RNA–Protein interactions for RNA: ENST00000438130.6

GTF2I-202, Transcript of general transcription factor IIi, humanhuman

TSL 4

Gene GTF2I, Length 836 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-202ENST00000438130 MINK1Q8N4C8 1332 aaPredicted RBP12.88□□□□□ -0.35
GTF2I-202ENST00000438130 KRT27Q7Z3Y8 459 aa12.88□□□□□ -0.35
GTF2I-202ENST00000438130 POLR3AO14802 1390 aaPredicted RBP12.88□□□□□ -0.35
GTF2I-202ENST00000438130 DISP2A7MBM2 1401 aa12.88□□□□□ -0.35
GTF2I-202ENST00000438130 NRKQ7Z2Y5 1582 aa12.87□□□□□ -0.35
GTF2I-202ENST00000438130 DEFB132Q7Z7B7 95 aa12.87□□□□□ -0.35
GTF2I-202ENST00000438130 DCAF11Q8TEB1 546 aa12.87□□□□□ -0.35
GTF2I-202ENST00000438130 FARP1Q9Y4F1 1045 aaPredicted RBP12.87□□□□□ -0.35
GTF2I-202ENST00000438130 SPATA31A5Q5VU36 1347 aa12.87□□□□□ -0.35
GTF2I-202ENST00000438130 SPATA31A7Q8IWB4 1347 aa12.87□□□□□ -0.35
GTF2I-202ENST00000438130 LMO7Q8WWI1 1683 aa12.86□□□□□ -0.35
GTF2I-202ENST00000438130 ZNF467Q7Z7K2 595 aaPredicted RBP12.86□□□□□ -0.35
GTF2I-202ENST00000438130 BTG4Q9NY30 223 aa12.86□□□□□ -0.35
GTF2I-202ENST00000438130 LMOD2Q6P5Q4 547 aa12.85□□□□□ -0.35
GTF2I-202ENST00000438130 FAM98CQ17RN3 349 aaKnown RBP12.83□□□□□ -0.36
GTF2I-202ENST00000438130 NUDT16Q96DE0 195 aaKnown RBP12.83□□□□□ -0.36
GTF2I-202ENST00000438130 KIAA0232Q92628 1395 aa12.82□□□□□ -0.36
GTF2I-202ENST00000438130 RREB1Q92766 1687 aa12.81□□□□□ -0.36
GTF2I-202ENST00000438130 CAMTA1Q9Y6Y1 1673 aa12.81□□□□□ -0.36
GTF2I-202ENST00000438130 PLEKHG3A1L390 1219 aa12.81□□□□□ -0.36
GTF2I-202ENST00000438130 NGDNQ8NEJ9 315 aaKnown RBP12.81□□□□□ -0.36
GTF2I-202ENST00000438130 CCDC9Q9Y3X0 531 aaKnown RBP12.81□□□□□ -0.36
GTF2I-202ENST00000438130 USP19O94966 1318 aa12.81□□□□□ -0.36
GTF2I-202ENST00000438130 SPATA31A1Q5TZJ5 1347 aa12.81□□□□□ -0.36
GTF2I-202ENST00000438130 CPDO75976 1380 aa12.81□□□□□ -0.36
GTF2I-202ENST00000438130 QRICH2Q9H0J4 1663 aa12.8□□□□□ -0.36
GTF2I-202ENST00000438130 SSH2Q76I76 1423 aa12.79□□□□□ -0.36
GTF2I-202ENST00000438130 PRKAR2AP13861 404 aaKnown RBP12.79□□□□□ -0.36
GTF2I-202ENST00000438130 SF3B2Q13435 895 aaKnown RBP12.79□□□□□ -0.36
GTF2I-202ENST00000438130 PDAP1Q13442 181 aaKnown RBP12.79□□□□□ -0.36
GTF2I-202ENST00000438130 CDK19Q9BWU1 502 aa12.79□□□□□ -0.36
GTF2I-202ENST00000438130 PRDM11Q9NQV5 511 aa12.79□□□□□ -0.36
GTF2I-202ENST00000438130 CCDC61Q9Y6R9 512 aa12.79□□□□□ -0.36
GTF2I-202ENST00000438130 PARP4Q9UKK3 1724 aaKnown RBP12.79□□□□□ -0.36
GTF2I-202ENST00000438130 BAG6P46379 1132 aa12.78□□□□□ -0.36
GTF2I-202ENST00000438130 NBPF8Q3BBV2 869 aa12.78□□□□□ -0.36
GTF2I-202ENST00000438130 ACEP12821 1306 aa12.78□□□□□ -0.36
GTF2I-202ENST00000438130 SLIT3O75094 1523 aa12.78□□□□□ -0.36
GTF2I-202ENST00000438130 NUP188Q5SRE5 1749 aa12.77□□□□□ -0.36
GTF2I-202ENST00000438130 PEAK1Q9H792 1746 aa12.77□□□□□ -0.36
GTF2I-202ENST00000438130 NBPF1Q3BBV0 1214 aa12.77□□□□□ -0.37
GTF2I-202ENST00000438130 BRD4O60885 1362 aaPredicted RBP12.77□□□□□ -0.37
GTF2I-202ENST00000438130 COL18A1P39060 1754 aa12.76□□□□□ -0.37
GTF2I-202ENST00000438130 PAK3O75914 559 aaPredicted RBP12.76□□□□□ -0.37
GTF2I-202ENST00000438130 BARGINQ6ZT62 677 aa12.76□□□□□ -0.37
GTF2I-202ENST00000438130 COL5A2P05997 1499 aaPredicted RBP12.76□□□□□ -0.37
GTF2I-202ENST00000438130 TRPM1Q7Z4N2 1603 aa12.76□□□□□ -0.37
GTF2I-202ENST00000438130 PIK3C2AO00443 1686 aa12.76□□□□□ -0.37
GTF2I-202ENST00000438130 CHRNA2Q15822 529 aa12.75□□□□□ -0.37
GTF2I-202ENST00000438130 FAM182BQ5T319 152 aa12.75□□□□□ -0.37
GTF2I-202ENST00000438130 PPIP5K1Q6PFW1 1433 aa12.75□□□□□ -0.37
GTF2I-202ENST00000438130 PARD3Q8TEW0 1356 aa12.75□□□□□ -0.37
GTF2I-202ENST00000438130 WNK3Q9BYP7 1800 aa12.75□□□□□ -0.37
GTF2I-202ENST00000438130 PCDHB8Q9UN66 801 aa12.75□□□□□ -0.37
GTF2I-202ENST00000438130 PCDHB13Q9Y5F0 798 aa12.75□□□□□ -0.37
GTF2I-202ENST00000438130 RGPD3A6NKT7 1758 aaPredicted RBP12.74□□□□□ -0.37
GTF2I-202ENST00000438130 RGPD4Q7Z3J3 1758 aa12.74□□□□□ -0.37
GTF2I-202ENST00000438130 USP6P35125 1406 aa12.74□□□□□ -0.37
GTF2I-202ENST00000438130 A0A0G2JS52 829 aa12.74□□□□□ -0.37
GTF2I-202ENST00000438130 MYT1Q01538 1121 aa12.74□□□□□ -0.37
GTF2I-202ENST00000438130 EN1Q05925 392 aaPredicted RBP12.74□□□□□ -0.37
GTF2I-202ENST00000438130 CAMKK2Q96RR4 588 aa12.74□□□□□ -0.37
GTF2I-202ENST00000438130 LRRC37A3O60309 1634 aa12.73□□□□□ -0.37
GTF2I-202ENST00000438130 CENPJQ9HC77 1338 aaPredicted RBP12.73□□□□□ -0.37
GTF2I-202ENST00000438130 ZC3H6P61129 1189 aaKnown RBP12.73□□□□□ -0.37
GTF2I-202ENST00000438130 SBF2Q86WG5 1849 aa12.73□□□□□ -0.37
GTF2I-202ENST00000438130 AKAP12Q02952 1782 aa12.73□□□□□ -0.37
GTF2I-202ENST00000438130 PSDA5PKW4 1024 aaPredicted RBP12.72□□□□□ -0.37
GTF2I-202ENST00000438130 NUTM2GQ5VZR2 741 aa12.72□□□□□ -0.37
GTF2I-202ENST00000438130 FAM196AQ6ZSG2 479 aa12.72□□□□□ -0.37
GTF2I-202ENST00000438130 PSEN1P49768 467 aa12.71□□□□□ -0.37
GTF2I-202ENST00000438130 LARP1Q6PKG0 1096 aaKnown RBP12.71□□□□□ -0.37
GTF2I-202ENST00000438130 ZNF579Q8NAF0 562 aaKnown RBP12.71□□□□□ -0.37
GTF2I-202ENST00000438130 USP54Q70EL1 1684 aa12.7□□□□□ -0.38
GTF2I-202ENST00000438130 GCP02774 474 aa12.7□□□□□ -0.38
GTF2I-202ENST00000438130 EZH2Q15910 746 aaKnown RBP12.7□□□□□ -0.38
GTF2I-202ENST00000438130 TCP11L2Q8N4U5 519 aa12.7□□□□□ -0.38
GTF2I-202ENST00000438130 ABTB2Q8N961 1025 aa12.7□□□□□ -0.38
GTF2I-202ENST00000438130 STRN4Q9NRL3 753 aa12.7□□□□□ -0.38
GTF2I-202ENST00000438130 THRAP3Q9Y2W1 955 aaKnown RBP12.7□□□□□ -0.38
GTF2I-202ENST00000438130 CRB1P82279 1406 aa12.7□□□□□ -0.38
GTF2I-202ENST00000438130 AATKQ6ZMQ8 1374 aa12.69□□□□□ -0.38
GTF2I-202ENST00000438130 TRIM37O94972 964 aa12.69□□□□□ -0.38
GTF2I-202ENST00000438130 FXR2P51116 673 aaKnown RBP eCLIP12.69□□□□□ -0.38
GTF2I-202ENST00000438130 NLRP13Q86W25 1043 aa12.69□□□□□ -0.38
GTF2I-202ENST00000438130 CABP2Q9NPB3 220 aa12.69□□□□□ -0.38
GTF2I-202ENST00000438130 MON2Q7Z3U7 1717 aa12.68□□□□□ -0.38
GTF2I-202ENST00000438130 NFAT5O94916 1531 aa12.67□□□□□ -0.38
GTF2I-202ENST00000438130 ABCC6O95255 1503 aa12.67□□□□□ -0.38
GTF2I-202ENST00000438130 RGPD5Q99666 1765 aa12.67□□□□□ -0.38
GTF2I-202ENST00000438130 SRPK2P78362 688 aaKnown RBP12.67□□□□□ -0.38
GTF2I-202ENST00000438130 R3HDM1Q15032 1099 aaKnown RBP12.67□□□□□ -0.38
GTF2I-202ENST00000438130 BCL9O00512 1426 aa12.67□□□□□ -0.38
GTF2I-202ENST00000438130 CPSF1Q10570 1443 aaKnown RBP12.67□□□□□ -0.38
GTF2I-202ENST00000438130 L3MBTL2Q969R5 705 aa12.66□□□□□ -0.38
GTF2I-202ENST00000438130 USP35Q9P2H5 1018 aa12.66□□□□□ -0.38
GTF2I-202ENST00000438130 OVOS2A0A0G2JMS6 1433 aa12.65□□□□□ -0.38
GTF2I-202ENST00000438130 OVOS2A0A0J9YW53 1432 aa12.65□□□□□ -0.38
GTF2I-202ENST00000438130 OVOS2Q6IE36 1432 aa12.65□□□□□ -0.38
GTF2I-202ENST00000438130 CABP1Q9NZU7 370 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms