RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 NEUROD2Q15784 382 aa13.9□□□□□ -0.18
NEFM-202ENST00000433454 CCDC27Q2M243 656 aa13.9□□□□□ -0.18
NEFM-202ENST00000433454 BRINP3Q76B58 766 aa13.9□□□□□ -0.18
NEFM-202ENST00000433454 WWC1Q8IX03 1113 aa13.9□□□□□ -0.18
NEFM-202ENST00000433454 PXDNQ92626 1479 aa13.89□□□□□ -0.19
NEFM-202ENST00000433454 USP19O94966 1318 aa13.89□□□□□ -0.19
NEFM-202ENST00000433454 HMOX1P09601 288 aa13.89□□□□□ -0.19
NEFM-202ENST00000433454 PHRF1Q9P1Y6 1649 aaKnown RBP13.89□□□□□ -0.19
NEFM-202ENST00000433454 PHF23Q9BUL5 403 aaPredicted RBP13.89□□□□□ -0.19
NEFM-202ENST00000433454 TNS3Q68CZ2 1445 aa13.88□□□□□ -0.19
NEFM-202ENST00000433454 DDX17Q92841 729 aaKnown RBP13.88□□□□□ -0.19
NEFM-202ENST00000433454 HOXC9P31274 260 aa13.88□□□□□ -0.19
NEFM-202ENST00000433454 ARHGEF10O15013 1369 aa13.87□□□□□ -0.19
NEFM-202ENST00000433454 E9PSI1 815 aa13.87□□□□□ -0.19
NEFM-202ENST00000433454 TMPOP42166 694 aaKnown RBP13.87□□□□□ -0.19
NEFM-202ENST00000433454 GCP02774 474 aa13.87□□□□□ -0.19
NEFM-202ENST00000433454 SLFN5Q08AF3 891 aa13.87□□□□□ -0.19
NEFM-202ENST00000433454 DUSP27Q5VZP5 1158 aa13.86□□□□□ -0.19
NEFM-202ENST00000433454 LTBP4Q8N2S1 1624 aa13.86□□□□□ -0.19
NEFM-202ENST00000433454 WDR63Q8IWG1 891 aa13.86□□□□□ -0.19
NEFM-202ENST00000433454 FKBP8Q14318 412 aa13.85□□□□□ -0.19
NEFM-202ENST00000433454 SULT6B1Q6IMI4 303 aa13.85□□□□□ -0.19
NEFM-202ENST00000433454 MED1Q15648 1581 aaPredicted RBP13.85□□□□□ -0.19
NEFM-202ENST00000433454 SPATA31A3Q5VYP0 1347 aa13.84□□□□□ -0.19
NEFM-202ENST00000433454 TRMT2AQ8IZ69 625 aaKnown RBP13.84□□□□□ -0.19
NEFM-202ENST00000433454 IP6K1Q92551 441 aa13.84□□□□□ -0.19
NEFM-202ENST00000433454 RCAN3Q9UKA8 241 aa13.84□□□□□ -0.19
NEFM-202ENST00000433454 RIPK4P57078 832 aa13.84□□□□□ -0.19
NEFM-202ENST00000433454 AEBP1Q8IUX7 1158 aa13.84□□□□□ -0.19
NEFM-202ENST00000433454 SPINK5Q9NQ38 1064 aaPredicted RBP13.84□□□□□ -0.19
NEFM-202ENST00000433454 NHSL1Q5SYE7 1610 aa13.84□□□□□ -0.19
NEFM-202ENST00000433454 IGSF1Q8N6C5 1336 aa13.83□□□□□ -0.19
NEFM-202ENST00000433454 KDRP35968 1356 aa13.83□□□□□ -0.2
NEFM-202ENST00000433454 NFE2L2Q16236 605 aa13.83□□□□□ -0.2
NEFM-202ENST00000433454 PHACTR3Q96KR7 559 aa13.83□□□□□ -0.2
NEFM-202ENST00000433454 SOS2Q07890 1332 aaPredicted RBP13.83□□□□□ -0.2
NEFM-202ENST00000433454 PLEKHG5O94827 1062 aa13.83□□□□□ -0.2
NEFM-202ENST00000433454 ARHGEF25Q86VW2 580 aa13.83□□□□□ -0.2
NEFM-202ENST00000433454 ZBTB7CA1YPR0 619 aa13.82□□□□□ -0.2
NEFM-202ENST00000433454 TRIM35Q9UPQ4 493 aa13.82□□□□□ -0.2
NEFM-202ENST00000433454 CRYBG1Q9Y4K1 1723 aa13.82□□□□□ -0.2
NEFM-202ENST00000433454 RNF123Q5XPI4 1314 aa13.82□□□□□ -0.2
NEFM-202ENST00000433454 EYA1Q99502 592 aa13.82□□□□□ -0.2
NEFM-202ENST00000433454 LTV1Q96GA3 475 aaPredicted RBP13.81□□□□□ -0.2
NEFM-202ENST00000433454 MYH16Q9H6N6 1097 aa13.8□□□□□ -0.2
NEFM-202ENST00000433454 DLG5Q8TDM6 1919 aa13.8□□□□□ -0.2
NEFM-202ENST00000433454 LMOD3Q0VAK6 560 aa13.8□□□□□ -0.2
NEFM-202ENST00000433454 IL16Q14005 1332 aa13.79□□□□□ -0.2
NEFM-202ENST00000433454 ABCC6O95255 1503 aa13.78□□□□□ -0.2
NEFM-202ENST00000433454 ROBO1Q9Y6N7 1651 aa13.78□□□□□ -0.2
NEFM-202ENST00000433454 IRX6P78412 446 aaPredicted RBP13.78□□□□□ -0.2
NEFM-202ENST00000433454 ZC3H6P61129 1189 aaKnown RBP13.78□□□□□ -0.2
NEFM-202ENST00000433454 CALD1Q05682 793 aaKnown RBP13.78□□□□□ -0.2
NEFM-202ENST00000433454 RRP1P56182 461 aaKnown RBP13.77□□□□□ -0.21
NEFM-202ENST00000433454 CABLES1Q8TDN4 633 aa13.77□□□□□ -0.21
NEFM-202ENST00000433454 CPDO75976 1380 aa13.76□□□□□ -0.21
NEFM-202ENST00000433454 ERICH6BQ5W0A0 696 aa13.76□□□□□ -0.21
NEFM-202ENST00000433454 RGPD5Q99666 1765 aa13.75□□□□□ -0.21
NEFM-202ENST00000433454 ABCA3Q99758 1704 aa13.75□□□□□ -0.21
NEFM-202ENST00000433454 AHDC1Q5TGY3 1603 aaPredicted RBP13.75□□□□□ -0.21
NEFM-202ENST00000433454 FANCIQ9NVI1 1328 aa13.75□□□□□ -0.21
NEFM-202ENST00000433454 RGPD2P0DJD1 1756 aa13.75□□□□□ -0.21
NEFM-202ENST00000433454 ANKRD24Q8TF21 1146 aa13.75□□□□□ -0.21
NEFM-202ENST00000433454 CAMTA1Q9Y6Y1 1673 aa13.75□□□□□ -0.21
NEFM-202ENST00000433454 COL18A1P39060 1754 aa13.74□□□□□ -0.21
NEFM-202ENST00000433454 ERBB3P21860 1342 aa13.74□□□□□ -0.21
NEFM-202ENST00000433454 NBPF6Q5VWK0 638 aa13.74□□□□□ -0.21
NEFM-202ENST00000433454 GAS2L2Q8NHY3 880 aa13.74□□□□□ -0.21
NEFM-202ENST00000433454 NBPF4Q96M43 638 aa13.74□□□□□ -0.21
NEFM-202ENST00000433454 AXIN2Q9Y2T1 843 aa13.74□□□□□ -0.21
NEFM-202ENST00000433454 KIAA0232Q92628 1395 aa13.74□□□□□ -0.21
NEFM-202ENST00000433454 NCAPD2Q15021 1401 aa13.73□□□□□ -0.21
NEFM-202ENST00000433454 USHBP1Q8N6Y0 703 aa13.73□□□□□ -0.21
NEFM-202ENST00000433454 TSR2Q969E8 191 aaKnown RBP13.73□□□□□ -0.21
NEFM-202ENST00000433454 FAM208AQ9UK61 1670 aaKnown RBP13.73□□□□□ -0.21
NEFM-202ENST00000433454 HAP1P54257 671 aaPredicted RBP13.72□□□□□ -0.21
NEFM-202ENST00000433454 MTHFSDQ2M296 383 aaKnown RBP13.72□□□□□ -0.21
NEFM-202ENST00000433454 AEBP2Q6ZN18 517 aaPredicted RBP13.72□□□□□ -0.21
NEFM-202ENST00000433454 LRRC59Q96AG4 307 aaKnown RBP13.72□□□□□ -0.21
NEFM-202ENST00000433454 THUMPD2Q9BTF0 503 aaKnown RBP13.72□□□□□ -0.21
NEFM-202ENST00000433454 IFT57Q9NWB7 429 aa13.72□□□□□ -0.21
NEFM-202ENST00000433454 GNAI1P63096 354 aa13.71□□□□□ -0.21
NEFM-202ENST00000433454 LMO7Q8WWI1 1683 aa13.71□□□□□ -0.21
NEFM-202ENST00000433454 FAM83GA6ND36 823 aa13.71□□□□□ -0.21
NEFM-202ENST00000433454 CT47B1P0C2W7 299 aaPredicted RBP13.71□□□□□ -0.21
NEFM-202ENST00000433454 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.7□□□□□ -0.22
NEFM-202ENST00000433454 RTF1Q92541 710 aaKnown RBP13.7□□□□□ -0.22
NEFM-202ENST00000433454 CHRNA2Q15822 529 aa13.7□□□□□ -0.22
NEFM-202ENST00000433454 PRDM11Q9NQV5 511 aa13.7□□□□□ -0.22
NEFM-202ENST00000433454 LAS1LQ9Y4W2 734 aaKnown RBP13.7□□□□□ -0.22
NEFM-202ENST00000433454 TOM1O60784 492 aa13.69□□□□□ -0.22
NEFM-202ENST00000433454 DCTN1Q14203 1278 aa13.69□□□□□ -0.22
NEFM-202ENST00000433454 CFAP44Q96MT7 982 aa13.69□□□□□ -0.22
NEFM-202ENST00000433454 MAP3K5Q99683 1374 aa13.69□□□□□ -0.22
NEFM-202ENST00000433454 HTATSF1O43719 755 aaKnown RBP13.68□□□□□ -0.22
NEFM-202ENST00000433454 ZNF853P0CG23 659 aa13.68□□□□□ -0.22
NEFM-202ENST00000433454 EXOSC9Q06265 439 aaKnown RBP13.68□□□□□ -0.22
NEFM-202ENST00000433454 MCM10Q7L590 875 aa13.68□□□□□ -0.22
NEFM-202ENST00000433454 CSB-PGBD3P0DP91 1061 aa13.68□□□□□ -0.22
NEFM-202ENST00000433454 LRRC37A3O60309 1634 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms