RNA–Protein interactions for RNA: ENST00000434600.6

LAMP2-203, Transcript of lysosomal associated membrane protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMP2, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP2-203ENST00000434600 ALS2Q96Q42 1657 aa18.27■□□□□ 0.52
LAMP2-203ENST00000434600 NHSL1Q5SYE7 1610 aa18.27■□□□□ 0.52
LAMP2-203ENST00000434600 SPATA31A3Q5VYP0 1347 aa18.27■□□□□ 0.52
LAMP2-203ENST00000434600 TNS3Q68CZ2 1445 aa18.27■□□□□ 0.52
LAMP2-203ENST00000434600 SBNO1A3KN83 1393 aa18.27■□□□□ 0.51
LAMP2-203ENST00000434600 NGEFQ8N5V2 710 aa18.26■□□□□ 0.51
LAMP2-203ENST00000434600 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.26■□□□□ 0.51
LAMP2-203ENST00000434600 CABLES1Q8TDN4 633 aa18.26■□□□□ 0.51
LAMP2-203ENST00000434600 SLFN5Q08AF3 891 aa18.26■□□□□ 0.51
LAMP2-203ENST00000434600 AATKQ6ZMQ8 1374 aa18.25■□□□□ 0.51
LAMP2-203ENST00000434600 TRMT2AQ8IZ69 625 aaKnown RBP18.25■□□□□ 0.51
LAMP2-203ENST00000434600 USP54Q70EL1 1684 aa18.24■□□□□ 0.51
LAMP2-203ENST00000434600 MAP3K19Q56UN5 1328 aa18.23■□□□□ 0.51
LAMP2-203ENST00000434600 MED1Q15648 1581 aaPredicted RBP18.23■□□□□ 0.51
LAMP2-203ENST00000434600 ZBTB7CA1YPR0 619 aa18.22■□□□□ 0.51
LAMP2-203ENST00000434600 GCP02774 474 aa18.22■□□□□ 0.51
LAMP2-203ENST00000434600 USP19O94966 1318 aa18.22■□□□□ 0.51
LAMP2-203ENST00000434600 IQSEC2Q5JU85 1478 aa18.21■□□□□ 0.51
LAMP2-203ENST00000434600 C20orf194Q5TEA3 1177 aa18.21■□□□□ 0.51
LAMP2-203ENST00000434600 KDM2BQ8NHM5 1336 aa18.21■□□□□ 0.51
LAMP2-203ENST00000434600 PEAK1Q9H792 1746 aa18.21■□□□□ 0.51
LAMP2-203ENST00000434600 CENPQQ7L2Z9 268 aaPredicted RBP18.21■□□□□ 0.51
LAMP2-203ENST00000434600 NFAT5O94916 1531 aa18.2■□□□□ 0.5
LAMP2-203ENST00000434600 CFAP53Q96M91 514 aa18.2■□□□□ 0.5
LAMP2-203ENST00000434600 AHDC1Q5TGY3 1603 aaPredicted RBP18.2■□□□□ 0.5
LAMP2-203ENST00000434600 COL3A1P02461 1466 aaPredicted RBP18.2■□□□□ 0.5
LAMP2-203ENST00000434600 HSP90AB2PQ58FF8 381 aa18.19■□□□□ 0.5
LAMP2-203ENST00000434600 BCL11AQ9H165 835 aa18.19■□□□□ 0.5
LAMP2-203ENST00000434600 ARHGEF10O15013 1369 aa18.19■□□□□ 0.5
LAMP2-203ENST00000434600 SLIT3O75094 1523 aa18.19■□□□□ 0.5
LAMP2-203ENST00000434600 ZC3H6P61129 1189 aaKnown RBP18.19■□□□□ 0.5
LAMP2-203ENST00000434600 PNPLA6Q8IY17 1366 aa18.19■□□□□ 0.5
LAMP2-203ENST00000434600 SHPRHQ149N8 1683 aa18.19■□□□□ 0.5
LAMP2-203ENST00000434600 E9PSI1 815 aa18.18■□□□□ 0.5
LAMP2-203ENST00000434600 APAF1O14727 1248 aa18.18■□□□□ 0.5
LAMP2-203ENST00000434600 AMPHP49418 695 aa18.18■□□□□ 0.5
LAMP2-203ENST00000434600 KCNH5Q8NCM2 988 aa18.18■□□□□ 0.5
LAMP2-203ENST00000434600 PHLPP1O60346 1717 aa18.17■□□□□ 0.5
LAMP2-203ENST00000434600 CDK12Q9NYV4 1490 aaPredicted RBP18.17■□□□□ 0.5
LAMP2-203ENST00000434600 CCDC146Q8IYE0 955 aa18.16■□□□□ 0.5
LAMP2-203ENST00000434600 LRRC59Q96AG4 307 aaKnown RBP18.16■□□□□ 0.5
LAMP2-203ENST00000434600 LTN1O94822 1766 aa18.16■□□□□ 0.5
LAMP2-203ENST00000434600 PHRF1Q9P1Y6 1649 aaKnown RBP18.16■□□□□ 0.5
LAMP2-203ENST00000434600 U2SURPO15042 1029 aaKnown RBP18.16■□□□□ 0.5
LAMP2-203ENST00000434600 DIAPH1O60610 1272 aaKnown RBP18.16■□□□□ 0.5
LAMP2-203ENST00000434600 NPM2Q86SE8 214 aaKnown RBP18.16■□□□□ 0.5
LAMP2-203ENST00000434600 CRYBG1Q9Y4K1 1723 aa18.15■□□□□ 0.5
LAMP2-203ENST00000434600 NBR1Q14596 966 aa18.15■□□□□ 0.5
LAMP2-203ENST00000434600 COL16A1Q07092 1604 aaPredicted RBP18.15■□□□□ 0.5
LAMP2-203ENST00000434600 HOXC9P31274 260 aa18.14■□□□□ 0.5
LAMP2-203ENST00000434600 DEKP35659 375 aaKnown RBP18.14■□□□□ 0.5
LAMP2-203ENST00000434600 ARHGEF25Q86VW2 580 aa18.14■□□□□ 0.5
LAMP2-203ENST00000434600 FLT4P35916 1363 aa18.14■□□□□ 0.49
LAMP2-203ENST00000434600 EIF4A2Q14240 407 aaKnown RBP18.13■□□□□ 0.49
LAMP2-203ENST00000434600 U2AF1L5P0DN76 240 aaPredicted RBP18.13■□□□□ 0.49
LAMP2-203ENST00000434600 IL13P35225 146 aa18.13■□□□□ 0.49
LAMP2-203ENST00000434600 HAP1P54257 671 aaPredicted RBP18.13■□□□□ 0.49
LAMP2-203ENST00000434600 U2AF1Q01081 240 aaKnown RBP eCLIP18.13■□□□□ 0.496e-6■■■■□ 22.1
LAMP2-203ENST00000434600 LTV1Q96GA3 475 aaPredicted RBP18.13■□□□□ 0.49
LAMP2-203ENST00000434600 CHRNA2Q15822 529 aa18.12■□□□□ 0.49
LAMP2-203ENST00000434600 DDRGK1Q96HY6 314 aa18.12■□□□□ 0.49
LAMP2-203ENST00000434600 SPINK5Q9NQ38 1064 aaPredicted RBP18.11■□□□□ 0.49
LAMP2-203ENST00000434600 AXIN2Q9Y2T1 843 aa18.11■□□□□ 0.49
LAMP2-203ENST00000434600 KIAA0232Q92628 1395 aa18.11■□□□□ 0.49
LAMP2-203ENST00000434600 RTL5Q5HYW3 569 aaPredicted RBP18.11■□□□□ 0.49
LAMP2-203ENST00000434600 ABCA3Q99758 1704 aa18.1■□□□□ 0.49
LAMP2-203ENST00000434600 IP6K1Q92551 441 aa18.1■□□□□ 0.49
LAMP2-203ENST00000434600 HMOX1P09601 288 aa18.1■□□□□ 0.49
LAMP2-203ENST00000434600 RTL1A6NKG5 1358 aa18.08■□□□□ 0.48
LAMP2-203ENST00000434600 KIF24Q5T7B8 1368 aa18.07■□□□□ 0.48
LAMP2-203ENST00000434600 RGPD5Q99666 1765 aa18.07■□□□□ 0.48
LAMP2-203ENST00000434600 HSPA1LP34931 641 aa18.07■□□□□ 0.48
LAMP2-203ENST00000434600 PDE3AQ14432 1141 aa18.07■□□□□ 0.48
LAMP2-203ENST00000434600 AEBP1Q8IUX7 1158 aa18.07■□□□□ 0.48
LAMP2-203ENST00000434600 WWC1Q8IX03 1113 aa18.07■□□□□ 0.48
LAMP2-203ENST00000434600 FAM161AQ3B820 660 aa18.06■□□□□ 0.48
LAMP2-203ENST00000434600 SKAP1Q86WV1 359 aa18.06■□□□□ 0.48
LAMP2-203ENST00000434600 PRDM11Q9NQV5 511 aa18.06■□□□□ 0.48
LAMP2-203ENST00000434600 BCAR3O75815 825 aa18.05■□□□□ 0.48
LAMP2-203ENST00000434600 USP35Q9P2H5 1018 aa18.05■□□□□ 0.48
LAMP2-203ENST00000434600 NUTM2BA6NNL0 878 aaPredicted RBP18.05■□□□□ 0.48
LAMP2-203ENST00000434600 NUTM2EB1AL46 878 aaPredicted RBP18.05■□□□□ 0.48
LAMP2-203ENST00000434600 NUTM2AQ8IVF1 878 aaPredicted RBP18.05■□□□□ 0.48
LAMP2-203ENST00000434600 RUNDC1Q96C34 613 aa18.05■□□□□ 0.48
LAMP2-203ENST00000434600 EYA1Q99502 592 aa18.05■□□□□ 0.48
LAMP2-203ENST00000434600 COL22A1Q8NFW1 1626 aaPredicted RBP18.05■□□□□ 0.48
LAMP2-203ENST00000434600 CPDO75976 1380 aa18.04■□□□□ 0.48
LAMP2-203ENST00000434600 NCBP3Q53F19 620 aaKnown RBP18.04■□□□□ 0.48
LAMP2-203ENST00000434600 USHBP1Q8N6Y0 703 aa18.04■□□□□ 0.48
LAMP2-203ENST00000434600 COL18A1P39060 1754 aa18.03■□□□□ 0.48
LAMP2-203ENST00000434600 SULT6B1Q6IMI4 303 aa18.03■□□□□ 0.48
LAMP2-203ENST00000434600 ANKRD24Q8TF21 1146 aa18.03■□□□□ 0.48
LAMP2-203ENST00000434600 FAM83GA6ND36 823 aa18.03■□□□□ 0.48
LAMP2-203ENST00000434600 ADAMTS2O95450 1211 aa18.03■□□□□ 0.48
LAMP2-203ENST00000434600 RSPH6AQ9H0K4 717 aa18.03■□□□□ 0.48
LAMP2-203ENST00000434600 PRKAR2BP31323 418 aa18.02■□□□□ 0.48
LAMP2-203ENST00000434600 RGPD2P0DJD1 1756 aa18.02■□□□□ 0.47
LAMP2-203ENST00000434600 RGPD1P0DJD0 1748 aa18.02■□□□□ 0.47
LAMP2-203ENST00000434600 NBPF6Q5VWK0 638 aa18.02■□□□□ 0.47
LAMP2-203ENST00000434600 NBPF4Q96M43 638 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms