RNA–Protein interactions for RNA: ENST00000431387.8

NF1-204, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-204ENST00000431387 RRP9O43818 475 aaKnown RBP17.01■□□□□ 0.31
NF1-204ENST00000431387 RIMS2Q9UQ26 1411 aa17.01■□□□□ 0.31
NF1-204ENST00000431387 NUCB1Q02818 461 aa17■□□□□ 0.31
NF1-204ENST00000431387 NME9Q86XW9 330 aa17■□□□□ 0.31
NF1-204ENST00000431387 ZNF692Q9BU19 519 aaPredicted RBP17■□□□□ 0.31
NF1-204ENST00000431387 LNPKQ9C0E8 428 aa17■□□□□ 0.31
NF1-204ENST00000431387 ZRANB1Q9UGI0 708 aa17■□□□□ 0.31
NF1-204ENST00000431387 FAM69CQ0P6D2 419 aa16.99■□□□□ 0.31
NF1-204ENST00000431387 HSCBQ8IWL3 235 aa16.99■□□□□ 0.31
NF1-204ENST00000431387 PPIP5K1Q6PFW1 1433 aa16.99■□□□□ 0.31
NF1-204ENST00000431387 VAMP4O75379 141 aa16.99■□□□□ 0.31
NF1-204ENST00000431387 BRPF1P55201 1214 aaPredicted RBP16.99■□□□□ 0.31
NF1-204ENST00000431387 TSPYL6Q8N831 410 aa16.99■□□□□ 0.31
NF1-204ENST00000431387 IL13P35225 146 aa16.99■□□□□ 0.31
NF1-204ENST00000431387 MRPL50Q8N5N7 158 aaKnown RBP16.98■□□□□ 0.31
NF1-204ENST00000431387 ZNF428Q96B54 188 aa16.98■□□□□ 0.31
NF1-204ENST00000431387 MAP2P11137 1827 aaKnown RBP16.98■□□□□ 0.31
NF1-204ENST00000431387 RIMBP3CA6NJZ7 1639 aa16.98■□□□□ 0.31
NF1-204ENST00000431387 RIMBP3BA6NNM3 1639 aa16.98■□□□□ 0.31
NF1-204ENST00000431387 RIMBP3Q9UFD9 1639 aa16.98■□□□□ 0.31
NF1-204ENST00000431387 ELL2O00472 640 aaPredicted RBP16.98■□□□□ 0.31
NF1-204ENST00000431387 TRIM44Q96DX7 344 aaPredicted RBP16.98■□□□□ 0.31
NF1-204ENST00000431387 CPSF1Q10570 1443 aaKnown RBP16.97■□□□□ 0.31
NF1-204ENST00000431387 WASLO00401 505 aaPredicted RBP16.97■□□□□ 0.31
NF1-204ENST00000431387 MLECQ14165 292 aa16.97■□□□□ 0.31
NF1-204ENST00000431387 CHD1LQ86WJ1 897 aa16.97■□□□□ 0.31
NF1-204ENST00000431387 SETD1AO15047 1707 aaKnown RBP16.97■□□□□ 0.31
NF1-204ENST00000431387 ZBTB7BO15156 539 aaPredicted RBP16.97■□□□□ 0.31
NF1-204ENST00000431387 TNPO1Q92973 898 aaKnown RBP16.97■□□□□ 0.31
NF1-204ENST00000431387 EDC4Q6P2E9 1401 aaKnown RBP16.96■□□□□ 0.31
NF1-204ENST00000431387 C1orf115Q9H7X2 142 aa16.96■□□□□ 0.31
NF1-204ENST00000431387 NCKAP5LQ9HCH0 1330 aa16.96■□□□□ 0.31
NF1-204ENST00000431387 DDX11L8A8MPP1 907 aa16.96■□□□□ 0.31
NF1-204ENST00000431387 CALD1Q05682 793 aaKnown RBP16.96■□□□□ 0.31
NF1-204ENST00000431387 MBIPQ9NS73 344 aa16.96■□□□□ 0.31
NF1-204ENST00000431387 IFT57Q9NWB7 429 aa16.96■□□□□ 0.31
NF1-204ENST00000431387 GNAI1P63096 354 aa16.95■□□□□ 0.3
NF1-204ENST00000431387 PPP6R1Q9UPN7 881 aa16.95■□□□□ 0.3
NF1-204ENST00000431387 TXNDC2Q86VQ3 553 aa16.95■□□□□ 0.3
NF1-204ENST00000431387 SPATA31D1Q6ZQQ2 1576 aa16.95■□□□□ 0.3
NF1-204ENST00000431387 METP08581 1390 aa16.95■□□□□ 0.3
NF1-204ENST00000431387 ZNF853P0CG23 659 aa16.94■□□□□ 0.3
NF1-204ENST00000431387 RRS1Q15050 365 aaKnown RBP16.94■□□□□ 0.3
NF1-204ENST00000431387 ARHGAP45Q92619 1136 aa16.94■□□□□ 0.3
NF1-204ENST00000431387 AGLP35573 1532 aa16.94■□□□□ 0.3
NF1-204ENST00000431387 NUDT16Q96DE0 195 aaKnown RBP16.94■□□□□ 0.3
NF1-204ENST00000431387 CDK12Q9NYV4 1490 aaPredicted RBP16.94■□□□□ 0.3
NF1-204ENST00000431387 PTCH1Q13635 1447 aa16.94■□□□□ 0.3
NF1-204ENST00000431387 ANKRD45Q5TZF3 282 aa16.93■□□□□ 0.3
NF1-204ENST00000431387 PIK3R4Q99570 1358 aa16.93■□□□□ 0.3
NF1-204ENST00000431387 AATKQ6ZMQ8 1374 aa16.92■□□□□ 0.3
NF1-204ENST00000431387 REREQ9P2R6 1566 aa16.92■□□□□ 0.3
NF1-204ENST00000431387 TWISTNBQ3B726 338 aaPredicted RBP16.92■□□□□ 0.3
NF1-204ENST00000431387 C8orf58Q8NAV2 365 aa16.92■□□□□ 0.3
NF1-204ENST00000431387 COG3Q96JB2 828 aa16.92■□□□□ 0.3
NF1-204ENST00000431387 CPS1P31327 1500 aa16.91■□□□□ 0.3
NF1-204ENST00000431387 NRXN3Q9Y4C0 1643 aa16.91■□□□□ 0.3
NF1-204ENST00000431387 FAM83GA6ND36 823 aa16.91■□□□□ 0.3
NF1-204ENST00000431387 TSPOAP1O95153 1857 aa16.91■□□□□ 0.3
NF1-204ENST00000431387 CD2BP2O95400 341 aaKnown RBP16.91■□□□□ 0.3
NF1-204ENST00000431387 ABCC4O15439 1325 aa16.91■□□□□ 0.3
NF1-204ENST00000431387 HSP90AB1P08238 724 aaKnown RBP16.91■□□□□ 0.3
NF1-204ENST00000431387 DDIT3P35638 169 aa16.91■□□□□ 0.3
NF1-204ENST00000431387 RBM25P49756 843 aaKnown RBP16.91■□□□□ 0.3
NF1-204ENST00000431387 BMP2KLQ5H9B9 411 aa16.91■□□□□ 0.3
NF1-204ENST00000431387 SIRT2Q8IXJ6 389 aa16.91■□□□□ 0.3
NF1-204ENST00000431387 GCC1Q96CN9 775 aa16.91■□□□□ 0.3
NF1-204ENST00000431387 CFAP44Q96MT7 982 aa16.91■□□□□ 0.3
NF1-204ENST00000431387 DIP2BQ9P265 1576 aa16.9■□□□□ 0.3
NF1-204ENST00000431387 DCTN1Q14203 1278 aa16.9■□□□□ 0.3
NF1-204ENST00000431387 CHMP4BQ9H444 224 aaKnown RBP16.9■□□□□ 0.3
NF1-204ENST00000431387 CCDC61Q9Y6R9 512 aa16.9■□□□□ 0.3
NF1-204ENST00000431387 LMOD3Q0VAK6 560 aa16.89■□□□□ 0.29
NF1-204ENST00000431387 KIAA1211Q6ZU35 1233 aa16.88■□□□□ 0.29
NF1-204ENST00000431387 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.88■□□□□ 0.29
NF1-204ENST00000431387 RBM42Q9BTD8 480 aaKnown RBP16.88■□□□□ 0.29
NF1-204ENST00000431387 RBM10P98175 930 aaKnown RBP16.86■□□□□ 0.29
NF1-204ENST00000431387 DLG5Q8TDM6 1919 aa16.86■□□□□ 0.29
NF1-204ENST00000431387 GBP4Q96PP9 640 aa16.86■□□□□ 0.29
NF1-204ENST00000431387 API5Q9BZZ5 524 aaKnown RBP16.86■□□□□ 0.29
NF1-204ENST00000431387 PRR36Q9H6K5 1346 aa16.86■□□□□ 0.29
NF1-204ENST00000431387 MON2Q7Z3U7 1717 aa16.85■□□□□ 0.29
NF1-204ENST00000431387 SSFA2P28290 1259 aa16.85■□□□□ 0.29
NF1-204ENST00000431387 SNX21Q969T3 373 aa16.85■□□□□ 0.29
NF1-204ENST00000431387 RAB3GAP1Q15042 981 aa16.85■□□□□ 0.29
NF1-204ENST00000431387 AEBP1Q8IUX7 1158 aa16.85■□□□□ 0.29
NF1-204ENST00000431387 NCOA3Q9Y6Q9 1424 aa16.84■□□□□ 0.29
NF1-204ENST00000431387 TBC1D9Q6ZT07 1266 aa16.84■□□□□ 0.29
NF1-204ENST00000431387 KIF2CQ99661 725 aa16.84■□□□□ 0.29
NF1-204ENST00000431387 NASPP49321 788 aaPredicted RBP16.83■□□□□ 0.28
NF1-204ENST00000431387 SIRT1Q96EB6 747 aa16.83■□□□□ 0.28
NF1-204ENST00000431387 ISY1Q9ULR0 285 aaKnown RBP16.83■□□□□ 0.28
NF1-204ENST00000431387 C3P01024 1663 aa16.83■□□□□ 0.28
NF1-204ENST00000431387 EIF4A2Q14240 407 aaKnown RBP16.83■□□□□ 0.28
NF1-204ENST00000431387 TECPR2O15040 1411 aa16.82■□□□□ 0.28
NF1-204ENST00000431387 KRT24Q2M2I5 525 aa16.82■□□□□ 0.28
NF1-204ENST00000431387 SULT6B1Q6IMI4 303 aa16.82■□□□□ 0.28
NF1-204ENST00000431387 ESF1Q9H501 851 aaKnown RBP16.81■□□□□ 0.28
NF1-204ENST00000431387 AKAP12Q02952 1782 aa16.81■□□□□ 0.28
NF1-204ENST00000431387 TPM2P07951 284 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms