RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 RBM27Q9P2N5 1060 aaKnown RBP8.88□□□□□ -0.99
ECHDC1-208ENST00000436638 NLRP1Q9C000 1473 aa8.88□□□□□ -0.99
ECHDC1-208ENST00000436638 NBPF26B4DH59 902 aa8.87□□□□□ -0.99
ECHDC1-208ENST00000436638 IDI1Q13907 227 aa8.87□□□□□ -0.99
ECHDC1-208ENST00000436638 NUDT18Q6ZVK8 323 aa8.87□□□□□ -0.99
ECHDC1-208ENST00000436638 CCER1Q8TC90 406 aaPredicted RBP8.87□□□□□ -0.99
ECHDC1-208ENST00000436638 CCDC144AA2RUR9 1427 aa8.87□□□□□ -0.99
ECHDC1-208ENST00000436638 PTPRTO14522 1441 aa8.87□□□□□ -0.99
ECHDC1-208ENST00000436638 DHX57Q6P158 1386 aaKnown RBP8.86□□□□□ -0.99
ECHDC1-208ENST00000436638 SETD1BQ9UPS6 1966 aaKnown RBP8.86□□□□□ -0.99
ECHDC1-208ENST00000436638 SPHKAPQ2M3C7 1700 aa8.86□□□□□ -0.99
ECHDC1-208ENST00000436638 FAM98CQ17RN3 349 aaKnown RBP8.86□□□□□ -0.99
ECHDC1-208ENST00000436638 THEMISQ8N1K5 641 aaPredicted RBP8.86□□□□□ -0.99
ECHDC1-208ENST00000436638 TTC13Q8NBP0 860 aa8.86□□□□□ -0.99
ECHDC1-208ENST00000436638 ZFRQ96KR1 1074 aaKnown RBP8.86□□□□□ -0.99
ECHDC1-208ENST00000436638 TRPM2O94759 1503 aa8.85□□□□□ -0.99
ECHDC1-208ENST00000436638 A2ML1A8K2U0 1454 aa8.85□□□□□ -0.99
ECHDC1-208ENST00000436638 MYO3AQ8NEV4 1616 aa8.85□□□□□ -0.99
ECHDC1-208ENST00000436638 C3orf80F5H4A9 247 aa8.85□□□□□ -0.99
ECHDC1-208ENST00000436638 HDGFP51858 240 aaKnown RBP8.85□□□□□ -0.99
ECHDC1-208ENST00000436638 HIC1Q14526 733 aa8.85□□□□□ -0.99
ECHDC1-208ENST00000436638 ZNF326Q5BKZ1 582 aaKnown RBP8.85□□□□□ -0.99
ECHDC1-208ENST00000436638 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.85□□□□□ -0.99
ECHDC1-208ENST00000436638 ANKK1Q8NFD2 765 aa8.85□□□□□ -0.99
ECHDC1-208ENST00000436638 SYNMO15061 1565 aa8.85□□□□□ -0.99
ECHDC1-208ENST00000436638 PTPN5P54829 565 aa8.84□□□□□ -0.99
ECHDC1-208ENST00000436638 UGGT1Q9NYU2 1555 aa8.84□□□□□ -0.99
ECHDC1-208ENST00000436638 ANKRD30BQ9BXX2 1392 aa8.84□□□□□ -0.99
ECHDC1-208ENST00000436638 CEP170BQ9Y4F5 1589 aaPredicted RBP8.83□□□□□ -1
ECHDC1-208ENST00000436638 GNPATO15228 680 aa8.83□□□□□ -1
ECHDC1-208ENST00000436638 NEUROD1Q13562 356 aa8.83□□□□□ -1
ECHDC1-208ENST00000436638 LMOD2Q6P5Q4 547 aa8.83□□□□□ -1
ECHDC1-208ENST00000436638 C14orf37Q86TY3 774 aa8.83□□□□□ -1
ECHDC1-208ENST00000436638 HCSTQ9UBK5 93 aa8.83□□□□□ -1
ECHDC1-208ENST00000436638 EID1Q9Y6B2 187 aa8.83□□□□□ -1
ECHDC1-208ENST00000436638 PLA2R1Q13018 1463 aa8.83□□□□□ -1
ECHDC1-208ENST00000436638 PPP1R15AO75807 674 aaPredicted RBP8.82□□□□□ -1
ECHDC1-208ENST00000436638 HSPA2P54652 639 aa8.82□□□□□ -1
ECHDC1-208ENST00000436638 FAM161AQ3B820 660 aa8.82□□□□□ -1
ECHDC1-208ENST00000436638 RGL3Q3MIN7 710 aa8.82□□□□□ -1
ECHDC1-208ENST00000436638 THSD4Q6ZMP0 1018 aa8.82□□□□□ -1
ECHDC1-208ENST00000436638 PIK3C2BO00750 1634 aa8.82□□□□□ -1
ECHDC1-208ENST00000436638 CLSPNQ9HAW4 1339 aa8.81□□□□□ -1
ECHDC1-208ENST00000436638 ADGRB3O60242 1522 aa8.81□□□□□ -1
ECHDC1-208ENST00000436638 CLTCL1P53675 1640 aa8.81□□□□□ -1
ECHDC1-208ENST00000436638 GPR37O15354 613 aa8.81□□□□□ -1
ECHDC1-208ENST00000436638 FECHP22830 423 aa8.81□□□□□ -1
ECHDC1-208ENST00000436638 BCAMP50895 628 aa8.81□□□□□ -1
ECHDC1-208ENST00000436638 ANKLE2Q86XL3 938 aa8.81□□□□□ -1
ECHDC1-208ENST00000436638 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.81□□□□□ -1
ECHDC1-208ENST00000436638 ZNF142P52746 1687 aaPredicted RBP8.81□□□□□ -1
ECHDC1-208ENST00000436638 KIF1BO60333 1816 aa8.8□□□□□ -1
ECHDC1-208ENST00000436638 TXNDC2Q86VQ3 553 aa8.8□□□□□ -1
ECHDC1-208ENST00000436638 RBM46Q8TBY0 533 aaKnown RBP8.8□□□□□ -1
ECHDC1-208ENST00000436638 LRCH3Q96II8 777 aa8.8□□□□□ -1
ECHDC1-208ENST00000436638 SIN3AQ96ST3 1273 aa8.8□□□□□ -1
ECHDC1-208ENST00000436638 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.8□□□□□ -1
ECHDC1-208ENST00000436638 ADGRG1Q9Y653 693 aa8.8□□□□□ -1
ECHDC1-208ENST00000436638 LMTK3Q96Q04 1460 aa8.8□□□□□ -1
ECHDC1-208ENST00000436638 RPGRIP1LQ68CZ1 1315 aa8.8□□□□□ -1
ECHDC1-208ENST00000436638 TMEM2Q9UHN6 1383 aa8.79□□□□□ -1
ECHDC1-208ENST00000436638 SOWAHBA6NEL2 793 aa8.79□□□□□ -1
ECHDC1-208ENST00000436638 SAMD7Q7Z3H4 446 aa8.79□□□□□ -1
ECHDC1-208ENST00000436638 EYA1Q99502 592 aa8.79□□□□□ -1
ECHDC1-208ENST00000436638 UBR1Q8IWV7 1749 aa8.79□□□□□ -1
ECHDC1-208ENST00000436638 TMEM131LA2VDJ0 1609 aa8.79□□□□□ -1
ECHDC1-208ENST00000436638 RIMS2Q9UQ26 1411 aa8.79□□□□□ -1
ECHDC1-208ENST00000436638 TONSLQ96HA7 1378 aa8.78□□□□□ -1
ECHDC1-208ENST00000436638 NUTM2DQ5VT03 806 aaPredicted RBP8.78□□□□□ -1
ECHDC1-208ENST00000436638 KDM5AP29375 1690 aaKnown RBP8.78□□□□□ -1
ECHDC1-208ENST00000436638 OATP04181 439 aa8.77□□□□□ -1.01
ECHDC1-208ENST00000436638 DCAF11Q8TEB1 546 aa8.77□□□□□ -1.01
ECHDC1-208ENST00000436638 SLIT1O75093 1534 aa8.76□□□□□ -1.01
ECHDC1-208ENST00000436638 RNF40O75150 1001 aa8.76□□□□□ -1.01
ECHDC1-208ENST00000436638 TMEM132AQ24JP5 1023 aa8.76□□□□□ -1.01
ECHDC1-208ENST00000436638 HPS5Q9UPZ3 1129 aa8.76□□□□□ -1.01
ECHDC1-208ENST00000436638 SPATA31E1Q6ZUB1 1445 aa8.76□□□□□ -1.01
ECHDC1-208ENST00000436638 SCAF11Q99590 1463 aaKnown RBP8.76□□□□□ -1.01
ECHDC1-208ENST00000436638 ARHGAP23Q9P227 1491 aa8.76□□□□□ -1.01
ECHDC1-208ENST00000436638 NEURL4Q96JN8 1562 aa8.75□□□□□ -1.01
ECHDC1-208ENST00000436638 LTKP29376 864 aa8.75□□□□□ -1.01
ECHDC1-208ENST00000436638 SWT1Q5T5J6 900 aaKnown RBP8.75□□□□□ -1.01
ECHDC1-208ENST00000436638 MYO5BQ9ULV0 1848 aa8.75□□□□□ -1.01
ECHDC1-208ENST00000436638 NPHP4O75161 1426 aaPredicted RBP8.74□□□□□ -1.01
ECHDC1-208ENST00000436638 RCCD1A6NED2 376 aa8.74□□□□□ -1.01
ECHDC1-208ENST00000436638 DNAJB2P25686 324 aa8.74□□□□□ -1.01
ECHDC1-208ENST00000436638 PPP4CP60510 307 aa8.74□□□□□ -1.01
ECHDC1-208ENST00000436638 WBP1LQ9NX94 342 aa8.74□□□□□ -1.01
ECHDC1-208ENST00000436638 TSR3Q9UJK0 312 aaKnown RBP8.74□□□□□ -1.01
ECHDC1-208ENST00000436638 PLEKHG1Q9ULL1 1385 aa8.73□□□□□ -1.01
ECHDC1-208ENST00000436638 ZFYVE9O95405 1425 aa8.73□□□□□ -1.01
ECHDC1-208ENST00000436638 SLC4A3P48751 1232 aa8.73□□□□□ -1.01
ECHDC1-208ENST00000436638 L3MBTL2Q969R5 705 aa8.73□□□□□ -1.01
ECHDC1-208ENST00000436638 NEXMIFQ5QGS0 1516 aa8.73□□□□□ -1.01
ECHDC1-208ENST00000436638 METTL3Q86U44 580 aaKnown RBP8.72□□□□□ -1.01
ECHDC1-208ENST00000436638 KRI1Q8N9T8 703 aaKnown RBP8.72□□□□□ -1.01
ECHDC1-208ENST00000436638 PXYLP1Q8TE99 480 aa8.72□□□□□ -1.01
ECHDC1-208ENST00000436638 ZC3H15Q8WU90 426 aaKnown RBP8.72□□□□□ -1.01
ECHDC1-208ENST00000436638 ADGRF5Q8IZF2 1346 aa8.72□□□□□ -1.01
ECHDC1-208ENST00000436638 POLR1AO95602 1720 aaPredicted RBP8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms