RNA–Protein interactions for RNA: ENST00000435606.1

LDLRAD4-204, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,032 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-204ENST00000435606 SRCIN1Q9C0H9 1055 aa12.66□□□□□ -0.38
LDLRAD4-204ENST00000435606 ARGLU1Q9NWB6 273 aaPredicted RBP12.66□□□□□ -0.38
LDLRAD4-204ENST00000435606 ERBINQ96RT1 1412 aa12.65□□□□□ -0.38
LDLRAD4-204ENST00000435606 SNAPC4Q5SXM2 1469 aa12.65□□□□□ -0.38
LDLRAD4-204ENST00000435606 ATP2B1P20020 1258 aa12.65□□□□□ -0.38
LDLRAD4-204ENST00000435606 GCC1Q96CN9 775 aa12.65□□□□□ -0.38
LDLRAD4-204ENST00000435606 NOL7Q9UMY1 257 aaKnown RBP12.65□□□□□ -0.38
LDLRAD4-204ENST00000435606 CDKL5O76039 1030 aa12.65□□□□□ -0.38
LDLRAD4-204ENST00000435606 TXLNBQ8N3L3 684 aa12.65□□□□□ -0.38
LDLRAD4-204ENST00000435606 MNS1Q8NEH6 495 aa12.65□□□□□ -0.38
LDLRAD4-204ENST00000435606 ZNF76P36508 570 aa12.65□□□□□ -0.38
LDLRAD4-204ENST00000435606 TMOD3Q9NYL9 352 aa12.65□□□□□ -0.38
LDLRAD4-204ENST00000435606 LRPPRCP42704 1394 aaKnown RBP12.65□□□□□ -0.38
LDLRAD4-204ENST00000435606 BICDL1Q6ZP65 573 aa12.64□□□□□ -0.39
LDLRAD4-204ENST00000435606 PANK1Q8TE04 598 aa12.64□□□□□ -0.39
LDLRAD4-204ENST00000435606 TDO2P48775 406 aa12.64□□□□□ -0.39
LDLRAD4-204ENST00000435606 LRRCC1Q9C099 1032 aa12.64□□□□□ -0.39
LDLRAD4-204ENST00000435606 BMP2KQ9NSY1 1161 aaPredicted RBP12.64□□□□□ -0.39
LDLRAD4-204ENST00000435606 TNIP1Q15025 636 aa12.64□□□□□ -0.39
LDLRAD4-204ENST00000435606 RAI14Q9P0K7 980 aa12.64□□□□□ -0.39
LDLRAD4-204ENST00000435606 CEP126Q9P2H0 1117 aa12.64□□□□□ -0.39
LDLRAD4-204ENST00000435606 CTNNA3Q9UI47 895 aa12.64□□□□□ -0.39
LDLRAD4-204ENST00000435606 LRP2BPQ9P2M1 347 aa12.64□□□□□ -0.39
LDLRAD4-204ENST00000435606 ANKRD30BQ9BXX2 1392 aa12.64□□□□□ -0.39
LDLRAD4-204ENST00000435606 MATR3P43243 847 aaKnown RBP eCLIP12.64□□□□□ -0.39
LDLRAD4-204ENST00000435606 ZNHIT6Q9NWK9 470 aaKnown RBP12.64□□□□□ -0.39
LDLRAD4-204ENST00000435606 FKBP4Q02790 459 aaKnown RBP eCLIP12.63□□□□□ -0.39
LDLRAD4-204ENST00000435606 DACH1Q9UI36 760 aa12.63□□□□□ -0.39
LDLRAD4-204ENST00000435606 UBAC1Q9BSL1 405 aa12.63□□□□□ -0.39
LDLRAD4-204ENST00000435606 SIL1Q9H173 461 aa12.63□□□□□ -0.39
LDLRAD4-204ENST00000435606 CT47B1P0C2W7 299 aaPredicted RBP12.63□□□□□ -0.39
LDLRAD4-204ENST00000435606 ZHX3Q9H4I2 956 aa12.63□□□□□ -0.39
LDLRAD4-204ENST00000435606 CCP110O43303 1012 aa12.63□□□□□ -0.39
LDLRAD4-204ENST00000435606 RAPGEF3O95398 923 aa12.63□□□□□ -0.39
LDLRAD4-204ENST00000435606 STK38Q15208 465 aa12.63□□□□□ -0.39
LDLRAD4-204ENST00000435606 IFT57Q9NWB7 429 aa12.62□□□□□ -0.39
LDLRAD4-204ENST00000435606 ZRSR2Q15696 482 aaKnown RBP12.62□□□□□ -0.39
LDLRAD4-204ENST00000435606 CAVIN4Q5BKX8 364 aa12.62□□□□□ -0.39
LDLRAD4-204ENST00000435606 DAPK1P53355 1430 aa12.62□□□□□ -0.39
LDLRAD4-204ENST00000435606 DCTN1Q14203 1278 aa12.62□□□□□ -0.39
LDLRAD4-204ENST00000435606 HSP90B2PQ58FF3 399 aa12.62□□□□□ -0.39
LDLRAD4-204ENST00000435606 ERCC4Q92889 916 aaPredicted RBP12.62□□□□□ -0.39
LDLRAD4-204ENST00000435606 CYP46A1Q9Y6A2 500 aa12.62□□□□□ -0.39
LDLRAD4-204ENST00000435606 PPP2R1AP30153 589 aa12.62□□□□□ -0.39
LDLRAD4-204ENST00000435606 NUP133Q8WUM0 1156 aa12.62□□□□□ -0.39
LDLRAD4-204ENST00000435606 PAXIP1Q6ZW49 1069 aaPredicted RBP12.62□□□□□ -0.39
LDLRAD4-204ENST00000435606 ERLIN2O94905 339 aa12.61□□□□□ -0.39
LDLRAD4-204ENST00000435606 GNAT3A8MTJ3 354 aa12.61□□□□□ -0.39
LDLRAD4-204ENST00000435606 TTLL12Q14166 644 aaPredicted RBP12.61□□□□□ -0.39
LDLRAD4-204ENST00000435606 ANKRD18AQ8IVF6 992 aa12.61□□□□□ -0.39
LDLRAD4-204ENST00000435606 NGLY1Q96IV0 654 aa12.61□□□□□ -0.39
LDLRAD4-204ENST00000435606 ADAMTS8Q9UP79 889 aa12.61□□□□□ -0.39
LDLRAD4-204ENST00000435606 TROQ12816 1431 aaPredicted RBP12.61□□□□□ -0.39
LDLRAD4-204ENST00000435606 AKAP2Q9Y2D5 859 aa12.61□□□□□ -0.39
LDLRAD4-204ENST00000435606 DHX8Q14562 1220 aaKnown RBP12.61□□□□□ -0.39
LDLRAD4-204ENST00000435606 SLF2Q8IX21 1173 aa12.61□□□□□ -0.39
LDLRAD4-204ENST00000435606 ZC3H6P61129 1189 aaKnown RBP12.6□□□□□ -0.39
LDLRAD4-204ENST00000435606 EXOSC9Q06265 439 aaKnown RBP12.6□□□□□ -0.39
LDLRAD4-204ENST00000435606 STK11IPQ8N1F8 1099 aa12.6□□□□□ -0.39
LDLRAD4-204ENST00000435606 ANKIB1Q9P2G1 1089 aa12.6□□□□□ -0.39
LDLRAD4-204ENST00000435606 KIAA1107Q9UPP5 1409 aa12.6□□□□□ -0.39
LDLRAD4-204ENST00000435606 RPGRQ92834 1020 aaKnown RBP12.6□□□□□ -0.39
LDLRAD4-204ENST00000435606 PPP4R3AQ6IN85 833 aa12.6□□□□□ -0.39
LDLRAD4-204ENST00000435606 WASF1Q92558 559 aa12.6□□□□□ -0.39
LDLRAD4-204ENST00000435606 NOB1Q9ULX3 412 aaKnown RBP12.6□□□□□ -0.39
LDLRAD4-204ENST00000435606 XPCQ01831 940 aaPredicted RBP12.6□□□□□ -0.39
LDLRAD4-204ENST00000435606 AEBP1Q8IUX7 1158 aa12.6□□□□□ -0.39
LDLRAD4-204ENST00000435606 CRACR2BQ8N4Y2 399 aaPredicted RBP12.6□□□□□ -0.39
LDLRAD4-204ENST00000435606 FAM13BQ9NYF5 915 aa12.6□□□□□ -0.39
LDLRAD4-204ENST00000435606 NEBLO76041 1014 aa12.59□□□□□ -0.39
LDLRAD4-204ENST00000435606 HSP90AB3PQ58FF7 597 aa12.59□□□□□ -0.39
LDLRAD4-204ENST00000435606 SMC2O95347 1197 aa12.59□□□□□ -0.39
LDLRAD4-204ENST00000435606 AACSQ86V21 672 aa12.59□□□□□ -0.39
LDLRAD4-204ENST00000435606 SEC63Q9UGP8 760 aaKnown RBP12.59□□□□□ -0.39
LDLRAD4-204ENST00000435606 GSE1Q14687 1217 aa12.59□□□□□ -0.39
LDLRAD4-204ENST00000435606 RABEP1Q15276 862 aa12.59□□□□□ -0.39
LDLRAD4-204ENST00000435606 AMOTQ4VCS5 1084 aa12.58□□□□□ -0.39
LDLRAD4-204ENST00000435606 CFTRP13569 1480 aa12.58□□□□□ -0.39
LDLRAD4-204ENST00000435606 NEK4P51957 841 aa12.58□□□□□ -0.4
LDLRAD4-204ENST00000435606 SLC12A5Q9H2X9 1139 aa12.58□□□□□ -0.4
LDLRAD4-204ENST00000435606 ADAMTS2O95450 1211 aa12.58□□□□□ -0.4
LDLRAD4-204ENST00000435606 USP5P45974 858 aa12.58□□□□□ -0.4
LDLRAD4-204ENST00000435606 BRPF1P55201 1214 aaPredicted RBP12.58□□□□□ -0.4
LDLRAD4-204ENST00000435606 WDR63Q8IWG1 891 aa12.58□□□□□ -0.4
LDLRAD4-204ENST00000435606 TMEM87AQ8NBN3 555 aa12.58□□□□□ -0.4
LDLRAD4-204ENST00000435606 TANGO6Q9C0B7 1094 aa12.58□□□□□ -0.4
LDLRAD4-204ENST00000435606 CCDC61Q9Y6R9 512 aa12.58□□□□□ -0.4
LDLRAD4-204ENST00000435606 METTL24Q5JXM2 366 aa12.58□□□□□ -0.4
LDLRAD4-204ENST00000435606 AIDAQ96BJ3 306 aa12.58□□□□□ -0.4
LDLRAD4-204ENST00000435606 NUDT16Q96DE0 195 aaKnown RBP12.58□□□□□ -0.4
LDLRAD4-204ENST00000435606 MBD3O95983 291 aa12.57□□□□□ -0.4
LDLRAD4-204ENST00000435606 IFIT1P09914 478 aaKnown RBP12.57□□□□□ -0.4
LDLRAD4-204ENST00000435606 KRT32Q14532 448 aa12.57□□□□□ -0.4
LDLRAD4-204ENST00000435606 TOPBP1Q92547 1522 aa12.57□□□□□ -0.4
LDLRAD4-204ENST00000435606 CD109Q6YHK3 1445 aa12.57□□□□□ -0.4
LDLRAD4-204ENST00000435606 TTLL5Q6EMB2 1281 aa12.57□□□□□ -0.4
LDLRAD4-204ENST00000435606 POLR3DP05423 398 aaPredicted RBP12.57□□□□□ -0.4
LDLRAD4-204ENST00000435606 DEF6Q9H4E7 631 aa12.57□□□□□ -0.4
LDLRAD4-204ENST00000435606 POTEJP0CG39 1038 aa12.56□□□□□ -0.4
LDLRAD4-204ENST00000435606 DNMBPQ6XZF7 1577 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms