RNA–Protein interactions for RNA: ENST00000433642.2

BLOC1S3-201, Transcript of biogenesis of lysosomal organelles complex 1 subunit 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene BLOC1S3, Length 2,601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S3-201ENST00000433642 NCKAP5LQ9HCH0 1330 aa23.69■■□□□ 1.38
BLOC1S3-201ENST00000433642 EDC4Q6P2E9 1401 aaKnown RBP23.69■■□□□ 1.38
BLOC1S3-201ENST00000433642 ZBTB7BO15156 539 aaPredicted RBP23.68■■□□□ 1.38
BLOC1S3-201ENST00000433642 AGLP35573 1532 aa23.68■■□□□ 1.38
BLOC1S3-201ENST00000433642 METP08581 1390 aa23.68■■□□□ 1.38
BLOC1S3-201ENST00000433642 ELL2O00472 640 aaPredicted RBP23.68■■□□□ 1.38
BLOC1S3-201ENST00000433642 TSPOAP1O95153 1857 aa23.68■■□□□ 1.38
BLOC1S3-201ENST00000433642 NRXN3Q9Y4C0 1643 aa23.68■■□□□ 1.38
BLOC1S3-201ENST00000433642 MLECQ14165 292 aa23.67■■□□□ 1.38
BLOC1S3-201ENST00000433642 CHD1LQ86WJ1 897 aa23.67■■□□□ 1.38
BLOC1S3-201ENST00000433642 MBIPQ9NS73 344 aa23.67■■□□□ 1.38
BLOC1S3-201ENST00000433642 REREQ9P2R6 1566 aa23.67■■□□□ 1.38
BLOC1S3-201ENST00000433642 ZNF853P0CG23 659 aa23.67■■□□□ 1.38
BLOC1S3-201ENST00000433642 C1orf115Q9H7X2 142 aa23.67■■□□□ 1.38
BLOC1S3-201ENST00000433642 PPP6R1Q9UPN7 881 aa23.66■■□□□ 1.38
BLOC1S3-201ENST00000433642 TXNDC2Q86VQ3 553 aa23.66■■□□□ 1.38
BLOC1S3-201ENST00000433642 IFT57Q9NWB7 429 aa23.66■■□□□ 1.38
BLOC1S3-201ENST00000433642 CDK12Q9NYV4 1490 aaPredicted RBP23.66■■□□□ 1.38
BLOC1S3-201ENST00000433642 PTCH1Q13635 1447 aa23.65■■□□□ 1.38
BLOC1S3-201ENST00000433642 GLIPR1L2Q4G1C9 344 aa23.65■■□□□ 1.38
BLOC1S3-201ENST00000433642 CPS1P31327 1500 aa23.65■■□□□ 1.38
BLOC1S3-201ENST00000433642 PIK3R4Q99570 1358 aa23.65■■□□□ 1.38
BLOC1S3-201ENST00000433642 GNAI1P63096 354 aa23.65■■□□□ 1.38
BLOC1S3-201ENST00000433642 DIP2BQ9P265 1576 aa23.65■■□□□ 1.38
BLOC1S3-201ENST00000433642 RRS1Q15050 365 aaKnown RBP23.64■■□□□ 1.38
BLOC1S3-201ENST00000433642 ARHGAP45Q92619 1136 aa23.64■■□□□ 1.37
BLOC1S3-201ENST00000433642 NUDT16Q96DE0 195 aaKnown RBP23.63■■□□□ 1.37
BLOC1S3-201ENST00000433642 DLG5Q8TDM6 1919 aa23.63■■□□□ 1.37
BLOC1S3-201ENST00000433642 CALD1Q05682 793 aaKnown RBP23.63■■□□□ 1.37
BLOC1S3-201ENST00000433642 AATKQ6ZMQ8 1374 aa23.63■■□□□ 1.37
BLOC1S3-201ENST00000433642 RRAGDQ9NQL2 400 aaPredicted RBP23.63■■□□□ 1.37
BLOC1S3-201ENST00000433642 C8orf58Q8NAV2 365 aa23.62■■□□□ 1.37
BLOC1S3-201ENST00000433642 FAM83GA6ND36 823 aa23.62■■□□□ 1.37
BLOC1S3-201ENST00000433642 SIRT2Q8IXJ6 389 aa23.62■■□□□ 1.37
BLOC1S3-201ENST00000433642 ANKRD45Q5TZF3 282 aa23.61■■□□□ 1.37
BLOC1S3-201ENST00000433642 ABCC4O15439 1325 aa23.61■■□□□ 1.37
BLOC1S3-201ENST00000433642 TWISTNBQ3B726 338 aaPredicted RBP23.61■■□□□ 1.37
BLOC1S3-201ENST00000433642 COG3Q96JB2 828 aa23.6■■□□□ 1.37
BLOC1S3-201ENST00000433642 RBM25P49756 843 aaKnown RBP23.6■■□□□ 1.37
BLOC1S3-201ENST00000433642 CFAP44Q96MT7 982 aa23.59■■□□□ 1.37
BLOC1S3-201ENST00000433642 MON2Q7Z3U7 1717 aa23.59■■□□□ 1.37
BLOC1S3-201ENST00000433642 DCTN1Q14203 1278 aa23.59■■□□□ 1.37
BLOC1S3-201ENST00000433642 BMP2KLQ5H9B9 411 aa23.59■■□□□ 1.37
BLOC1S3-201ENST00000433642 CCDC61Q9Y6R9 512 aa23.59■■□□□ 1.37
BLOC1S3-201ENST00000433642 MCM4P33991 863 aa23.58■■□□□ 1.36
BLOC1S3-201ENST00000433642 GCC1Q96CN9 775 aa23.58■■□□□ 1.36
BLOC1S3-201ENST00000433642 CHMP5Q9NZZ3 219 aa23.58■■□□□ 1.36
BLOC1S3-201ENST00000433642 ZNF692Q9BU19 519 aaPredicted RBP23.57■■□□□ 1.36
BLOC1S3-201ENST00000433642 HSCBQ8IWL3 235 aa23.56■■□□□ 1.36
BLOC1S3-201ENST00000433642 PODXL2Q9NZ53 605 aa23.56■■□□□ 1.36
BLOC1S3-201ENST00000433642 PRR36Q9H6K5 1346 aa23.56■■□□□ 1.36
BLOC1S3-201ENST00000433642 C3P01024 1663 aa23.55■■□□□ 1.36
BLOC1S3-201ENST00000433642 LMOD3Q0VAK6 560 aa23.54■■□□□ 1.36
BLOC1S3-201ENST00000433642 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.54■■□□□ 1.36
BLOC1S3-201ENST00000433642 CHMP4BQ9H444 224 aaKnown RBP23.54■■□□□ 1.36
BLOC1S3-201ENST00000433642 AKAP12Q02952 1782 aa23.53■■□□□ 1.36
BLOC1S3-201ENST00000433642 NCOA3Q9Y6Q9 1424 aa23.53■■□□□ 1.36
BLOC1S3-201ENST00000433642 AEBP1Q8IUX7 1158 aa23.53■■□□□ 1.36
BLOC1S3-201ENST00000433642 TECPR2O15040 1411 aa23.52■■□□□ 1.36
BLOC1S3-201ENST00000433642 KIF2CQ99661 725 aa23.52■■□□□ 1.36
BLOC1S3-201ENST00000433642 KNDC1Q76NI1 1749 aa23.52■■□□□ 1.36
BLOC1S3-201ENST00000433642 DDIT3P35638 169 aa23.51■■□□□ 1.35
BLOC1S3-201ENST00000433642 SNX21Q969T3 373 aa23.51■■□□□ 1.35
BLOC1S3-201ENST00000433642 API5Q9BZZ5 524 aaKnown RBP23.5■■□□□ 1.35
BLOC1S3-201ENST00000433642 ITSN1Q15811 1721 aa23.5■■□□□ 1.35
BLOC1S3-201ENST00000433642 TBC1D9Q6ZT07 1266 aa23.5■■□□□ 1.35
BLOC1S3-201ENST00000433642 SIRT1Q96EB6 747 aa23.5■■□□□ 1.35
BLOC1S3-201ENST00000433642 NAP1L5Q96NT1 182 aaPredicted RBP23.49■■□□□ 1.35
BLOC1S3-201ENST00000433642 EIF4A2Q14240 407 aaKnown RBP23.49■■□□□ 1.35
BLOC1S3-201ENST00000433642 KRT24Q2M2I5 525 aa23.49■■□□□ 1.35
BLOC1S3-201ENST00000433642 ARXQ96QS3 562 aa23.48■■□□□ 1.35
BLOC1S3-201ENST00000433642 SULT6B1Q6IMI4 303 aa23.47■■□□□ 1.35
BLOC1S3-201ENST00000433642 GZF1Q9H116 711 aaPredicted RBP23.47■■□□□ 1.35
BLOC1S3-201ENST00000433642 ROBO2Q9HCK4 1378 aa23.47■■□□□ 1.35
BLOC1S3-201ENST00000433642 NRKQ7Z2Y5 1582 aa23.47■■□□□ 1.35
BLOC1S3-201ENST00000433642 CD2BP2O95400 341 aaKnown RBP23.46■■□□□ 1.35
BLOC1S3-201ENST00000433642 HSP90AA2PQ14568 343 aaPredicted RBP23.46■■□□□ 1.35
BLOC1S3-201ENST00000433642 TRAK2O60296 914 aa23.45■■□□□ 1.34
BLOC1S3-201ENST00000433642 L1TD1Q5T7N2 865 aaKnown RBP23.45■■□□□ 1.34
BLOC1S3-201ENST00000433642 TTC21BQ7Z4L5 1316 aa23.44■■□□□ 1.34
BLOC1S3-201ENST00000433642 GSPT1P15170 499 aaKnown RBP23.44■■□□□ 1.34
BLOC1S3-201ENST00000433642 RGS12O14924 1447 aa23.44■■□□□ 1.34
BLOC1S3-201ENST00000433642 MCM10Q7L590 875 aa23.44■■□□□ 1.34
BLOC1S3-201ENST00000433642 FSD2A1L4K1 749 aa23.43■■□□□ 1.34
BLOC1S3-201ENST00000433642 RBM42Q9BTD8 480 aaKnown RBP23.43■■□□□ 1.34
BLOC1S3-201ENST00000433642 KIF24Q5T7B8 1368 aa23.43■■□□□ 1.34
BLOC1S3-201ENST00000433642 NUTM2FA1L443 756 aa23.43■■□□□ 1.34
BLOC1S3-201ENST00000433642 INTS3Q68E01 1043 aaKnown RBP23.43■■□□□ 1.34
BLOC1S3-201ENST00000433642 PLEKHM2Q8IWE5 1019 aa23.42■■□□□ 1.34
BLOC1S3-201ENST00000433642 ESF1Q9H501 851 aaKnown RBP23.42■■□□□ 1.34
BLOC1S3-201ENST00000433642 DCTPP1Q9H773 170 aa23.42■■□□□ 1.34
BLOC1S3-201ENST00000433642 CHL1O00533 1208 aa23.42■■□□□ 1.34
BLOC1S3-201ENST00000433642 HSP90AB1P08238 724 aaKnown RBP23.42■■□□□ 1.34
BLOC1S3-201ENST00000433642 ACEP12821 1306 aa23.42■■□□□ 1.34
BLOC1S3-201ENST00000433642 XRCC6P12956 609 aaKnown RBP eCLIP23.41■■□□□ 1.34
BLOC1S3-201ENST00000433642 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.41■■□□□ 1.34
BLOC1S3-201ENST00000433642 OVOS2A0A0J9YW53 1432 aa23.41■■□□□ 1.34
BLOC1S3-201ENST00000433642 OVOS2Q6IE36 1432 aa23.41■■□□□ 1.34
BLOC1S3-201ENST00000433642 TMEM2Q9UHN6 1383 aa23.41■■□□□ 1.34
BLOC1S3-201ENST00000433642 HDGFP51858 240 aaKnown RBP23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms