RNA–Protein interactions for RNA: ENST00000434658.6

FAM3A-212, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-212ENST00000434658 TTC21AQ8NDW8 1320 aa24.22■■□□□ 1.47
FAM3A-212ENST00000434658 NLRP6P59044 892 aa24.21■■□□□ 1.47
FAM3A-212ENST00000434658 NGLY1Q96IV0 654 aa24.21■■□□□ 1.47
FAM3A-212ENST00000434658 E9PSI1 815 aa24.2■■□□□ 1.46
FAM3A-212ENST00000434658 RGS17Q9UGC6 210 aaPredicted RBP24.2■■□□□ 1.46
FAM3A-212ENST00000434658 NRKQ7Z2Y5 1582 aa24.19■■□□□ 1.46
FAM3A-212ENST00000434658 TCERG1O14776 1098 aaKnown RBP24.19■■□□□ 1.46
FAM3A-212ENST00000434658 ABCA3Q99758 1704 aa24.19■■□□□ 1.46
FAM3A-212ENST00000434658 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.19■■□□□ 1.46
FAM3A-212ENST00000434658 EDC4Q6P2E9 1401 aaKnown RBP24.18■■□□□ 1.46
FAM3A-212ENST00000434658 AFF2P51816 1311 aa24.17■■□□□ 1.46
FAM3A-212ENST00000434658 C20orf194Q5TEA3 1177 aa24.17■■□□□ 1.46
FAM3A-212ENST00000434658 SPINK5Q9NQ38 1064 aaPredicted RBP24.17■■□□□ 1.46
FAM3A-212ENST00000434658 PIK3C2AO00443 1686 aa24.16■■□□□ 1.46
FAM3A-212ENST00000434658 ANKRD26Q9UPS8 1709 aa24.16■■□□□ 1.46
FAM3A-212ENST00000434658 MARF1Q9Y4F3 1742 aaKnown RBP24.16■■□□□ 1.46
FAM3A-212ENST00000434658 CRYBG1Q9Y4K1 1723 aa24.16■■□□□ 1.46
FAM3A-212ENST00000434658 NME9Q86XW9 330 aa24.16■■□□□ 1.46
FAM3A-212ENST00000434658 USP19O94966 1318 aa24.15■■□□□ 1.46
FAM3A-212ENST00000434658 MS4A1P11836 297 aa24.14■■□□□ 1.46
FAM3A-212ENST00000434658 ZRANB1Q9UGI0 708 aa24.14■■□□□ 1.46
FAM3A-212ENST00000434658 ZNF772Q68DY9 489 aaPredicted RBP24.14■■□□□ 1.45
FAM3A-212ENST00000434658 FAM83GA6ND36 823 aa24.13■■□□□ 1.45
FAM3A-212ENST00000434658 GCP02774 474 aa24.13■■□□□ 1.45
FAM3A-212ENST00000434658 TNNT2P45379 298 aaPredicted RBP24.13■■□□□ 1.45
FAM3A-212ENST00000434658 FNBP4Q8N3X1 1017 aaPredicted RBP24.13■■□□□ 1.45
FAM3A-212ENST00000434658 RUNDC1Q96C34 613 aa24.13■■□□□ 1.45
FAM3A-212ENST00000434658 CFAP53Q96M91 514 aa24.13■■□□□ 1.45
FAM3A-212ENST00000434658 PHRF1Q9P1Y6 1649 aaKnown RBP24.13■■□□□ 1.45
FAM3A-212ENST00000434658 MTHFSP49914 203 aa24.12■■□□□ 1.45
FAM3A-212ENST00000434658 ZC3H6P61129 1189 aaKnown RBP24.12■■□□□ 1.45
FAM3A-212ENST00000434658 WWC1Q8IX03 1113 aa24.12■■□□□ 1.45
FAM3A-212ENST00000434658 USP21Q9UK80 565 aa24.11■■□□□ 1.45
FAM3A-212ENST00000434658 USP31Q70CQ4 1352 aa24.11■■□□□ 1.45
FAM3A-212ENST00000434658 POTEAQ6S8J7 498 aa24.1■■□□□ 1.45
FAM3A-212ENST00000434658 ERICH6Q7L0X2 663 aa24.1■■□□□ 1.45
FAM3A-212ENST00000434658 PRDM11Q9NQV5 511 aa24.1■■□□□ 1.45
FAM3A-212ENST00000434658 KIAA0232Q92628 1395 aa24.09■■□□□ 1.45
FAM3A-212ENST00000434658 KDM2BQ8NHM5 1336 aa24.09■■□□□ 1.45
FAM3A-212ENST00000434658 KIF20BQ96Q89 1820 aa24.09■■□□□ 1.45
FAM3A-212ENST00000434658 NCBP3Q53F19 620 aaKnown RBP24.08■■□□□ 1.45
FAM3A-212ENST00000434658 SLIT3O75094 1523 aa24.08■■□□□ 1.44
FAM3A-212ENST00000434658 SOX12O15370 315 aa24.07■■□□□ 1.44
FAM3A-212ENST00000434658 KCNH5Q8NCM2 988 aa24.07■■□□□ 1.44
FAM3A-212ENST00000434658 FYB1O15117 783 aa24.06■■□□□ 1.44
FAM3A-212ENST00000434658 ANP32AP39687 249 aaKnown RBP24.06■■□□□ 1.44
FAM3A-212ENST00000434658 CHRNA2Q15822 529 aa24.06■■□□□ 1.44
FAM3A-212ENST00000434658 QTRT2Q9H974 415 aaKnown RBP24.06■■□□□ 1.44
FAM3A-212ENST00000434658 SLIT2O94813 1529 aa24.06■■□□□ 1.44
FAM3A-212ENST00000434658 GGNBP2Q9H3C7 697 aa24.05■■□□□ 1.44
FAM3A-212ENST00000434658 BCL9LQ86UU0 1499 aa24.05■■□□□ 1.44
FAM3A-212ENST00000434658 TCP11L2Q8N4U5 519 aa24.05■■□□□ 1.44
FAM3A-212ENST00000434658 CPDO75976 1380 aa24.04■■□□□ 1.44
FAM3A-212ENST00000434658 ZBTB7CA1YPR0 619 aa24.04■■□□□ 1.44
FAM3A-212ENST00000434658 CCDC27Q2M243 656 aa24.04■■□□□ 1.44
FAM3A-212ENST00000434658 CENPQQ7L2Z9 268 aaPredicted RBP24.04■■□□□ 1.44
FAM3A-212ENST00000434658 UNC5CLQ8IV45 518 aa24.04■■□□□ 1.44
FAM3A-212ENST00000434658 COG3Q96JB2 828 aa24.04■■□□□ 1.44
FAM3A-212ENST00000434658 BTG4Q9NY30 223 aa24.04■■□□□ 1.44
FAM3A-212ENST00000434658 COL14A1Q05707 1796 aaKnown RBP24.04■■□□□ 1.44
FAM3A-212ENST00000434658 PLCH1Q4KWH8 1693 aa24.03■■□□□ 1.44
FAM3A-212ENST00000434658 USP54Q70EL1 1684 aa24.03■■□□□ 1.44
FAM3A-212ENST00000434658 WDR63Q8IWG1 891 aa24.03■■□□□ 1.44
FAM3A-212ENST00000434658 TRPC5Q9UL62 973 aaPredicted RBP24.03■■□□□ 1.44
FAM3A-212ENST00000434658 COL3A1P02461 1466 aaPredicted RBP24.02■■□□□ 1.44
FAM3A-212ENST00000434658 OVOS2A0A0J9YW53 1432 aa24.02■■□□□ 1.44
FAM3A-212ENST00000434658 OVOS2Q6IE36 1432 aa24.02■■□□□ 1.44
FAM3A-212ENST00000434658 PDE4AP27815 886 aa24.02■■□□□ 1.44
FAM3A-212ENST00000434658 BCAR3O75815 825 aa24.01■■□□□ 1.43
FAM3A-212ENST00000434658 BACH2Q9BYV9 841 aa24.01■■□□□ 1.43
FAM3A-212ENST00000434658 ILDR2Q71H61 639 aa24■■□□□ 1.43
FAM3A-212ENST00000434658 IPO9Q96P70 1041 aaKnown RBP24■■□□□ 1.43
FAM3A-212ENST00000434658 NOP58Q9Y2X3 529 aaKnown RBP24■■□□□ 1.43
FAM3A-212ENST00000434658 RXRBP28702 533 aa23.99■■□□□ 1.43
FAM3A-212ENST00000434658 ARHGEF25Q86VW2 580 aa23.99■■□□□ 1.43
FAM3A-212ENST00000434658 NWD2Q9ULI1 1742 aa23.99■■□□□ 1.43
FAM3A-212ENST00000434658 NFAT5O94916 1531 aa23.98■■□□□ 1.43
FAM3A-212ENST00000434658 ATRNO75882 1429 aa23.98■■□□□ 1.43
FAM3A-212ENST00000434658 PDE3AQ14432 1141 aa23.98■■□□□ 1.43
FAM3A-212ENST00000434658 RRP7AQ9Y3A4 280 aaKnown RBP23.97■■□□□ 1.43
FAM3A-212ENST00000434658 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.97■■□□□ 1.43
FAM3A-212ENST00000434658 RBM6P78332 1123 aaKnown RBP23.96■■□□□ 1.43
FAM3A-212ENST00000434658 AATKQ6ZMQ8 1374 aa23.96■■□□□ 1.43
FAM3A-212ENST00000434658 U2AF1L5P0DN76 240 aaPredicted RBP23.96■■□□□ 1.43
FAM3A-212ENST00000434658 U2AF1Q01081 240 aaKnown RBP eCLIP23.96■■□□□ 1.43
FAM3A-212ENST00000434658 NEUROD2Q15784 382 aa23.96■■□□□ 1.43
FAM3A-212ENST00000434658 EVA1CP58658 441 aa23.95■■□□□ 1.42
FAM3A-212ENST00000434658 VPS72Q15906 364 aa23.95■■□□□ 1.42
FAM3A-212ENST00000434658 GJD4Q96KN9 370 aaPredicted RBP23.95■■□□□ 1.42
FAM3A-212ENST00000434658 STRN4Q9NRL3 753 aa23.95■■□□□ 1.42
FAM3A-212ENST00000434658 FBLN1P23142 703 aa23.94■■□□□ 1.42
FAM3A-212ENST00000434658 CCDC9Q9Y3X0 531 aaKnown RBP23.94■■□□□ 1.42
FAM3A-212ENST00000434658 CAMTA1Q9Y6Y1 1673 aa23.94■■□□□ 1.42
FAM3A-212ENST00000434658 NRAPQ86VF7 1730 aa23.93■■□□□ 1.42
FAM3A-212ENST00000434658 LMO7Q8WWI1 1683 aa23.93■■□□□ 1.42
FAM3A-212ENST00000434658 AXIN2Q9Y2T1 843 aa23.93■■□□□ 1.42
FAM3A-212ENST00000434658 COL18A1P39060 1754 aa23.91■■□□□ 1.42
FAM3A-212ENST00000434658 RARSP54136 660 aaKnown RBP23.9■■□□□ 1.42
FAM3A-212ENST00000434658 SKAP1Q86WV1 359 aa23.89■■□□□ 1.42
FAM3A-212ENST00000434658 PLEKHF1Q96S99 279 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms