RNA–Protein interactions for RNA: ENST00000434081.1

LINC00163-201, long intergenic non-protein coding RNA 163, humanhuman

TSL 1 (best) BASIC

Gene LINC00163, Length 2,155 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00163-201ENST00000434081 COG3Q96JB2 828 aa18.82■□□□□ 0.6
LINC00163-201ENST00000434081 C3P01024 1663 aa18.82■□□□□ 0.6
LINC00163-201ENST00000434081 CALD1Q05682 793 aaKnown RBP18.81■□□□□ 0.6
LINC00163-201ENST00000434081 ZNF428Q96B54 188 aa18.81■□□□□ 0.6
LINC00163-201ENST00000434081 ZNF692Q9BU19 519 aaPredicted RBP18.81■□□□□ 0.6
LINC00163-201ENST00000434081 ZBTB40Q9NUA8 1239 aa18.81■□□□□ 0.6
LINC00163-201ENST00000434081 SLIT1O75093 1534 aa18.81■□□□□ 0.6
LINC00163-201ENST00000434081 PRR36Q9H6K5 1346 aa18.81■□□□□ 0.6
LINC00163-201ENST00000434081 UPF2Q9HAU5 1272 aaKnown RBP18.81■□□□□ 0.6
LINC00163-201ENST00000434081 ARHGAP23Q9P227 1491 aa18.8■□□□□ 0.6
LINC00163-201ENST00000434081 THUMPD2Q9BTF0 503 aaKnown RBP18.8■□□□□ 0.6
LINC00163-201ENST00000434081 AKAP12Q02952 1782 aa18.79■□□□□ 0.6
LINC00163-201ENST00000434081 BRPF1P55201 1214 aaPredicted RBP18.79■□□□□ 0.6
LINC00163-201ENST00000434081 ITSN1Q15811 1721 aa18.79■□□□□ 0.6
LINC00163-201ENST00000434081 RRS1Q15050 365 aaKnown RBP18.78■□□□□ 0.6
LINC00163-201ENST00000434081 MAP2P11137 1827 aaKnown RBP18.78■□□□□ 0.6
LINC00163-201ENST00000434081 SMC5Q8IY18 1101 aa18.78■□□□□ 0.6
LINC00163-201ENST00000434081 TBC1D32Q96NH3 1257 aa18.78■□□□□ 0.6
LINC00163-201ENST00000434081 IFT57Q9NWB7 429 aa18.78■□□□□ 0.6
LINC00163-201ENST00000434081 FER1L4A9Z1Z3 1794 aa18.78■□□□□ 0.6
LINC00163-201ENST00000434081 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.77■□□□□ 0.6
LINC00163-201ENST00000434081 GNAI1P63096 354 aa18.77■□□□□ 0.6
LINC00163-201ENST00000434081 BECN1Q14457 450 aa18.77■□□□□ 0.6
LINC00163-201ENST00000434081 PTPRUQ92729 1446 aa18.77■□□□□ 0.59
LINC00163-201ENST00000434081 VAMP4O75379 141 aa18.76■□□□□ 0.59
LINC00163-201ENST00000434081 SLC26A8Q96RN1 970 aa18.76■□□□□ 0.59
LINC00163-201ENST00000434081 ZNF853P0CG23 659 aa18.75■□□□□ 0.59
LINC00163-201ENST00000434081 LMOD3Q0VAK6 560 aa18.75■□□□□ 0.59
LINC00163-201ENST00000434081 TSPYL6Q8N831 410 aa18.75■□□□□ 0.59
LINC00163-201ENST00000434081 MBIPQ9NS73 344 aa18.75■□□□□ 0.59
LINC00163-201ENST00000434081 TBX22Q9Y458 520 aa18.75■□□□□ 0.59
LINC00163-201ENST00000434081 TOPAZ1Q8N9V7 1692 aa18.75■□□□□ 0.59
LINC00163-201ENST00000434081 THEMISQ8N1K5 641 aaPredicted RBP18.74■□□□□ 0.59
LINC00163-201ENST00000434081 PLEKHG3A1L390 1219 aa18.74■□□□□ 0.59
LINC00163-201ENST00000434081 MRPL50Q8N5N7 158 aaKnown RBP18.74■□□□□ 0.59
LINC00163-201ENST00000434081 ARHGAP45Q92619 1136 aa18.73■□□□□ 0.59
LINC00163-201ENST00000434081 PTCH1Q13635 1447 aa18.72■□□□□ 0.59
LINC00163-201ENST00000434081 DIP2AQ14689 1571 aa18.72■□□□□ 0.59
LINC00163-201ENST00000434081 CFAP44Q96MT7 982 aa18.72■□□□□ 0.59
LINC00163-201ENST00000434081 AMOTL2Q9Y2J4 779 aa18.72■□□□□ 0.59
LINC00163-201ENST00000434081 ACEP12821 1306 aa18.72■□□□□ 0.59
LINC00163-201ENST00000434081 NRKQ7Z2Y5 1582 aa18.72■□□□□ 0.59
LINC00163-201ENST00000434081 TTC21BQ7Z4L5 1316 aa18.71■□□□□ 0.59
LINC00163-201ENST00000434081 ELL2O00472 640 aaPredicted RBP18.71■□□□□ 0.59
LINC00163-201ENST00000434081 FRAT2O75474 233 aaPredicted RBP18.71■□□□□ 0.59
LINC00163-201ENST00000434081 TRHP20396 242 aaPredicted RBP18.71■□□□□ 0.59
LINC00163-201ENST00000434081 ZBTB7BO15156 539 aaPredicted RBP18.7■□□□□ 0.58
LINC00163-201ENST00000434081 NUCB1Q02818 461 aa18.7■□□□□ 0.58
LINC00163-201ENST00000434081 TWISTNBQ3B726 338 aaPredicted RBP18.7■□□□□ 0.58
LINC00163-201ENST00000434081 PIK3R4Q99570 1358 aa18.7■□□□□ 0.58
LINC00163-201ENST00000434081 FAM83GA6ND36 823 aa18.69■□□□□ 0.58
LINC00163-201ENST00000434081 CHMP4BQ9H444 224 aaKnown RBP18.69■□□□□ 0.58
LINC00163-201ENST00000434081 USP6P35125 1406 aa18.69■□□□□ 0.58
LINC00163-201ENST00000434081 GSE1Q14687 1217 aa18.69■□□□□ 0.58
LINC00163-201ENST00000434081 C8orf58Q8NAV2 365 aa18.68■□□□□ 0.58
LINC00163-201ENST00000434081 OVOS2A0A0J9YW53 1432 aa18.68■□□□□ 0.58
LINC00163-201ENST00000434081 OVOS2Q6IE36 1432 aa18.68■□□□□ 0.58
LINC00163-201ENST00000434081 ABCC4O15439 1325 aa18.67■□□□□ 0.58
LINC00163-201ENST00000434081 NUTM2FA1L443 756 aa18.67■□□□□ 0.58
LINC00163-201ENST00000434081 EIF4A2Q14240 407 aaKnown RBP18.67■□□□□ 0.58
LINC00163-201ENST00000434081 DCTN1Q14203 1278 aa18.66■□□□□ 0.58
LINC00163-201ENST00000434081 CHD1LQ86WJ1 897 aa18.66■□□□□ 0.58
LINC00163-201ENST00000434081 TBC1D2Q9BYX2 928 aa18.66■□□□□ 0.58
LINC00163-201ENST00000434081 MFAP1P55081 439 aaKnown RBP18.66■□□□□ 0.58
LINC00163-201ENST00000434081 AEBP1Q8IUX7 1158 aa18.66■□□□□ 0.58
LINC00163-201ENST00000434081 C22orf23Q9BZE7 217 aa18.66■□□□□ 0.58
LINC00163-201ENST00000434081 LNPKQ9C0E8 428 aa18.66■□□□□ 0.58
LINC00163-201ENST00000434081 SULT6B1Q6IMI4 303 aa18.65■□□□□ 0.58
LINC00163-201ENST00000434081 SLKQ9H2G2 1235 aaPredicted RBP18.65■□□□□ 0.58
LINC00163-201ENST00000434081 SSH2Q76I76 1423 aa18.65■□□□□ 0.58
LINC00163-201ENST00000434081 C1orf115Q9H7X2 142 aa18.64■□□□□ 0.57
LINC00163-201ENST00000434081 XRN1Q8IZH2 1706 aaKnown RBP18.64■□□□□ 0.57
LINC00163-201ENST00000434081 GCC1Q96CN9 775 aa18.64■□□□□ 0.57
LINC00163-201ENST00000434081 ANTXR1Q9H6X2 564 aa18.64■□□□□ 0.57
LINC00163-201ENST00000434081 API5Q9BZZ5 524 aaKnown RBP18.63■□□□□ 0.57
LINC00163-201ENST00000434081 USP31Q70CQ4 1352 aa18.63■□□□□ 0.57
LINC00163-201ENST00000434081 TTC21AQ8NDW8 1320 aa18.63■□□□□ 0.57
LINC00163-201ENST00000434081 NALCNQ8IZF0 1738 aa18.62■□□□□ 0.57
LINC00163-201ENST00000434081 CEP170BQ9Y4F5 1589 aaPredicted RBP18.62■□□□□ 0.57
LINC00163-201ENST00000434081 HSP90AB2PQ58FF8 381 aa18.61■□□□□ 0.57
LINC00163-201ENST00000434081 ANKRD45Q5TZF3 282 aa18.61■□□□□ 0.57
LINC00163-201ENST00000434081 DLG5Q8TDM6 1919 aa18.61■□□□□ 0.57
LINC00163-201ENST00000434081 SIRT2Q8IXJ6 389 aa18.6■□□□□ 0.57
LINC00163-201ENST00000434081 BMP2KLQ5H9B9 411 aa18.59■□□□□ 0.57
LINC00163-201ENST00000434081 ANKARQ7Z5J8 1434 aa18.58■□□□□ 0.57
LINC00163-201ENST00000434081 NGDNQ8NEJ9 315 aaKnown RBP18.58■□□□□ 0.57
LINC00163-201ENST00000434081 CHL1O00533 1208 aa18.58■□□□□ 0.56
LINC00163-201ENST00000434081 MCM10Q7L590 875 aa18.58■□□□□ 0.56
LINC00163-201ENST00000434081 RIMS1Q86UR5 1692 aaKnown RBP18.57■□□□□ 0.56
LINC00163-201ENST00000434081 SOX12O15370 315 aa18.57■□□□□ 0.56
LINC00163-201ENST00000434081 HAP1P54257 671 aaPredicted RBP18.57■□□□□ 0.56
LINC00163-201ENST00000434081 KIF24Q5T7B8 1368 aa18.57■□□□□ 0.56
LINC00163-201ENST00000434081 KCNA6P17658 529 aa18.57■□□□□ 0.56
LINC00163-201ENST00000434081 PEAK1Q9H792 1746 aa18.56■□□□□ 0.56
LINC00163-201ENST00000434081 KRT24Q2M2I5 525 aa18.56■□□□□ 0.56
LINC00163-201ENST00000434081 RBM25P49756 843 aaKnown RBP18.55■□□□□ 0.56
LINC00163-201ENST00000434081 INTS3Q68E01 1043 aaKnown RBP18.54■□□□□ 0.56
LINC00163-201ENST00000434081 MAP3K19Q56UN5 1328 aa18.54■□□□□ 0.56
LINC00163-201ENST00000434081 KIAA0232Q92628 1395 aa18.54■□□□□ 0.56
LINC00163-201ENST00000434081 RGPD1P0DJD0 1748 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms