q9Y467 1007 aaPredicted RBP16.33■□□□□ 0.2
HLA-DOB-206ENST00000438763 TCP11L2Q8N4U5 519 aa16.32■□□□□ 0.2
HLA-DOB-206ENST00000438763 GJD4Q96KN9 370 aaPredicted RBP16.32■□□□□ 0.2
HLA-DOB-206ENST00000438763 RSPH6AQ9H0K4 717 aa16.32■□□□□ 0.2
HLA-DOB-206ENST00000438763 PHRF1Q9P1Y6 1649 aaKnown RBP16.3■□□□□ 0.2
HLA-DOB-206ENST00000438763 MAPK8IP3Q9UPT6 1336 aa16.29■□□□□ 0.2
HLA-DOB-206ENST00000438763 NEFMP07197 916 aa16.29■□□□□ 0.2
HLA-DOB-206ENST00000438763 COL22A1Q8NFW1 1626 aaPredicted RBP16.29■□□□□ 0.2
HLA-DOB-206ENST00000438763 ZNF521Q96K83 1311 aa16.28■□□□□ 0.2
HLA-DOB-206ENST00000438763 PLEKHG5O94827 1062 aa16.28■□□□□ 0.2
HLA-DOB-206ENST00000438763 HMOX1P09601 288 aa16.28■□□□□ 0.2
HLA-DOB-206ENST00000438763 PRKAR2BP31323 418 aa16.28■□□□□ 0.2
HLA-DOB-206ENST00000438763 CCDC27Q2M243 656 aa16.28■□□□□ 0.2
HLA-DOB-206ENST00000438763 GLI3P10071 1580 aa16.27■□□□□ 0.2
HLA-DOB-206ENST00000438763 SF3B2Q13435 895 aaKnown RBP16.27■□□□□ 0.2
HLA-DOB-206ENST00000438763 SULT6B1Q6IMI4 303 aa16.27■□□□□ 0.2
HLA-DOB-206ENST00000438763 CABLES1Q8TDN4 633 aa16.27■□□□□ 0.2
HLA-DOB-206ENST00000438763 BRWD3Q6RI45 1802 aa16.27■□□□□ 0.2
HLA-DOB-206ENST00000438763 LTN1O94822 1766 aa16.27■□□□□ 0.2
HLA-DOB-206ENST00000438763 IGSF1Q8N6C5 1336 aa16.27■□□□□ 0.19
HLA-DOB-206ENST00000438763 ZBTB7CA1YPR0 619 aa16.26■□□□□ 0.19
HLA-DOB-206ENST00000438763 TMPOP42166 694 aaKnown RBP16.26■□□□□ 0.19
HLA-DOB-206ENST00000438763 ZC3H6P61129 1189 aaKnown RBP16.26■□□□□ 0.19
HLA-DOB-206ENST00000438763 EYA1Q99502 592 aa16.26■□□□□ 0.19
HLA-DOB-206ENST00000438763 CPDO75976 1380 aa16.25■□□□□ 0.19
HLA-DOB-206ENST00000438763 RGPD1P0DJD0 1748 aa16.25■□□□□ 0.19
HLA-DOB-206ENST00000438763 GOLGA2Q08379 1002 aa16.25■□□□□ 0.19
HLA-DOB-206ENST00000438763 WWC1Q8IX03 1113 aa16.25■□□□□ 0.19
HLA-DOB-206ENST00000438763 KDRP35968 1356 aa16.24■□□□□ 0.19
HLA-DOB-206ENST00000438763 NEUROD2Q15784 382 aa16.24■□□□□ 0.19
HLA-DOB-206ENST00000438763 AEBP1Q8IUX7 1158 aa16.24■□□□□ 0.19
HLA-DOB-206ENST00000438763 LTV1Q96GA3 475 aaPredicted RBP16.24■□□□□ 0.19
HLA-DOB-206ENST00000438763 PHACTR3Q96KR7 559 aa16.24■□□□□ 0.19
HLA-DOB-206ENST00000438763 RRP7AQ9Y3A4 280 aaKnown RBP16.24■□□□□ 0.19
HLA-DOB-206ENST00000438763 CRYBG1Q9Y4K1 1723 aa16.24■□□□□ 0.19
HLA-DOB-206ENST00000438763 NFE2L2Q16236 605 aa16.23■□□□□ 0.19
HLA-DOB-206ENST00000438763 WDR63Q8IWG1 891 aa16.23■□□□□ 0.19
HLA-DOB-206ENST00000438763 CDCA7LQ96GN5 454 aa16.23■□□□□ 0.19
HLA-DOB-206ENST00000438763 AXIN2Q9Y2T1 843 aa16.23■□□□□ 0.19
HLA-DOB-206ENST00000438763 ABCC6O95255 1503 aa16.22■□□□□ 0.19
HLA-DOB-206ENST00000438763 HAP1P54257 671 aaPredicted RBP16.22■□□□□ 0.19
HLA-DOB-206ENST00000438763 RIPK4P57078 832 aa16.22■□□□□ 0.19
HLA-DOB-206ENST00000438763 UNC5CLQ8IV45 518 aa16.22■□□□□ 0.19
HLA-DOB-206ENST00000438763 SEPT12Q8IYM1 358 aa16.22■□□□□ 0.19
HLA-DOB-206ENST00000438763 ANKRD24Q8TF21 1146 aa16.22■□□□□ 0.19
HLA-DOB-206ENST00000438763 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.21■□□□□ 0.19
HLA-DOB-206ENST00000438763 SLFN5Q08AF3 891 aa16.21■□□□□ 0.19
HLA-DOB-206ENST00000438763 KIAA0232Q92628 1395 aa16.21■□□□□ 0.19
HLA-DOB-206ENST00000438763 NBPF6Q5VWK0 638 aa16.2■□□□□ 0.18
HLA-DOB-206ENST00000438763 TRMT2AQ8IZ69 625 aaKnown RBP16.2■□□□□ 0.18
HLA-DOB-206ENST00000438763 NBPF4Q96M43 638 aa16.2■□□□□ 0.18
HLA-DOB-206ENST00000438763 TRIM35Q9UPQ4 493 aa16.2■□□□□ 0.18
HLA-DOB-206ENST00000438763 E9PSI1 815 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms