RNA–Protein interactions for RNA: ENST00000431737.1

LINC00840-201, long intergenic non-protein coding RNA 840, humanhuman

TSL 2 BASIC

Gene LINC00840, Length 1,974 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00840-201ENST00000431737 NGDNQ8NEJ9 315 aaKnown RBP16.33■□□□□ 0.21
LINC00840-201ENST00000431737 FLT4P35916 1363 aa16.33■□□□□ 0.2
LINC00840-201ENST00000431737 HMOX1P09601 288 aa16.33■□□□□ 0.2
LINC00840-201ENST00000431737 LMOD3Q0VAK6 560 aa16.33■□□□□ 0.2
LINC00840-201ENST00000431737 TSR2Q969E8 191 aaKnown RBP16.33■□□□□ 0.2
LINC00840-201ENST00000431737 PHRF1Q9P1Y6 1649 aaKnown RBP16.33■□□□□ 0.2
LINC00840-201ENST00000431737 EXOSC9Q06265 439 aaKnown RBP16.32■□□□□ 0.2
LINC00840-201ENST00000431737 PMFBP1Q8TBY8 1022 aa16.32■□□□□ 0.2
LINC00840-201ENST00000431737 ZNF428Q96B54 188 aa16.32■□□□□ 0.2
LINC00840-201ENST00000431737 CANXP27824 592 aaKnown RBP16.31■□□□□ 0.2
LINC00840-201ENST00000431737 ZNF853P0CG23 659 aa16.3■□□□□ 0.2
LINC00840-201ENST00000431737 IFT57Q9NWB7 429 aa16.3■□□□□ 0.2
LINC00840-201ENST00000431737 MAP3K19Q56UN5 1328 aa16.3■□□□□ 0.2
LINC00840-201ENST00000431737 KDRP35968 1356 aa16.3■□□□□ 0.2
LINC00840-201ENST00000431737 LTN1O94822 1766 aa16.3■□□□□ 0.2
LINC00840-201ENST00000431737 BRPF1P55201 1214 aaPredicted RBP16.29■□□□□ 0.2
LINC00840-201ENST00000431737 PANK1Q8TE04 598 aa16.29■□□□□ 0.2
LINC00840-201ENST00000431737 CLUAP1Q96AJ1 413 aa16.29■□□□□ 0.2
LINC00840-201ENST00000431737 KIF1AQ12756 1690 aa16.29■□□□□ 0.2
LINC00840-201ENST00000431737 RTL1A6NKG5 1358 aa16.28■□□□□ 0.2
LINC00840-201ENST00000431737 ALDH1L2Q3SY69 923 aa16.28■□□□□ 0.2
LINC00840-201ENST00000431737 NFAT5O94916 1531 aa16.28■□□□□ 0.2
LINC00840-201ENST00000431737 GNAI1P63096 354 aa16.27■□□□□ 0.2
LINC00840-201ENST00000431737 ZKSCAN2Q63HK3 967 aa16.27■□□□□ 0.2
LINC00840-201ENST00000431737 LRRC37A3O60309 1634 aa16.27■□□□□ 0.2
LINC00840-201ENST00000431737 FRAT1Q92837 279 aaPredicted RBP16.27■□□□□ 0.19
LINC00840-201ENST00000431737 PHF8Q9UPP1 1060 aa16.27■□□□□ 0.19
LINC00840-201ENST00000431737 VIRMAQ69YN4 1812 aaKnown RBP16.26■□□□□ 0.19
LINC00840-201ENST00000431737 KIF16BQ96L93 1317 aa16.26■□□□□ 0.19
LINC00840-201ENST00000431737 RLBP1P12271 317 aa16.26■□□□□ 0.19
LINC00840-201ENST00000431737 HSP90AB2PQ58FF8 381 aa16.26■□□□□ 0.19
LINC00840-201ENST00000431737 SSH1Q8WYL5 1049 aa16.26■□□□□ 0.19
LINC00840-201ENST00000431737 COG6Q9Y2V7 657 aa16.26■□□□□ 0.19
LINC00840-201ENST00000431737 TRPM3Q9HCF6 1732 aaPredicted RBP16.26■□□□□ 0.19
LINC00840-201ENST00000431737 SMC4Q9NTJ3 1288 aa16.26■□□□□ 0.19
LINC00840-201ENST00000431737 IGSF1Q8N6C5 1336 aa16.25■□□□□ 0.19
LINC00840-201ENST00000431737 BCL2L13Q9BXK5 485 aa16.25■□□□□ 0.19
LINC00840-201ENST00000431737 SULT6B1Q6IMI4 303 aa16.24■□□□□ 0.19
LINC00840-201ENST00000431737 AEBP1Q8IUX7 1158 aa16.24■□□□□ 0.19
LINC00840-201ENST00000431737 MVPQ14764 893 aaKnown RBP16.24■□□□□ 0.19
LINC00840-201ENST00000431737 CFAP44Q96MT7 982 aa16.24■□□□□ 0.19
LINC00840-201ENST00000431737 SLIT3O75094 1523 aa16.23■□□□□ 0.19
LINC00840-201ENST00000431737 DZIP1LQ8IYY4 767 aaKnown RBP16.23■□□□□ 0.19
LINC00840-201ENST00000431737 MST1RQ04912 1400 aa16.23■□□□□ 0.19
LINC00840-201ENST00000431737 NLRP6P59044 892 aa16.22■□□□□ 0.19
LINC00840-201ENST00000431737 ATF7IPQ6VMQ6 1270 aa16.22■□□□□ 0.19
LINC00840-201ENST00000431737 TNNQ9UQP3 1299 aa16.22■□□□□ 0.19
LINC00840-201ENST00000431737 TRIM27P14373 513 aa16.22■□□□□ 0.19
LINC00840-201ENST00000431737 BACH2Q9BYV9 841 aa16.22■□□□□ 0.19
LINC00840-201ENST00000431737 STRCP1A6NGW2 1772 aa16.21■□□□□ 0.19
LINC00840-201ENST00000431737 THUMPD2Q9BTF0 503 aaKnown RBP16.21■□□□□ 0.19
LINC00840-201ENST00000431737 MBIPQ9NS73 344 aa16.21■□□□□ 0.19
LINC00840-201ENST00000431737 PDE4AP27815 886 aa16.2■□□□□ 0.18
LINC00840-201ENST00000431737 NCOA3Q9Y6Q9 1424 aa16.2■□□□□ 0.18
LINC00840-201ENST00000431737 IPO8O15397 1037 aaKnown RBP16.2■□□□□ 0.18
LINC00840-201ENST00000431737 VAMP4O75379 141 aa16.2■□□□□ 0.18
LINC00840-201ENST00000431737 FTSJ3Q8IY81 847 aaKnown RBP16.2■□□□□ 0.18
LINC00840-201ENST00000431737 DCCP43146 1447 aa16.2■□□□□ 0.18
LINC00840-201ENST00000431737 IGHDP01880 384 aa16.19■□□□□ 0.18
LINC00840-201ENST00000431737 HOXC9P31274 260 aa16.19■□□□□ 0.18
LINC00840-201ENST00000431737 AMPHP49418 695 aa16.19■□□□□ 0.18
LINC00840-201ENST00000431737 ABTB2Q8N961 1025 aa16.19■□□□□ 0.18
LINC00840-201ENST00000431737 ARHGAP45Q92619 1136 aa16.19■□□□□ 0.18
LINC00840-201ENST00000431737 CRB1P82279 1406 aa16.19■□□□□ 0.18
LINC00840-201ENST00000431737 KIAA0232Q92628 1395 aa16.19■□□□□ 0.18
LINC00840-201ENST00000431737 ALS2Q96Q42 1657 aa16.18■□□□□ 0.18
LINC00840-201ENST00000431737 DDX19BQ9UMR2 479 aa16.18■□□□□ 0.18
LINC00840-201ENST00000431737 CAMTA1Q9Y6Y1 1673 aa16.18■□□□□ 0.18
LINC00840-201ENST00000431737 EYA1Q99502 592 aa16.17■□□□□ 0.18
LINC00840-201ENST00000431737 NOB1Q9ULX3 412 aaKnown RBP16.17■□□□□ 0.18
LINC00840-201ENST00000431737 PCDHB15Q9Y5E8 787 aa16.17■□□□□ 0.18
LINC00840-201ENST00000431737 C1orf167Q5SNV9 1468 aa16.17■□□□□ 0.18
LINC00840-201ENST00000431737 CHL1O00533 1208 aa16.17■□□□□ 0.18
LINC00840-201ENST00000431737 FAM83GA6ND36 823 aa16.16■□□□□ 0.18
LINC00840-201ENST00000431737 SOX12O15370 315 aa16.16■□□□□ 0.18
LINC00840-201ENST00000431737 MSH5O43196 834 aa16.16■□□□□ 0.18
LINC00840-201ENST00000431737 MRPL50Q8N5N7 158 aaKnown RBP16.16■□□□□ 0.18
LINC00840-201ENST00000431737 LAS1LQ9Y4W2 734 aaKnown RBP16.16■□□□□ 0.18
LINC00840-201ENST00000431737 HTATSF1O43719 755 aaKnown RBP16.15■□□□□ 0.18
LINC00840-201ENST00000431737 ESCO1Q5FWF5 840 aa16.15■□□□□ 0.18
LINC00840-201ENST00000431737 SKAP1Q86WV1 359 aa16.15■□□□□ 0.18
LINC00840-201ENST00000431737 TSPYL6Q8N831 410 aa16.15■□□□□ 0.18
LINC00840-201ENST00000431737 NCAPD2Q15021 1401 aa16.14■□□□□ 0.17
LINC00840-201ENST00000431737 HAP1P54257 671 aaPredicted RBP16.14■□□□□ 0.17
LINC00840-201ENST00000431737 TWISTNBQ3B726 338 aaPredicted RBP16.14■□□□□ 0.17
LINC00840-201ENST00000431737 KCNH5Q8NCM2 988 aa16.14■□□□□ 0.17
LINC00840-201ENST00000431737 GAS2L2Q8NHY3 880 aa16.14■□□□□ 0.17
LINC00840-201ENST00000431737 PAK3O75914 559 aaPredicted RBP16.13■□□□□ 0.17
LINC00840-201ENST00000431737 USP19O94966 1318 aa16.13■□□□□ 0.17
LINC00840-201ENST00000431737 RBM33Q96EV2 1170 aaKnown RBP16.13■□□□□ 0.17
LINC00840-201ENST00000431737 RWDD1Q9H446 243 aaPredicted RBP16.13■□□□□ 0.17
LINC00840-201ENST00000431737 ABCC4O15439 1325 aa16.13■□□□□ 0.17
LINC00840-201ENST00000431737 PSME1Q06323 249 aa16.13■□□□□ 0.17
LINC00840-201ENST00000431737 HDAC1Q13547 482 aaPredicted RBP16.13■□□□□ 0.17
LINC00840-201ENST00000431737 DCTN1Q14203 1278 aa16.13■□□□□ 0.17
LINC00840-201ENST00000431737 MTHFSDQ2M296 383 aaKnown RBP16.13■□□□□ 0.17
LINC00840-201ENST00000431737 C8orf58Q8NAV2 365 aa16.13■□□□□ 0.17
LINC00840-201ENST00000431737 IP6K1Q92551 441 aa16.13■□□□□ 0.17
LINC00840-201ENST00000431737 LMO7Q8WWI1 1683 aa16.12■□□□□ 0.17
LINC00840-201ENST00000431737 MED1Q15648 1581 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms