RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 TCP11L2Q8N4U5 519 aa17.91■□□□□ 0.46
HLA-DPA1-243ENST00000437811 KCNH5Q8NCM2 988 aa17.91■□□□□ 0.46
HLA-DPA1-243ENST00000437811 PLEKHF1Q96S99 279 aa17.91■□□□□ 0.46
HLA-DPA1-243ENST00000437811 PNNQ9H307 717 aaKnown RBP17.91■□□□□ 0.46
HLA-DPA1-243ENST00000437811 RNF216Q9NWF9 866 aaPredicted RBP17.91■□□□□ 0.46
HLA-DPA1-243ENST00000437811 FCHSD2O94868 740 aa17.91■□□□□ 0.46
HLA-DPA1-243ENST00000437811 AMPHP49418 695 aa17.91■□□□□ 0.46
HLA-DPA1-243ENST00000437811 HSP90AB2PQ58FF8 381 aa17.91■□□□□ 0.46
HLA-DPA1-243ENST00000437811 RSPH6AQ9H0K4 717 aa17.91■□□□□ 0.46
HLA-DPA1-243ENST00000437811 NHSL1Q5SYE7 1610 aa17.91■□□□□ 0.46
HLA-DPA1-243ENST00000437811 DDX17Q92841 729 aaKnown RBP17.9■□□□□ 0.46
HLA-DPA1-243ENST00000437811 MED1Q15648 1581 aaPredicted RBP17.9■□□□□ 0.46
HLA-DPA1-243ENST00000437811 MAPK8IP3Q9UPT6 1336 aa17.89■□□□□ 0.45
HLA-DPA1-243ENST00000437811 CRYBG1Q9Y4K1 1723 aa17.89■□□□□ 0.45
HLA-DPA1-243ENST00000437811 HOXC9P31274 260 aa17.88■□□□□ 0.45
HLA-DPA1-243ENST00000437811 LMOD2Q6P5Q4 547 aa17.88■□□□□ 0.45
HLA-DPA1-243ENST00000437811 CDCA7LQ96GN5 454 aa17.88■□□□□ 0.45
HLA-DPA1-243ENST00000437811 SPATA31A3Q5VYP0 1347 aa17.87■□□□□ 0.45
HLA-DPA1-243ENST00000437811 PRKAR2BP31323 418 aa17.87■□□□□ 0.45
HLA-DPA1-243ENST00000437811 CCDC27Q2M243 656 aa17.87■□□□□ 0.45
HLA-DPA1-243ENST00000437811 ARHGEF10O15013 1369 aa17.87■□□□□ 0.45
HLA-DPA1-243ENST00000437811 GCP02774 474 aa17.86■□□□□ 0.45
HLA-DPA1-243ENST00000437811 HMOX1P09601 288 aa17.86■□□□□ 0.45
HLA-DPA1-243ENST00000437811 GOLGA2Q08379 1002 aa17.86■□□□□ 0.45
HLA-DPA1-243ENST00000437811 RRP7AQ9Y3A4 280 aaKnown RBP17.86■□□□□ 0.45
HLA-DPA1-243ENST00000437811 SOS2Q07890 1332 aaPredicted RBP17.85■□□□□ 0.45
HLA-DPA1-243ENST00000437811 HOXD11P31277 338 aaPredicted RBP17.84■□□□□ 0.45
HLA-DPA1-243ENST00000437811 TMPOP42166 694 aaKnown RBP17.84■□□□□ 0.45
HLA-DPA1-243ENST00000437811 WWC1Q8IX03 1113 aa17.84■□□□□ 0.45
HLA-DPA1-243ENST00000437811 IP6K1Q92551 441 aa17.84■□□□□ 0.45
HLA-DPA1-243ENST00000437811 NEFMP07197 916 aa17.83■□□□□ 0.45
HLA-DPA1-243ENST00000437811 NEUROD2Q15784 382 aa17.83■□□□□ 0.45
HLA-DPA1-243ENST00000437811 ARHGEF25Q86VW2 580 aa17.83■□□□□ 0.45
HLA-DPA1-243ENST00000437811 IGSF1Q8N6C5 1336 aa17.83■□□□□ 0.44
HLA-DPA1-243ENST00000437811 SLFN5Q08AF3 891 aa17.82■□□□□ 0.44
HLA-DPA1-243ENST00000437811 SUPT16HQ9Y5B9 1047 aaKnown RBP17.82■□□□□ 0.44
HLA-DPA1-243ENST00000437811 KDRP35968 1356 aa17.82■□□□□ 0.44
HLA-DPA1-243ENST00000437811 ROBO1Q9Y6N7 1651 aa17.82■□□□□ 0.44
HLA-DPA1-243ENST00000437811 SULT6B1Q6IMI4 303 aa17.81■□□□□ 0.44
HLA-DPA1-243ENST00000437811 AEBP1Q8IUX7 1158 aa17.81■□□□□ 0.44
HLA-DPA1-243ENST00000437811 ABCC6O95255 1503 aa17.81■□□□□ 0.44
HLA-DPA1-243ENST00000437811 E9PSI1 815 aa17.8■□□□□ 0.44
HLA-DPA1-243ENST00000437811 DUSP27Q5VZP5 1158 aa17.8■□□□□ 0.44
HLA-DPA1-243ENST00000437811 WDR63Q8IWG1 891 aa17.8■□□□□ 0.44
HLA-DPA1-243ENST00000437811 TRMT2AQ8IZ69 625 aaKnown RBP17.8■□□□□ 0.44
HLA-DPA1-243ENST00000437811 AHDC1Q5TGY3 1603 aaPredicted RBP17.8■□□□□ 0.44
HLA-DPA1-243ENST00000437811 NFE2L2Q16236 605 aa17.79■□□□□ 0.44
HLA-DPA1-243ENST00000437811 PHACTR3Q96KR7 559 aa17.79■□□□□ 0.44
HLA-DPA1-243ENST00000437811 EYA1Q99502 592 aa17.79■□□□□ 0.44
HLA-DPA1-243ENST00000437811 ABCA3Q99758 1704 aa17.79■□□□□ 0.44
HLA-DPA1-243ENST00000437811 ZBTB7CA1YPR0 619 aa17.79■□□□□ 0.44
HLA-DPA1-243ENST00000437811 PLEKHG5O94827 1062 aa17.79■□□□□ 0.44
HLA-DPA1-243ENST00000437811 NEFLP07196 543 aa17.79■□□□□ 0.44
HLA-DPA1-243ENST00000437811 SPINK5Q9NQ38 1064 aaPredicted RBP17.79■□□□□ 0.44
HLA-DPA1-243ENST00000437811 TRIM35Q9UPQ4 493 aa17.79■□□□□ 0.44
HLA-DPA1-243ENST00000437811 COL18A1P39060 1754 aa17.78■□□□□ 0.44
HLA-DPA1-243ENST00000437811 RIPK4P57078 832 aa17.78■□□□□ 0.44
HLA-DPA1-243ENST00000437811 DLG5Q8TDM6 1919 aa17.77■□□□□ 0.44
HLA-DPA1-243ENST00000437811 CAMTA1Q9Y6Y1 1673 aa17.77■□□□□ 0.44
HLA-DPA1-243ENST00000437811 LTV1Q96GA3 475 aaPredicted RBP17.77■□□□□ 0.43
HLA-DPA1-243ENST00000437811 RNF123Q5XPI4 1314 aa17.76■□□□□ 0.43
HLA-DPA1-243ENST00000437811 CPDO75976 1380 aa17.76■□□□□ 0.43
HLA-DPA1-243ENST00000437811 RGPD5Q99666 1765 aa17.75■□□□□ 0.43
HLA-DPA1-243ENST00000437811 CABLES1Q8TDN4 633 aa17.75■□□□□ 0.43
HLA-DPA1-243ENST00000437811 RCAN3Q9UKA8 241 aa17.75■□□□□ 0.43
HLA-DPA1-243ENST00000437811 NCAPD2Q15021 1401 aa17.75■□□□□ 0.43
HLA-DPA1-243ENST00000437811 RGPD2P0DJD1 1756 aa17.74■□□□□ 0.43
HLA-DPA1-243ENST00000437811 ZC3H6P61129 1189 aaKnown RBP17.74■□□□□ 0.43
HLA-DPA1-243ENST00000437811 IL16Q14005 1332 aa17.74■□□□□ 0.43
HLA-DPA1-243ENST00000437811 LMO7Q8WWI1 1683 aa17.73■□□□□ 0.43
HLA-DPA1-243ENST00000437811 LMOD3Q0VAK6 560 aa17.73■□□□□ 0.43
HLA-DPA1-243ENST00000437811 FKBP8Q14318 412 aa17.72■□□□□ 0.43
HLA-DPA1-243ENST00000437811 ANKRD24Q8TF21 1146 aa17.72■□□□□ 0.43
HLA-DPA1-243ENST00000437811 FAM208AQ9UK61 1670 aaKnown RBP17.72■□□□□ 0.43
HLA-DPA1-243ENST00000437811 MYH16Q9H6N6 1097 aa17.71■□□□□ 0.43
HLA-DPA1-243ENST00000437811 COL22A1Q8NFW1 1626 aaPredicted RBP17.71■□□□□ 0.43
HLA-DPA1-243ENST00000437811 KIAA0232Q92628 1395 aa17.7■□□□□ 0.42
HLA-DPA1-243ENST00000437811 NBPF6Q5VWK0 638 aa17.7■□□□□ 0.42
HLA-DPA1-243ENST00000437811 NBPF4Q96M43 638 aa17.7■□□□□ 0.42
HLA-DPA1-243ENST00000437811 AXIN2Q9Y2T1 843 aa17.7■□□□□ 0.42
HLA-DPA1-243ENST00000437811 ERBB3P21860 1342 aa17.69■□□□□ 0.42
HLA-DPA1-243ENST00000437811 PHLPP1O60346 1717 aa17.69■□□□□ 0.42
HLA-DPA1-243ENST00000437811 COL16A1Q07092 1604 aaPredicted RBP17.69■□□□□ 0.42
HLA-DPA1-243ENST00000437811 CALD1Q05682 793 aaKnown RBP17.68■□□□□ 0.42
HLA-DPA1-243ENST00000437811 USHBP1Q8N6Y0 703 aa17.68■□□□□ 0.42
HLA-DPA1-243ENST00000437811 LRRC59Q96AG4 307 aaKnown RBP17.68■□□□□ 0.42
HLA-DPA1-243ENST00000437811 TOM1O60784 492 aa17.67■□□□□ 0.42
HLA-DPA1-243ENST00000437811 RRP1P56182 461 aaKnown RBP17.67■□□□□ 0.42
HLA-DPA1-243ENST00000437811 MTHFSDQ2M296 383 aaKnown RBP17.67■□□□□ 0.42
HLA-DPA1-243ENST00000437811 GAS2L2Q8NHY3 880 aa17.67■□□□□ 0.42
HLA-DPA1-243ENST00000437811 FANCIQ9NVI1 1328 aa17.67■□□□□ 0.42
HLA-DPA1-243ENST00000437811 HAP1P54257 671 aaPredicted RBP17.66■□□□□ 0.42
HLA-DPA1-243ENST00000437811 IRX6P78412 446 aaPredicted RBP17.66■□□□□ 0.42
HLA-DPA1-243ENST00000437811 CHRNA2Q15822 529 aa17.66■□□□□ 0.42
HLA-DPA1-243ENST00000437811 LRRC37A3O60309 1634 aa17.65■□□□□ 0.42
HLA-DPA1-243ENST00000437811 THUMPD2Q9BTF0 503 aaKnown RBP17.65■□□□□ 0.42
HLA-DPA1-243ENST00000437811 PRDM11Q9NQV5 511 aa17.65■□□□□ 0.42
HLA-DPA1-243ENST00000437811 ERICH6BQ5W0A0 696 aa17.64■□□□□ 0.41
HLA-DPA1-243ENST00000437811 IFT57Q9NWB7 429 aa17.64■□□□□ 0.41
HLA-DPA1-243ENST00000437811 FAM83GA6ND36 823 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms