RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 MNS1Q8NEH6 495 aa8.96□□□□□ -0.97
GARNL3-205ENST00000435213 PMFBP1Q8TBY8 1022 aa8.96□□□□□ -0.97
GARNL3-205ENST00000435213 TBC1D32Q96NH3 1257 aa8.96□□□□□ -0.97
GARNL3-205ENST00000435213 SLKQ9H2G2 1235 aaPredicted RBP8.96□□□□□ -0.97
GARNL3-205ENST00000435213 MPNDQ8N594 471 aa8.96□□□□□ -0.98
GARNL3-205ENST00000435213 RNF217Q8TC41 542 aa8.96□□□□□ -0.98
GARNL3-205ENST00000435213 SIRT1Q96EB6 747 aa8.96□□□□□ -0.98
GARNL3-205ENST00000435213 SLC26A8Q96RN1 970 aa8.96□□□□□ -0.98
GARNL3-205ENST00000435213 OGFRQ9NZT2 677 aa8.96□□□□□ -0.98
GARNL3-205ENST00000435213 SHPRHQ149N8 1683 aa8.96□□□□□ -0.98
GARNL3-205ENST00000435213 BCAR3O75815 825 aa8.96□□□□□ -0.98
GARNL3-205ENST00000435213 NBPF6Q5VWK0 638 aa8.96□□□□□ -0.98
GARNL3-205ENST00000435213 NBPF5PQ86XG9 351 aaPredicted RBP8.96□□□□□ -0.98
GARNL3-205ENST00000435213 NBPF4Q96M43 638 aa8.96□□□□□ -0.98
GARNL3-205ENST00000435213 TDO2P48775 406 aa8.95□□□□□ -0.98
GARNL3-205ENST00000435213 XPCQ01831 940 aaPredicted RBP8.95□□□□□ -0.98
GARNL3-205ENST00000435213 CREBRFQ8IUR6 639 aa8.95□□□□□ -0.98
GARNL3-205ENST00000435213 OTUD6BQ8N6M0 293 aa8.95□□□□□ -0.98
GARNL3-205ENST00000435213 MAP3K4Q9Y6R4 1608 aa8.95□□□□□ -0.98
GARNL3-205ENST00000435213 TRPM2O94759 1503 aa8.95□□□□□ -0.98
GARNL3-205ENST00000435213 SEC24BO95487 1268 aa8.95□□□□□ -0.98
GARNL3-205ENST00000435213 NBPF10Q6P3W6 841 aaKnown RBP8.95□□□□□ -0.98
GARNL3-205ENST00000435213 DNAJC5Q9H3Z4 198 aa8.95□□□□□ -0.98
GARNL3-205ENST00000435213 BSDC1Q9NW68 430 aaPredicted RBP8.95□□□□□ -0.98
GARNL3-205ENST00000435213 FEZ2Q9UHY8 353 aaPredicted RBP8.95□□□□□ -0.98
GARNL3-205ENST00000435213 ICE2Q659A1 982 aa8.94□□□□□ -0.98
GARNL3-205ENST00000435213 NEURL4Q96JN8 1562 aa8.94□□□□□ -0.98
GARNL3-205ENST00000435213 SPDYE4A6NLX3 237 aa8.94□□□□□ -0.98
GARNL3-205ENST00000435213 ARID4AP29374 1257 aaPredicted RBP8.94□□□□□ -0.98
GARNL3-205ENST00000435213 DONSONQ9NYP3 566 aa8.94□□□□□ -0.98
GARNL3-205ENST00000435213 RIMBP3CA6NJZ7 1639 aa8.94□□□□□ -0.98
GARNL3-205ENST00000435213 RIMBP3BA6NNM3 1639 aa8.94□□□□□ -0.98
GARNL3-205ENST00000435213 RIMBP3Q9UFD9 1639 aa8.94□□□□□ -0.98
GARNL3-205ENST00000435213 NASPP49321 788 aaPredicted RBP8.94□□□□□ -0.98
GARNL3-205ENST00000435213 SPINK5Q9NQ38 1064 aaPredicted RBP8.94□□□□□ -0.98
GARNL3-205ENST00000435213 ZNF853P0CG23 659 aa8.93□□□□□ -0.98
GARNL3-205ENST00000435213 ZKSCAN8Q15776 578 aaPredicted RBP8.93□□□□□ -0.98
GARNL3-205ENST00000435213 SKOR2Q2VWA4 1001 aaPredicted RBP8.93□□□□□ -0.98
GARNL3-205ENST00000435213 TBC1D2Q9BYX2 928 aa8.93□□□□□ -0.98
GARNL3-205ENST00000435213 APAF1O14727 1248 aa8.93□□□□□ -0.98
GARNL3-205ENST00000435213 RBM25P49756 843 aaKnown RBP8.93□□□□□ -0.98
GARNL3-205ENST00000435213 RSPH14Q9UHP6 348 aa8.93□□□□□ -0.98
GARNL3-205ENST00000435213 KIF16BQ96L93 1317 aa8.93□□□□□ -0.98
GARNL3-205ENST00000435213 MYO3AQ8NEV4 1616 aa8.93□□□□□ -0.98
GARNL3-205ENST00000435213 ARHGAP5Q13017 1502 aa8.93□□□□□ -0.98
GARNL3-205ENST00000435213 CFAP74Q9C0B2 1584 aa8.92□□□□□ -0.98
GARNL3-205ENST00000435213 GTF2F1P35269 517 aaKnown RBP eCLIP8.92□□□□□ -0.98
GARNL3-205ENST00000435213 MLECQ14165 292 aa8.92□□□□□ -0.98
GARNL3-205ENST00000435213 CCDC146Q8IYE0 955 aa8.92□□□□□ -0.98
GARNL3-205ENST00000435213 IQSEC2Q5JU85 1478 aa8.92□□□□□ -0.98
GARNL3-205ENST00000435213 PPRC1Q5VV67 1664 aaKnown RBP8.92□□□□□ -0.98
GARNL3-205ENST00000435213 GUCY2CP25092 1073 aa8.92□□□□□ -0.98
GARNL3-205ENST00000435213 ZKSCAN5Q9Y2L8 839 aa8.92□□□□□ -0.98
GARNL3-205ENST00000435213 GOLGA6L6A8MZA4 724 aa8.92□□□□□ -0.98
GARNL3-205ENST00000435213 CHMP5Q9NZZ3 219 aa8.92□□□□□ -0.98
GARNL3-205ENST00000435213 ZBTB12Q9Y330 459 aaPredicted RBP8.92□□□□□ -0.98
GARNL3-205ENST00000435213 MRVI1Q9Y6F6 885 aa8.92□□□□□ -0.98
GARNL3-205ENST00000435213 POLR3AO14802 1390 aaPredicted RBP8.92□□□□□ -0.98
GARNL3-205ENST00000435213 RTEL1-TNFRSF6BF6WH68 1400 aa8.92□□□□□ -0.98
GARNL3-205ENST00000435213 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.92□□□□□ -0.98
GARNL3-205ENST00000435213 CLTCL1P53675 1640 aa8.91□□□□□ -0.98
GARNL3-205ENST00000435213 RASSF4Q9H2L5 321 aa8.91□□□□□ -0.98
GARNL3-205ENST00000435213 DHX16O60231 1041 aaKnown RBP8.91□□□□□ -0.98
GARNL3-205ENST00000435213 SLFN14P0C7P3 912 aa8.91□□□□□ -0.98
GARNL3-205ENST00000435213 NOP2P46087 812 aaKnown RBP8.91□□□□□ -0.98
GARNL3-205ENST00000435213 ZNF710Q8N1W2 664 aa8.91□□□□□ -0.98
GARNL3-205ENST00000435213 CWC22Q9HCG8 908 aaKnown RBP8.91□□□□□ -0.98
GARNL3-205ENST00000435213 STK26Q9P289 416 aa8.91□□□□□ -0.98
GARNL3-205ENST00000435213 COG6Q9Y2V7 657 aa8.91□□□□□ -0.98
GARNL3-205ENST00000435213 USP32Q8NFA0 1604 aa8.91□□□□□ -0.98
GARNL3-205ENST00000435213 PANK1Q8TE04 598 aa8.9□□□□□ -0.98
GARNL3-205ENST00000435213 TET3O43151 1660 aa8.9□□□□□ -0.98
GARNL3-205ENST00000435213 DEPDC5O75140 1603 aa8.9□□□□□ -0.98
GARNL3-205ENST00000435213 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.9□□□□□ -0.98
GARNL3-205ENST00000435213 RWDD1Q9H446 243 aaPredicted RBP8.89□□□□□ -0.99
GARNL3-205ENST00000435213 IFT172Q9UG01 1749 aa8.89□□□□□ -0.99
GARNL3-205ENST00000435213 NCOA3Q9Y6Q9 1424 aa8.89□□□□□ -0.99
GARNL3-205ENST00000435213 FAM69CQ0P6D2 419 aa8.89□□□□□ -0.99
GARNL3-205ENST00000435213 SGSM3Q96HU1 749 aa8.89□□□□□ -0.99
GARNL3-205ENST00000435213 MED4Q9NPJ6 270 aa8.89□□□□□ -0.99
GARNL3-205ENST00000435213 PDZRN3Q9UPQ7 1066 aa8.89□□□□□ -0.99
GARNL3-205ENST00000435213 KANK1Q14678 1352 aa8.89□□□□□ -0.99
GARNL3-205ENST00000435213 ERVK-7P63135 1459 aa8.89□□□□□ -0.99
GARNL3-205ENST00000435213 ZC3H13Q5T200 1668 aaKnown RBP8.89□□□□□ -0.99
GARNL3-205ENST00000435213 ABCA6Q8N139 1617 aa8.88□□□□□ -0.99
GARNL3-205ENST00000435213 TERF2Q15554 542 aa8.88□□□□□ -0.99
GARNL3-205ENST00000435213 GOLGA6L1Q8N7Z2 621 aa8.88□□□□□ -0.99
GARNL3-205ENST00000435213 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.88□□□□□ -0.99
GARNL3-205ENST00000435213 PTPRTO14522 1441 aa8.88□□□□□ -0.99
GARNL3-205ENST00000435213 CCDC39Q9UFE4 941 aa8.88□□□□□ -0.99
GARNL3-205ENST00000435213 DMRT2Q9Y5R5 561 aa8.88□□□□□ -0.99
GARNL3-205ENST00000435213 INO80Q9ULG1 1556 aaPredicted RBP8.88□□□□□ -0.99
GARNL3-205ENST00000435213 MPHOSPH10O00566 681 aaKnown RBP8.88□□□□□ -0.99
GARNL3-205ENST00000435213 RARSP54136 660 aaKnown RBP8.88□□□□□ -0.99
GARNL3-205ENST00000435213 LRCH2Q5VUJ6 765 aa8.88□□□□□ -0.99
GARNL3-205ENST00000435213 MYOM2P54296 1465 aa8.88□□□□□ -0.99
GARNL3-205ENST00000435213 PAIP2Q9BPZ3 127 aaKnown RBP8.87□□□□□ -0.99
GARNL3-205ENST00000435213 PLCB2Q00722 1185 aa8.87□□□□□ -0.99
GARNL3-205ENST00000435213 PCDHB15Q9Y5E8 787 aa8.87□□□□□ -0.99
GARNL3-205ENST00000435213 ABCC1P33527 1531 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms