RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 ANKRD24Q8TF21 1146 aa14.72□□□□□ -0.05
UBE3B-203ENST00000434735 LMOD1P29536 600 aaPredicted RBP14.72□□□□□ -0.05
UBE3B-203ENST00000434735 FKBP4Q02790 459 aaKnown RBP eCLIP14.72□□□□□ -0.05
UBE3B-203ENST00000434735 FOXD4L6Q3SYB3 417 aaPredicted RBP14.72□□□□□ -0.05
UBE3B-203ENST00000434735 FOXD4L3Q6VB84 417 aaPredicted RBP14.72□□□□□ -0.05
UBE3B-203ENST00000434735 FBXO3Q9UK99 471 aa14.72□□□□□ -0.05
UBE3B-203ENST00000434735 JDP2Q8WYK2 163 aa14.72□□□□□ -0.05
UBE3B-203ENST00000434735 FAM98CQ17RN3 349 aaKnown RBP14.71□□□□□ -0.05
UBE3B-203ENST00000434735 FAM161AQ3B820 660 aa14.71□□□□□ -0.05
UBE3B-203ENST00000434735 CCDC47Q96A33 483 aaKnown RBP14.71□□□□□ -0.05
UBE3B-203ENST00000434735 MIS18AQ9NYP9 233 aa14.71□□□□□ -0.05
UBE3B-203ENST00000434735 DDX46Q7L014 1031 aaKnown RBP14.71□□□□□ -0.05
UBE3B-203ENST00000434735 TWISTNBQ3B726 338 aaPredicted RBP14.71□□□□□ -0.05
UBE3B-203ENST00000434735 DNAJC5Q9H3Z4 198 aa14.71□□□□□ -0.05
UBE3B-203ENST00000434735 TPM3P06753 285 aa14.71□□□□□ -0.06
UBE3B-203ENST00000434735 CAVIN4Q5BKX8 364 aa14.71□□□□□ -0.06
UBE3B-203ENST00000434735 DDX19BQ9UMR2 479 aa14.71□□□□□ -0.06
UBE3B-203ENST00000434735 MYO1BO43795 1136 aa14.7□□□□□ -0.06
UBE3B-203ENST00000434735 ST18O60284 1047 aa14.7□□□□□ -0.06
UBE3B-203ENST00000434735 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.7□□□□□ -0.06
UBE3B-203ENST00000434735 CCDC141Q6ZP82 1450 aa14.7□□□□□ -0.06
UBE3B-203ENST00000434735 KIF21BO75037 1637 aa14.7□□□□□ -0.06
UBE3B-203ENST00000434735 CEP126Q9P2H0 1117 aa14.69□□□□□ -0.06
UBE3B-203ENST00000434735 NF2P35240 595 aa14.69□□□□□ -0.06
UBE3B-203ENST00000434735 SAFBQ15424 915 aaKnown RBP eCLIP14.69□□□□□ -0.06
UBE3B-203ENST00000434735 AMOTQ4VCS5 1084 aa14.69□□□□□ -0.06
UBE3B-203ENST00000434735 DISP3Q9P2K9 1392 aa14.69□□□□□ -0.06
UBE3B-203ENST00000434735 GNAI3P08754 354 aa14.69□□□□□ -0.06
UBE3B-203ENST00000434735 TCP11L2Q8N4U5 519 aa14.69□□□□□ -0.06
UBE3B-203ENST00000434735 ZBTB3Q9H5J0 574 aa14.69□□□□□ -0.06
UBE3B-203ENST00000434735 METTL24Q5JXM2 366 aa14.69□□□□□ -0.06
UBE3B-203ENST00000434735 VTI1AQ96AJ9 217 aa14.69□□□□□ -0.06
UBE3B-203ENST00000434735 IFNL2Q8IZJ0 200 aa14.69□□□□□ -0.06
UBE3B-203ENST00000434735 ABCA10Q8WWZ4 1543 aa14.68□□□□□ -0.06
UBE3B-203ENST00000434735 BICRAQ9NZM4 1560 aa14.68□□□□□ -0.06
UBE3B-203ENST00000434735 GJA3Q9Y6H8 435 aa14.68□□□□□ -0.06
UBE3B-203ENST00000434735 ZCRB1Q8TBF4 217 aaKnown RBP14.68□□□□□ -0.06
UBE3B-203ENST00000434735 NACAP1Q9BZK3 213 aa14.68□□□□□ -0.06
UBE3B-203ENST00000434735 BRMS1Q9HCU9 246 aa14.68□□□□□ -0.06
UBE3B-203ENST00000434735 GOLGA6L1Q8N7Z2 621 aa14.68□□□□□ -0.06
UBE3B-203ENST00000434735 PCMTD1Q96MG8 357 aaPredicted RBP14.68□□□□□ -0.06
UBE3B-203ENST00000434735 SRCIN1Q9C0H9 1055 aa14.68□□□□□ -0.06
UBE3B-203ENST00000434735 SCLT1Q96NL6 688 aa14.67□□□□□ -0.06
UBE3B-203ENST00000434735 UHRF1BP1LA0JNW5 1464 aa14.67□□□□□ -0.06
UBE3B-203ENST00000434735 A0A087WZG4 1122 aa14.67□□□□□ -0.06
UBE3B-203ENST00000434735 SETDB2Q96T68 719 aa14.67□□□□□ -0.06
UBE3B-203ENST00000434735 DZIP1Q86YF9 867 aaKnown RBP14.67□□□□□ -0.06
UBE3B-203ENST00000434735 FEZ1Q99689 392 aa14.67□□□□□ -0.06
UBE3B-203ENST00000434735 TPM2P07951 284 aa14.67□□□□□ -0.06
UBE3B-203ENST00000434735 USP5P45974 858 aa14.67□□□□□ -0.06
UBE3B-203ENST00000434735 EHBP1L1Q8N3D4 1523 aa14.67□□□□□ -0.06
UBE3B-203ENST00000434735 SMARCC1Q92922 1105 aaPredicted RBP14.67□□□□□ -0.06
UBE3B-203ENST00000434735 ATP2B1P20020 1258 aa14.66□□□□□ -0.06
UBE3B-203ENST00000434735 RXRBP28702 533 aa14.66□□□□□ -0.06
UBE3B-203ENST00000434735 RTCBQ9Y3I0 505 aaKnown RBP14.66□□□□□ -0.06
UBE3B-203ENST00000434735 EFCAB5A4FU69 1503 aa14.66□□□□□ -0.06
UBE3B-203ENST00000434735 POLR3DP05423 398 aaPredicted RBP14.66□□□□□ -0.06
UBE3B-203ENST00000434735 IDH1O75874 414 aaKnown RBP14.65□□□□□ -0.06
UBE3B-203ENST00000434735 XBP1P17861 261 aa14.65□□□□□ -0.06
UBE3B-203ENST00000434735 HSP90AB3PQ58FF7 597 aa14.65□□□□□ -0.06
UBE3B-203ENST00000434735 ZNF526Q8TF50 670 aaPredicted RBP14.65□□□□□ -0.06
UBE3B-203ENST00000434735 KIF14Q15058 1648 aa14.65□□□□□ -0.06
UBE3B-203ENST00000434735 FMNL2Q96PY5 1086 aa14.65□□□□□ -0.06
UBE3B-203ENST00000434735 MYD88Q99836 296 aa14.65□□□□□ -0.06
UBE3B-203ENST00000434735 ACEP12821 1306 aa14.65□□□□□ -0.06
UBE3B-203ENST00000434735 TSR1Q2NL82 804 aaKnown RBP14.64□□□□□ -0.07
UBE3B-203ENST00000434735 MCM10Q7L590 875 aa14.64□□□□□ -0.07
UBE3B-203ENST00000434735 OGFOD1Q8N543 542 aa14.64□□□□□ -0.07
UBE3B-203ENST00000434735 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.64□□□□□ -0.072e-6■■■■■ 231.7
UBE3B-203ENST00000434735 CNTLNQ9NXG0 1405 aa14.64□□□□□ -0.07
UBE3B-203ENST00000434735 CA8P35219 290 aa14.64□□□□□ -0.07
UBE3B-203ENST00000434735 QTRT2Q9H974 415 aaKnown RBP14.64□□□□□ -0.07
UBE3B-203ENST00000434735 ZRANB1Q9UGI0 708 aa14.64□□□□□ -0.07
UBE3B-203ENST00000434735 IFIT1P09914 478 aaKnown RBP14.64□□□□□ -0.07
UBE3B-203ENST00000434735 TDO2P48775 406 aa14.64□□□□□ -0.07
UBE3B-203ENST00000434735 RTN4Q9NQC3 1192 aaKnown RBP14.64□□□□□ -0.07
UBE3B-203ENST00000434735 PPP1R42Q7Z4L9 355 aa14.63□□□□□ -0.07
UBE3B-203ENST00000434735 TSR2Q969E8 191 aaKnown RBP14.62□□□□□ -0.07
UBE3B-203ENST00000434735 KCNA6P17658 529 aa14.62□□□□□ -0.07
UBE3B-203ENST00000434735 F8W031 263 aaPredicted RBP14.62□□□□□ -0.07
UBE3B-203ENST00000434735 EXOSC9Q06265 439 aaKnown RBP14.62□□□□□ -0.07
UBE3B-203ENST00000434735 TEX13AQ9BXU3 409 aaPredicted RBP14.62□□□□□ -0.07
UBE3B-203ENST00000434735 HDAC9Q9UKV0 1011 aa14.62□□□□□ -0.07
UBE3B-203ENST00000434735 DAPK1P53355 1430 aa14.62□□□□□ -0.07
UBE3B-203ENST00000434735 ADGRF5Q8IZF2 1346 aa14.62□□□□□ -0.07
UBE3B-203ENST00000434735 ZNF76P36508 570 aa14.62□□□□□ -0.07
UBE3B-203ENST00000434735 GNPATO15228 680 aa14.61□□□□□ -0.07
UBE3B-203ENST00000434735 IL2RBP14784 551 aa14.61□□□□□ -0.07
UBE3B-203ENST00000434735 SLAIN2Q9P270 581 aa14.61□□□□□ -0.07
UBE3B-203ENST00000434735 ERICH3Q5RHP9 1530 aa14.61□□□□□ -0.07
UBE3B-203ENST00000434735 ERC1Q8IUD2 1116 aa14.61□□□□□ -0.07
UBE3B-203ENST00000434735 PIBF1Q8WXW3 757 aa14.61□□□□□ -0.07
UBE3B-203ENST00000434735 EMILIN1Q9Y6C2 1016 aa14.61□□□□□ -0.07
UBE3B-203ENST00000434735 ZMYM3Q14202 1370 aa14.61□□□□□ -0.07
UBE3B-203ENST00000434735 KRT18P05783 430 aaKnown RBP14.61□□□□□ -0.07
UBE3B-203ENST00000434735 EAPPQ56P03 285 aaPredicted RBP14.61□□□□□ -0.07
UBE3B-203ENST00000434735 ZNF772Q68DY9 489 aaPredicted RBP14.61□□□□□ -0.07
UBE3B-203ENST00000434735 NUP133Q8WUM0 1156 aa14.61□□□□□ -0.07
UBE3B-203ENST00000434735 NAIPQ13075 1403 aa14.61□□□□□ -0.07
UBE3B-203ENST00000434735 PRKRIP1Q9H875 184 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms