RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 CPS1P31327 1500 aa13.17□□□□□ -0.3
CLSTN1-203ENST00000435891 NUDT16Q96DE0 195 aaKnown RBP13.17□□□□□ -0.3
CLSTN1-203ENST00000435891 FAM83GA6ND36 823 aa13.16□□□□□ -0.3
CLSTN1-203ENST00000435891 VAMP4O75379 141 aa13.16□□□□□ -0.3
CLSTN1-203ENST00000435891 C1orf115Q9H7X2 142 aa13.16□□□□□ -0.3
CLSTN1-203ENST00000435891 UPF2Q9HAU5 1272 aaKnown RBP13.16□□□□□ -0.3
CLSTN1-203ENST00000435891 MFAP1P55081 439 aaKnown RBP13.16□□□□□ -0.3
CLSTN1-203ENST00000435891 ALDH1L2Q3SY69 923 aa13.16□□□□□ -0.3
CLSTN1-203ENST00000435891 SPRYD3Q8NCJ5 442 aa13.16□□□□□ -0.3
CLSTN1-203ENST00000435891 ANTXR1Q9H6X2 564 aa13.16□□□□□ -0.3
CLSTN1-203ENST00000435891 DCTN1Q14203 1278 aa13.15□□□□□ -0.3
CLSTN1-203ENST00000435891 BECN1Q14457 450 aa13.15□□□□□ -0.3
CLSTN1-203ENST00000435891 LNPKQ9C0E8 428 aa13.15□□□□□ -0.3
CLSTN1-203ENST00000435891 IPO8O15397 1037 aaKnown RBP13.15□□□□□ -0.3
CLSTN1-203ENST00000435891 MBIPQ9NS73 344 aa13.15□□□□□ -0.3
CLSTN1-203ENST00000435891 PPP6R1Q9UPN7 881 aa13.15□□□□□ -0.3
CLSTN1-203ENST00000435891 EDC4Q6P2E9 1401 aaKnown RBP13.15□□□□□ -0.3
CLSTN1-203ENST00000435891 REREQ9P2R6 1566 aa13.15□□□□□ -0.3
CLSTN1-203ENST00000435891 PRR36Q9H6K5 1346 aa13.14□□□□□ -0.31
CLSTN1-203ENST00000435891 MRPL50Q8N5N7 158 aaKnown RBP13.14□□□□□ -0.31
CLSTN1-203ENST00000435891 NUTM2FA1L443 756 aa13.13□□□□□ -0.31
CLSTN1-203ENST00000435891 C8orf58Q8NAV2 365 aa13.13□□□□□ -0.31
CLSTN1-203ENST00000435891 CCDC61Q9Y6R9 512 aa13.13□□□□□ -0.31
CLSTN1-203ENST00000435891 HSP90AA2PQ14568 343 aaPredicted RBP13.13□□□□□ -0.31
CLSTN1-203ENST00000435891 ZBTB7BO15156 539 aaPredicted RBP13.13□□□□□ -0.31
CLSTN1-203ENST00000435891 ZNF853P0CG23 659 aa13.13□□□□□ -0.31
CLSTN1-203ENST00000435891 C22orf23Q9BZE7 217 aa13.13□□□□□ -0.31
CLSTN1-203ENST00000435891 NUCB1Q02818 461 aa13.12□□□□□ -0.31
CLSTN1-203ENST00000435891 COG3Q96JB2 828 aa13.12□□□□□ -0.31
CLSTN1-203ENST00000435891 AEBP1Q8IUX7 1158 aa13.12□□□□□ -0.31
CLSTN1-203ENST00000435891 CDK12Q9NYV4 1490 aaPredicted RBP13.11□□□□□ -0.31
CLSTN1-203ENST00000435891 BRPF1P55201 1214 aaPredicted RBP13.11□□□□□ -0.31
CLSTN1-203ENST00000435891 SIRT2Q8IXJ6 389 aa13.11□□□□□ -0.31
CLSTN1-203ENST00000435891 IFT57Q9NWB7 429 aa13.11□□□□□ -0.31
CLSTN1-203ENST00000435891 GNAI1P63096 354 aa13.1□□□□□ -0.31
CLSTN1-203ENST00000435891 TWISTNBQ3B726 338 aaPredicted RBP13.1□□□□□ -0.31
CLSTN1-203ENST00000435891 AATKQ6ZMQ8 1374 aa13.1□□□□□ -0.31
CLSTN1-203ENST00000435891 ROBO2Q9HCK4 1378 aa13.1□□□□□ -0.31
CLSTN1-203ENST00000435891 KRT24Q2M2I5 525 aa13.1□□□□□ -0.31
CLSTN1-203ENST00000435891 CHD1LQ86WJ1 897 aa13.1□□□□□ -0.31
CLSTN1-203ENST00000435891 DLG5Q8TDM6 1919 aa13.1□□□□□ -0.31
CLSTN1-203ENST00000435891 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.09□□□□□ -0.31
CLSTN1-203ENST00000435891 CFAP44Q96MT7 982 aa13.09□□□□□ -0.31
CLSTN1-203ENST00000435891 ESF1Q9H501 851 aaKnown RBP13.09□□□□□ -0.31
CLSTN1-203ENST00000435891 PTCH1Q13635 1447 aa13.08□□□□□ -0.31
CLSTN1-203ENST00000435891 ANKRD45Q5TZF3 282 aa13.08□□□□□ -0.32
CLSTN1-203ENST00000435891 ZNF428Q96B54 188 aa13.08□□□□□ -0.32
CLSTN1-203ENST00000435891 MON2Q7Z3U7 1717 aa13.08□□□□□ -0.32
CLSTN1-203ENST00000435891 PIK3R4Q99570 1358 aa13.07□□□□□ -0.32
CLSTN1-203ENST00000435891 ABCC4O15439 1325 aa13.07□□□□□ -0.32
CLSTN1-203ENST00000435891 SOX12O15370 315 aa13.07□□□□□ -0.32
CLSTN1-203ENST00000435891 EIF4A2Q14240 407 aaKnown RBP13.07□□□□□ -0.32
CLSTN1-203ENST00000435891 HSP90AA1P07900 732 aaKnown RBP13.07□□□□□ -0.32
CLSTN1-203ENST00000435891 SULT6B1Q6IMI4 303 aa13.07□□□□□ -0.32
CLSTN1-203ENST00000435891 TECPR2O15040 1411 aa13.07□□□□□ -0.32
CLSTN1-203ENST00000435891 C3P01024 1663 aa13.07□□□□□ -0.32
CLSTN1-203ENST00000435891 CALD1Q05682 793 aaKnown RBP13.07□□□□□ -0.32
CLSTN1-203ENST00000435891 ARHGAP45Q92619 1136 aa13.07□□□□□ -0.32
CLSTN1-203ENST00000435891 LTKP29376 864 aa13.06□□□□□ -0.32
CLSTN1-203ENST00000435891 HSP90AB2PQ58FF8 381 aa13.06□□□□□ -0.32
CLSTN1-203ENST00000435891 ACEP12821 1306 aa13.05□□□□□ -0.32
CLSTN1-203ENST00000435891 MCM10Q7L590 875 aa13.05□□□□□ -0.32
CLSTN1-203ENST00000435891 FAM43AQ8N2R8 423 aa13.05□□□□□ -0.32
CLSTN1-203ENST00000435891 TNRQ92752 1358 aa13.05□□□□□ -0.32
CLSTN1-203ENST00000435891 TMEM2Q9UHN6 1383 aa13.05□□□□□ -0.32
CLSTN1-203ENST00000435891 TTC21BQ7Z4L5 1316 aa13.05□□□□□ -0.32
CLSTN1-203ENST00000435891 ADAMTS13Q76LX8 1427 aa13.05□□□□□ -0.32
CLSTN1-203ENST00000435891 AKAP12Q02952 1782 aa13.04□□□□□ -0.32
CLSTN1-203ENST00000435891 SIRT1Q96EB6 747 aa13.04□□□□□ -0.32
CLSTN1-203ENST00000435891 SLC26A8Q96RN1 970 aa13.04□□□□□ -0.32
CLSTN1-203ENST00000435891 ZNF692Q9BU19 519 aaPredicted RBP13.04□□□□□ -0.32
CLSTN1-203ENST00000435891 KNDC1Q76NI1 1749 aa13.04□□□□□ -0.32
CLSTN1-203ENST00000435891 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.04□□□□□ -0.32
CLSTN1-203ENST00000435891 CEBPAP49715 358 aaPredicted RBP13.03□□□□□ -0.32
CLSTN1-203ENST00000435891 LMOD3Q0VAK6 560 aa13.03□□□□□ -0.32
CLSTN1-203ENST00000435891 BMP2KLQ5H9B9 411 aa13.03□□□□□ -0.32
CLSTN1-203ENST00000435891 GCC1Q96CN9 775 aa13.03□□□□□ -0.32
CLSTN1-203ENST00000435891 ITSN1Q15811 1721 aa13.03□□□□□ -0.32
CLSTN1-203ENST00000435891 MIS18AQ9NYP9 233 aa13.02□□□□□ -0.33
CLSTN1-203ENST00000435891 RBM25P49756 843 aaKnown RBP13.02□□□□□ -0.33
CLSTN1-203ENST00000435891 KIF2CQ99661 725 aa13.02□□□□□ -0.33
CLSTN1-203ENST00000435891 HDGFP51858 240 aaKnown RBP13.01□□□□□ -0.33
CLSTN1-203ENST00000435891 UBR1Q8IWV7 1749 aa13.01□□□□□ -0.33
CLSTN1-203ENST00000435891 FOXO3O43524 673 aa13.01□□□□□ -0.33
CLSTN1-203ENST00000435891 PLPPR3Q6T4P5 718 aa13.01□□□□□ -0.33
CLSTN1-203ENST00000435891 TBC1D9Q6ZT07 1266 aa13.01□□□□□ -0.33
CLSTN1-203ENST00000435891 OVOS2A0A0J9YW53 1432 aa13.01□□□□□ -0.33
CLSTN1-203ENST00000435891 OVOS2Q6IE36 1432 aa13.01□□□□□ -0.33
CLSTN1-203ENST00000435891 CD2BP2O95400 341 aaKnown RBP13.01□□□□□ -0.33
CLSTN1-203ENST00000435891 PEAK1Q9H792 1746 aa13.01□□□□□ -0.33
CLSTN1-203ENST00000435891 PTPRUQ92729 1446 aa13□□□□□ -0.33
CLSTN1-203ENST00000435891 API5Q9BZZ5 524 aaKnown RBP13□□□□□ -0.33
CLSTN1-203ENST00000435891 KIF13AQ9H1H9 1805 aa13□□□□□ -0.33
CLSTN1-203ENST00000435891 C16orf71Q8IYS4 520 aaPredicted RBP13□□□□□ -0.33
CLSTN1-203ENST00000435891 RGS12O14924 1447 aa13□□□□□ -0.33
CLSTN1-203ENST00000435891 CHL1O00533 1208 aa13□□□□□ -0.33
CLSTN1-203ENST00000435891 RBM42Q9BTD8 480 aaKnown RBP13□□□□□ -0.33
CLSTN1-203ENST00000435891 NRKQ7Z2Y5 1582 aa13□□□□□ -0.33
CLSTN1-203ENST00000435891 USP6P35125 1406 aa12.99□□□□□ -0.33
CLSTN1-203ENST00000435891 GSPT1P15170 499 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms