RNA–Protein interactions for RNA: ENST00000433753.4

SEMA3B-204, Transcript of semaphorin 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-204ENST00000433753 ESF1Q9H501 851 aaKnown RBP21.9■■□□□ 1.1
SEMA3B-204ENST00000433753 RIMBP3CA6NJZ7 1639 aa21.9■■□□□ 1.1
SEMA3B-204ENST00000433753 RIMBP3BA6NNM3 1639 aa21.9■■□□□ 1.1
SEMA3B-204ENST00000433753 RIMBP3Q9UFD9 1639 aa21.9■■□□□ 1.1
SEMA3B-204ENST00000433753 EDC4Q6P2E9 1401 aaKnown RBP21.9■■□□□ 1.1
SEMA3B-204ENST00000433753 ANKRD45Q5TZF3 282 aa21.9■■□□□ 1.1
SEMA3B-204ENST00000433753 PPP6R1Q9UPN7 881 aa21.9■■□□□ 1.1
SEMA3B-204ENST00000433753 DLC1Q96QB1 1528 aa21.9■■□□□ 1.1
SEMA3B-204ENST00000433753 GNAI1P63096 354 aa21.89■■□□□ 1.1
SEMA3B-204ENST00000433753 TWISTNBQ3B726 338 aaPredicted RBP21.89■■□□□ 1.1
SEMA3B-204ENST00000433753 CHD1LQ86WJ1 897 aa21.89■■□□□ 1.1
SEMA3B-204ENST00000433753 SETD1AO15047 1707 aaKnown RBP21.89■■□□□ 1.09
SEMA3B-204ENST00000433753 AEBP1Q8IUX7 1158 aa21.89■■□□□ 1.09
SEMA3B-204ENST00000433753 CDC42BPGQ6DT37 1551 aa21.89■■□□□ 1.09
SEMA3B-204ENST00000433753 SPATA31D1Q6ZQQ2 1576 aa21.89■■□□□ 1.09
SEMA3B-204ENST00000433753 PRR36Q9H6K5 1346 aa21.89■■□□□ 1.09
SEMA3B-204ENST00000433753 SOX12O15370 315 aa21.88■■□□□ 1.09
SEMA3B-204ENST00000433753 IFT57Q9NWB7 429 aa21.88■■□□□ 1.09
SEMA3B-204ENST00000433753 ZNF853P0CG23 659 aa21.87■■□□□ 1.09
SEMA3B-204ENST00000433753 KRT24Q2M2I5 525 aa21.87■■□□□ 1.09
SEMA3B-204ENST00000433753 SIRT2Q8IXJ6 389 aa21.87■■□□□ 1.09
SEMA3B-204ENST00000433753 NRXN3Q9Y4C0 1643 aa21.86■■□□□ 1.09
SEMA3B-204ENST00000433753 AGLP35573 1532 aa21.85■■□□□ 1.09
SEMA3B-204ENST00000433753 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.85■■□□□ 1.09
SEMA3B-204ENST00000433753 CFAP44Q96MT7 982 aa21.85■■□□□ 1.09
SEMA3B-204ENST00000433753 BRPF1P55201 1214 aaPredicted RBP21.84■■□□□ 1.09
SEMA3B-204ENST00000433753 CALD1Q05682 793 aaKnown RBP21.84■■□□□ 1.09
SEMA3B-204ENST00000433753 SULT6B1Q6IMI4 303 aa21.83■■□□□ 1.09
SEMA3B-204ENST00000433753 ZNF428Q96B54 188 aa21.83■■□□□ 1.09
SEMA3B-204ENST00000433753 CDK12Q9NYV4 1490 aaPredicted RBP21.82■■□□□ 1.08
SEMA3B-204ENST00000433753 EIF4A2Q14240 407 aaKnown RBP21.81■■□□□ 1.08
SEMA3B-204ENST00000433753 ARHGAP45Q92619 1136 aa21.81■■□□□ 1.08
SEMA3B-204ENST00000433753 AATKQ6ZMQ8 1374 aa21.81■■□□□ 1.08
SEMA3B-204ENST00000433753 ROBO2Q9HCK4 1378 aa21.81■■□□□ 1.08
SEMA3B-204ENST00000433753 PLPPR3Q6T4P5 718 aa21.81■■□□□ 1.08
SEMA3B-204ENST00000433753 MCM10Q7L590 875 aa21.81■■□□□ 1.08
SEMA3B-204ENST00000433753 ARXQ96QS3 562 aa21.8■■□□□ 1.08
SEMA3B-204ENST00000433753 DLG5Q8TDM6 1919 aa21.8■■□□□ 1.08
SEMA3B-204ENST00000433753 HSP90AB2PQ58FF8 381 aa21.79■■□□□ 1.08
SEMA3B-204ENST00000433753 ABCC4O15439 1325 aa21.79■■□□□ 1.08
SEMA3B-204ENST00000433753 REREQ9P2R6 1566 aa21.78■■□□□ 1.08
SEMA3B-204ENST00000433753 PTCH1Q13635 1447 aa21.78■■□□□ 1.08
SEMA3B-204ENST00000433753 ACEP12821 1306 aa21.78■■□□□ 1.08
SEMA3B-204ENST00000433753 SLC26A8Q96RN1 970 aa21.77■■□□□ 1.08
SEMA3B-204ENST00000433753 LMOD3Q0VAK6 560 aa21.77■■□□□ 1.08
SEMA3B-204ENST00000433753 ZNF692Q9BU19 519 aaPredicted RBP21.77■■□□□ 1.08
SEMA3B-204ENST00000433753 GCC1Q96CN9 775 aa21.76■■□□□ 1.07
SEMA3B-204ENST00000433753 MIS18AQ9NYP9 233 aa21.76■■□□□ 1.07
SEMA3B-204ENST00000433753 TTC21BQ7Z4L5 1316 aa21.76■■□□□ 1.07
SEMA3B-204ENST00000433753 LTKP29376 864 aa21.76■■□□□ 1.07
SEMA3B-204ENST00000433753 PIK3R4Q99570 1358 aa21.76■■□□□ 1.07
SEMA3B-204ENST00000433753 BMP2KLQ5H9B9 411 aa21.76■■□□□ 1.07
SEMA3B-204ENST00000433753 GZF1Q9H116 711 aaPredicted RBP21.76■■□□□ 1.07
SEMA3B-204ENST00000433753 CEBPAP49715 358 aaPredicted RBP21.75■■□□□ 1.07
SEMA3B-204ENST00000433753 HSCBQ8IWL3 235 aa21.75■■□□□ 1.07
SEMA3B-204ENST00000433753 HDGFP51858 240 aaKnown RBP21.75■■□□□ 1.07
SEMA3B-204ENST00000433753 TNRQ92752 1358 aa21.74■■□□□ 1.07
SEMA3B-204ENST00000433753 TBC1D9Q6ZT07 1266 aa21.73■■□□□ 1.07
SEMA3B-204ENST00000433753 MCM4P33991 863 aa21.73■■□□□ 1.07
SEMA3B-204ENST00000433753 RBM25P49756 843 aaKnown RBP21.73■■□□□ 1.07
SEMA3B-204ENST00000433753 C16orf71Q8IYS4 520 aaPredicted RBP21.73■■□□□ 1.07
SEMA3B-204ENST00000433753 API5Q9BZZ5 524 aaKnown RBP21.73■■□□□ 1.07
SEMA3B-204ENST00000433753 TMEM2Q9UHN6 1383 aa21.72■■□□□ 1.07
SEMA3B-204ENST00000433753 FOXO3O43524 673 aa21.72■■□□□ 1.07
SEMA3B-204ENST00000433753 RBM42Q9BTD8 480 aaKnown RBP21.72■■□□□ 1.07
SEMA3B-204ENST00000433753 FOXD4L1Q9NU39 408 aa21.72■■□□□ 1.07
SEMA3B-204ENST00000433753 CHMP5Q9NZZ3 219 aa21.72■■□□□ 1.07
SEMA3B-204ENST00000433753 APBB1O00213 710 aa21.71■■□□□ 1.07
SEMA3B-204ENST00000433753 MON2Q7Z3U7 1717 aa21.71■■□□□ 1.07
SEMA3B-204ENST00000433753 SIRT1Q96EB6 747 aa21.71■■□□□ 1.07
SEMA3B-204ENST00000433753 CD2BP2O95400 341 aaKnown RBP21.71■■□□□ 1.07
SEMA3B-204ENST00000433753 KIF2CQ99661 725 aa21.71■■□□□ 1.07
SEMA3B-204ENST00000433753 CHMP4BQ9H444 224 aaKnown RBP21.71■■□□□ 1.07
SEMA3B-204ENST00000433753 TECPR2O15040 1411 aa21.7■■□□□ 1.06
SEMA3B-204ENST00000433753 C3P01024 1663 aa21.7■■□□□ 1.06
SEMA3B-204ENST00000433753 CHL1O00533 1208 aa21.68■■□□□ 1.06
SEMA3B-204ENST00000433753 GSPT1P15170 499 aaKnown RBP21.68■■□□□ 1.06
SEMA3B-204ENST00000433753 ANO8Q9HCE9 1232 aaPredicted RBP21.68■■□□□ 1.06
SEMA3B-204ENST00000433753 ADAMTS13Q76LX8 1427 aa21.68■■□□□ 1.06
SEMA3B-204ENST00000433753 OTUD7AQ8TE49 926 aaPredicted RBP21.68■■□□□ 1.06
SEMA3B-204ENST00000433753 AKAP12Q02952 1782 aa21.67■■□□□ 1.06
SEMA3B-204ENST00000433753 ITSN1Q15811 1721 aa21.67■■□□□ 1.06
SEMA3B-204ENST00000433753 PLEKHM2Q8IWE5 1019 aa21.66■■□□□ 1.06
SEMA3B-204ENST00000433753 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.66■■□□□ 1.06
SEMA3B-204ENST00000433753 SMARCA5O60264 1052 aaPredicted RBP21.65■■□□□ 1.06
SEMA3B-204ENST00000433753 HSP90AB1P08238 724 aaKnown RBP21.65■■□□□ 1.06
SEMA3B-204ENST00000433753 KNDC1Q76NI1 1749 aa21.65■■□□□ 1.06
SEMA3B-204ENST00000433753 PLEKHG3A1L390 1219 aa21.65■■□□□ 1.06
SEMA3B-204ENST00000433753 SLC4A2P04920 1241 aa21.65■■□□□ 1.06
SEMA3B-204ENST00000433753 INTS3Q68E01 1043 aaKnown RBP21.65■■□□□ 1.06
SEMA3B-204ENST00000433753 MEIS3Q99687 375 aa21.65■■□□□ 1.06
SEMA3B-204ENST00000433753 DCTPP1Q9H773 170 aa21.65■■□□□ 1.06
SEMA3B-204ENST00000433753 MAP3K19Q56UN5 1328 aa21.64■■□□□ 1.05
SEMA3B-204ENST00000433753 MTHFSDQ2M296 383 aaKnown RBP21.63■■□□□ 1.05
SEMA3B-204ENST00000433753 USP6P35125 1406 aa21.63■■□□□ 1.05
SEMA3B-204ENST00000433753 F6X3S4 739 aa21.63■■□□□ 1.05
SEMA3B-204ENST00000433753 TRAK2O60296 914 aa21.63■■□□□ 1.05
SEMA3B-204ENST00000433753 SNX21Q969T3 373 aa21.63■■□□□ 1.05
SEMA3B-204ENST00000433753 OVOS2A0A0J9YW53 1432 aa21.62■■□□□ 1.05
SEMA3B-204ENST00000433753 OVOS2Q6IE36 1432 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms