RNA–Protein interactions for RNA: ENST00000438610.5

MTA1-208, Transcript of metastasis associated 1, humanhuman

TSL 1 (best)

Gene MTA1, Length 2,144 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-208ENST00000438610 ALS2Q96Q42 1657 aa24.38■■□□□ 1.49
MTA1-208ENST00000438610 GCP02774 474 aa24.38■■□□□ 1.49
MTA1-208ENST00000438610 PXDNQ92626 1479 aa24.38■■□□□ 1.49
MTA1-208ENST00000438610 HOXC9P31274 260 aa24.37■■□□□ 1.49
MTA1-208ENST00000438610 WWC1Q8IX03 1113 aa24.37■■□□□ 1.49
MTA1-208ENST00000438610 NEFMP07197 916 aa24.37■■□□□ 1.49
MTA1-208ENST00000438610 LTBP4Q8N2S1 1624 aa24.36■■□□□ 1.49
MTA1-208ENST00000438610 PRKAR2BP31323 418 aa24.36■■□□□ 1.49
MTA1-208ENST00000438610 HMOX1P09601 288 aa24.35■■□□□ 1.49
MTA1-208ENST00000438610 TMPOP42166 694 aaKnown RBP24.35■■□□□ 1.49
MTA1-208ENST00000438610 IP6K1Q92551 441 aa24.35■■□□□ 1.49
MTA1-208ENST00000438610 RRP7AQ9Y3A4 280 aaKnown RBP24.35■■□□□ 1.49
MTA1-208ENST00000438610 SPATA31A3Q5VYP0 1347 aa24.35■■□□□ 1.49
MTA1-208ENST00000438610 SLFN5Q08AF3 891 aa24.34■■□□□ 1.49
MTA1-208ENST00000438610 NEUROD2Q15784 382 aa24.34■■□□□ 1.49
MTA1-208ENST00000438610 TNS3Q68CZ2 1445 aa24.34■■□□□ 1.49
MTA1-208ENST00000438610 WDR63Q8IWG1 891 aa24.34■■□□□ 1.49
MTA1-208ENST00000438610 TRMT2AQ8IZ69 625 aaKnown RBP24.33■■□□□ 1.49
MTA1-208ENST00000438610 ARHGEF10O15013 1369 aa24.32■■□□□ 1.48
MTA1-208ENST00000438610 SOS2Q07890 1332 aaPredicted RBP24.32■■□□□ 1.48
MTA1-208ENST00000438610 ARHGEF25Q86VW2 580 aa24.32■■□□□ 1.48
MTA1-208ENST00000438610 E9PSI1 815 aa24.31■■□□□ 1.48
MTA1-208ENST00000438610 PHRF1Q9P1Y6 1649 aaKnown RBP24.31■■□□□ 1.48
MTA1-208ENST00000438610 RGPD1P0DJD0 1748 aa24.31■■□□□ 1.48
MTA1-208ENST00000438610 SULT6B1Q6IMI4 303 aa24.31■■□□□ 1.48
MTA1-208ENST00000438610 DUSP27Q5VZP5 1158 aa24.3■■□□□ 1.48
MTA1-208ENST00000438610 LTN1O94822 1766 aa24.3■■□□□ 1.48
MTA1-208ENST00000438610 PHACTR3Q96KR7 559 aa24.29■■□□□ 1.48
MTA1-208ENST00000438610 RIPK4P57078 832 aa24.28■■□□□ 1.48
MTA1-208ENST00000438610 IGSF1Q8N6C5 1336 aa24.28■■□□□ 1.48
MTA1-208ENST00000438610 MED1Q15648 1581 aaPredicted RBP24.28■■□□□ 1.48
MTA1-208ENST00000438610 NFE2L2Q16236 605 aa24.28■■□□□ 1.48
MTA1-208ENST00000438610 EYA1Q99502 592 aa24.28■■□□□ 1.48
MTA1-208ENST00000438610 TRIM35Q9UPQ4 493 aa24.27■■□□□ 1.48
MTA1-208ENST00000438610 AEBP1Q8IUX7 1158 aa24.26■■□□□ 1.47
MTA1-208ENST00000438610 ERICH6BQ5W0A0 696 aa24.26■■□□□ 1.47
MTA1-208ENST00000438610 SPINK5Q9NQ38 1064 aaPredicted RBP24.26■■□□□ 1.47
MTA1-208ENST00000438610 KDRP35968 1356 aa24.26■■□□□ 1.47
MTA1-208ENST00000438610 RCAN3Q9UKA8 241 aa24.24■■□□□ 1.47
MTA1-208ENST00000438610 RNF123Q5XPI4 1314 aa24.24■■□□□ 1.47
MTA1-208ENST00000438610 NHSL1Q5SYE7 1610 aa24.23■■□□□ 1.47
MTA1-208ENST00000438610 PLEKHG5O94827 1062 aa24.22■■□□□ 1.47
MTA1-208ENST00000438610 IL16Q14005 1332 aa24.21■■□□□ 1.47
MTA1-208ENST00000438610 ZBTB7CA1YPR0 619 aa24.21■■□□□ 1.47
MTA1-208ENST00000438610 LTV1Q96GA3 475 aaPredicted RBP24.21■■□□□ 1.47
MTA1-208ENST00000438610 AEBP2Q6ZN18 517 aaPredicted RBP24.2■■□□□ 1.47
MTA1-208ENST00000438610 ZC3H6P61129 1189 aaKnown RBP24.2■■□□□ 1.46
MTA1-208ENST00000438610 LMOD3Q0VAK6 560 aa24.19■■□□□ 1.46
MTA1-208ENST00000438610 CABLES1Q8TDN4 633 aa24.19■■□□□ 1.46
MTA1-208ENST00000438610 MYH16Q9H6N6 1097 aa24.19■■□□□ 1.46
MTA1-208ENST00000438610 CPDO75976 1380 aa24.17■■□□□ 1.46
MTA1-208ENST00000438610 CRYBG1Q9Y4K1 1723 aa24.17■■□□□ 1.46
MTA1-208ENST00000438610 CALD1Q05682 793 aaKnown RBP24.16■■□□□ 1.46
MTA1-208ENST00000438610 AXIN2Q9Y2T1 843 aa24.16■■□□□ 1.46
MTA1-208ENST00000438610 NBPF6Q5VWK0 638 aa24.15■■□□□ 1.46
MTA1-208ENST00000438610 ANKRD24Q8TF21 1146 aa24.15■■□□□ 1.46
MTA1-208ENST00000438610 NBPF4Q96M43 638 aa24.15■■□□□ 1.46
MTA1-208ENST00000438610 ABCC6O95255 1503 aa24.14■■□□□ 1.46
MTA1-208ENST00000438610 ROBO1Q9Y6N7 1651 aa24.14■■□□□ 1.45
MTA1-208ENST00000438610 IRX6P78412 446 aaPredicted RBP24.13■■□□□ 1.45
MTA1-208ENST00000438610 LRRC59Q96AG4 307 aaKnown RBP24.13■■□□□ 1.45
MTA1-208ENST00000438610 TOM1O60784 492 aa24.12■■□□□ 1.45
MTA1-208ENST00000438610 GAS2L2Q8NHY3 880 aa24.12■■□□□ 1.45
MTA1-208ENST00000438610 AHDC1Q5TGY3 1603 aaPredicted RBP24.12■■□□□ 1.45
MTA1-208ENST00000438610 COL18A1P39060 1754 aa24.11■■□□□ 1.45
MTA1-208ENST00000438610 KIAA0232Q92628 1395 aa24.11■■□□□ 1.45
MTA1-208ENST00000438610 DLG5Q8TDM6 1919 aa24.11■■□□□ 1.45
MTA1-208ENST00000438610 NCAPD2Q15021 1401 aa24.1■■□□□ 1.45
MTA1-208ENST00000438610 MTHFSDQ2M296 383 aaKnown RBP24.1■■□□□ 1.45
MTA1-208ENST00000438610 ERBB3P21860 1342 aa24.1■■□□□ 1.45
MTA1-208ENST00000438610 RRP1P56182 461 aaKnown RBP24.1■■□□□ 1.45
MTA1-208ENST00000438610 PELP1Q8IZL8 1130 aaKnown RBP24.1■■□□□ 1.45
MTA1-208ENST00000438610 USHBP1Q8N6Y0 703 aa24.08■■□□□ 1.45
MTA1-208ENST00000438610 FANCIQ9NVI1 1328 aa24.08■■□□□ 1.44
MTA1-208ENST00000438610 HTATSF1O43719 755 aaKnown RBP24.07■■□□□ 1.44
MTA1-208ENST00000438610 HAP1P54257 671 aaPredicted RBP24.07■■□□□ 1.44
MTA1-208ENST00000438610 IFT57Q9NWB7 429 aa24.07■■□□□ 1.44
MTA1-208ENST00000438610 RGPD5Q99666 1765 aa24.06■■□□□ 1.44
MTA1-208ENST00000438610 CT47B1P0C2W7 299 aaPredicted RBP24.06■■□□□ 1.44
MTA1-208ENST00000438610 GNAI1P63096 354 aa24.06■■□□□ 1.44
MTA1-208ENST00000438610 CHRNA2Q15822 529 aa24.06■■□□□ 1.44
MTA1-208ENST00000438610 ZNF853P0CG23 659 aa24.05■■□□□ 1.44
MTA1-208ENST00000438610 PPP4R2Q9NY27 417 aa24.05■■□□□ 1.44
MTA1-208ENST00000438610 FAM83GA6ND36 823 aa24.05■■□□□ 1.44
MTA1-208ENST00000438610 THUMPD2Q9BTF0 503 aaKnown RBP24.05■■□□□ 1.44
MTA1-208ENST00000438610 PRDM11Q9NQV5 511 aa24.05■■□□□ 1.44
MTA1-208ENST00000438610 CAMTA1Q9Y6Y1 1673 aa24.05■■□□□ 1.44
MTA1-208ENST00000438610 RGPD2P0DJD1 1756 aa24.04■■□□□ 1.44
MTA1-208ENST00000438610 TSR2Q969E8 191 aaKnown RBP24.04■■□□□ 1.44
MTA1-208ENST00000438610 CFAP44Q96MT7 982 aa24.04■■□□□ 1.44
MTA1-208ENST00000438610 RTF1Q92541 710 aaKnown RBP24.03■■□□□ 1.44
MTA1-208ENST00000438610 ABCA3Q99758 1704 aa24.02■■□□□ 1.44
MTA1-208ENST00000438610 DCTN1Q14203 1278 aa24.02■■□□□ 1.44
MTA1-208ENST00000438610 LMO7Q8WWI1 1683 aa24.01■■□□□ 1.43
MTA1-208ENST00000438610 AMOTQ4VCS5 1084 aa24.01■■□□□ 1.43
MTA1-208ENST00000438610 GNAT3A8MTJ3 354 aa24.01■■□□□ 1.43
MTA1-208ENST00000438610 EXOSC9Q06265 439 aaKnown RBP24■■□□□ 1.43
MTA1-208ENST00000438610 PLEKHO1Q53GL0 409 aaPredicted RBP24■■□□□ 1.43
MTA1-208ENST00000438610 GOLGA6L2Q8N9W4 650 aaPredicted RBP24■■□□□ 1.43
MTA1-208ENST00000438610 NLRP2Q9NX02 1062 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms