RNA–Protein interactions for RNA: ENST00000431239.5

CHD1L-204, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 2,907 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-204ENST00000431239 CPSF1Q10570 1443 aaKnown RBP23.37■■□□□ 1.33
CHD1L-204ENST00000431239 AGLP35573 1532 aa23.36■■□□□ 1.33
CHD1L-204ENST00000431239 C22orf23Q9BZE7 217 aa23.36■■□□□ 1.33
CHD1L-204ENST00000431239 PPP6R1Q9UPN7 881 aa23.36■■□□□ 1.33
CHD1L-204ENST00000431239 CPS1P31327 1500 aa23.36■■□□□ 1.33
CHD1L-204ENST00000431239 NRXN3Q9Y4C0 1643 aa23.36■■□□□ 1.33
CHD1L-204ENST00000431239 CCDC61Q9Y6R9 512 aa23.35■■□□□ 1.33
CHD1L-204ENST00000431239 SOX12O15370 315 aa23.35■■□□□ 1.33
CHD1L-204ENST00000431239 MRPL50Q8N5N7 158 aaKnown RBP23.33■■□□□ 1.33
CHD1L-204ENST00000431239 GNAI1P63096 354 aa23.33■■□□□ 1.33
CHD1L-204ENST00000431239 C8orf58Q8NAV2 365 aa23.32■■□□□ 1.32
CHD1L-204ENST00000431239 TWISTNBQ3B726 338 aaPredicted RBP23.32■■□□□ 1.32
CHD1L-204ENST00000431239 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.32■■□□□ 1.32
CHD1L-204ENST00000431239 PRR36Q9H6K5 1346 aa23.32■■□□□ 1.32
CHD1L-204ENST00000431239 AEBP1Q8IUX7 1158 aa23.32■■□□□ 1.32
CHD1L-204ENST00000431239 REREQ9P2R6 1566 aa23.31■■□□□ 1.32
CHD1L-204ENST00000431239 NUCB1Q02818 461 aa23.31■■□□□ 1.32
CHD1L-204ENST00000431239 ANTXR1Q9H6X2 564 aa23.31■■□□□ 1.32
CHD1L-204ENST00000431239 IFT57Q9NWB7 429 aa23.31■■□□□ 1.32
CHD1L-204ENST00000431239 CDK12Q9NYV4 1490 aaPredicted RBP23.31■■□□□ 1.32
CHD1L-204ENST00000431239 ANKRD45Q5TZF3 282 aa23.31■■□□□ 1.32
CHD1L-204ENST00000431239 CALD1Q05682 793 aaKnown RBP23.3■■□□□ 1.32
CHD1L-204ENST00000431239 CHD1LQ86WJ1 897 aa23.3■■□□□ 1.32
CHD1L-204ENST00000431239 ZBTB7BO15156 539 aaPredicted RBP23.29■■□□□ 1.32
CHD1L-204ENST00000431239 PLPPR3Q6T4P5 718 aa23.29■■□□□ 1.32
CHD1L-204ENST00000431239 KRT24Q2M2I5 525 aa23.27■■□□□ 1.32
CHD1L-204ENST00000431239 ZNF853P0CG23 659 aa23.27■■□□□ 1.32
CHD1L-204ENST00000431239 DLG5Q8TDM6 1919 aa23.27■■□□□ 1.32
CHD1L-204ENST00000431239 SULT6B1Q6IMI4 303 aa23.26■■□□□ 1.31
CHD1L-204ENST00000431239 ZNF428Q96B54 188 aa23.26■■□□□ 1.31
CHD1L-204ENST00000431239 CFAP44Q96MT7 982 aa23.26■■□□□ 1.31
CHD1L-204ENST00000431239 ROBO2Q9HCK4 1378 aa23.26■■□□□ 1.31
CHD1L-204ENST00000431239 AATKQ6ZMQ8 1374 aa23.25■■□□□ 1.31
CHD1L-204ENST00000431239 BRPF1P55201 1214 aaPredicted RBP23.23■■□□□ 1.31
CHD1L-204ENST00000431239 LMOD3Q0VAK6 560 aa23.23■■□□□ 1.31
CHD1L-204ENST00000431239 EIF4A2Q14240 407 aaKnown RBP23.23■■□□□ 1.31
CHD1L-204ENST00000431239 SIRT2Q8IXJ6 389 aa23.23■■□□□ 1.31
CHD1L-204ENST00000431239 TNRQ92752 1358 aa23.23■■□□□ 1.31
CHD1L-204ENST00000431239 PTCH1Q13635 1447 aa23.23■■□□□ 1.31
CHD1L-204ENST00000431239 MCM10Q7L590 875 aa23.23■■□□□ 1.31
CHD1L-204ENST00000431239 ARXQ96QS3 562 aa23.22■■□□□ 1.31
CHD1L-204ENST00000431239 MON2Q7Z3U7 1717 aa23.22■■□□□ 1.31
CHD1L-204ENST00000431239 SLC26A8Q96RN1 970 aa23.22■■□□□ 1.31
CHD1L-204ENST00000431239 ABCC4O15439 1325 aa23.21■■□□□ 1.31
CHD1L-204ENST00000431239 ACEP12821 1306 aa23.21■■□□□ 1.31
CHD1L-204ENST00000431239 HDGFP51858 240 aaKnown RBP23.21■■□□□ 1.31
CHD1L-204ENST00000431239 ARHGAP45Q92619 1136 aa23.21■■□□□ 1.31
CHD1L-204ENST00000431239 HSP90AB2PQ58FF8 381 aa23.2■■□□□ 1.3
CHD1L-204ENST00000431239 ITSN1Q15811 1721 aa23.2■■□□□ 1.3
CHD1L-204ENST00000431239 TTC21BQ7Z4L5 1316 aa23.2■■□□□ 1.3
CHD1L-204ENST00000431239 ZNF692Q9BU19 519 aaPredicted RBP23.19■■□□□ 1.3
CHD1L-204ENST00000431239 TMEM2Q9UHN6 1383 aa23.19■■□□□ 1.3
CHD1L-204ENST00000431239 HSCBQ8IWL3 235 aa23.19■■□□□ 1.3
CHD1L-204ENST00000431239 C3P01024 1663 aa23.19■■□□□ 1.3
CHD1L-204ENST00000431239 LTKP29376 864 aa23.18■■□□□ 1.3
CHD1L-204ENST00000431239 CEBPAP49715 358 aaPredicted RBP23.18■■□□□ 1.3
CHD1L-204ENST00000431239 GCC1Q96CN9 775 aa23.18■■□□□ 1.3
CHD1L-204ENST00000431239 PIK3R4Q99570 1358 aa23.18■■□□□ 1.3
CHD1L-204ENST00000431239 TECPR2O15040 1411 aa23.17■■□□□ 1.3
CHD1L-204ENST00000431239 AKAP12Q02952 1782 aa23.16■■□□□ 1.3
CHD1L-204ENST00000431239 BMP2KLQ5H9B9 411 aa23.16■■□□□ 1.3
CHD1L-204ENST00000431239 API5Q9BZZ5 524 aaKnown RBP23.16■■□□□ 1.3
CHD1L-204ENST00000431239 MIS18AQ9NYP9 233 aa23.16■■□□□ 1.3
CHD1L-204ENST00000431239 CHMP4BQ9H444 224 aaKnown RBP23.15■■□□□ 1.3
CHD1L-204ENST00000431239 KNDC1Q76NI1 1749 aa23.15■■□□□ 1.3
CHD1L-204ENST00000431239 GZF1Q9H116 711 aaPredicted RBP23.14■■□□□ 1.3
CHD1L-204ENST00000431239 APBB1O00213 710 aa23.14■■□□□ 1.29
CHD1L-204ENST00000431239 ADAMTS13Q76LX8 1427 aa23.14■■□□□ 1.29
CHD1L-204ENST00000431239 TBC1D9Q6ZT07 1266 aa23.13■■□□□ 1.29
CHD1L-204ENST00000431239 SIRT1Q96EB6 747 aa23.12■■□□□ 1.29
CHD1L-204ENST00000431239 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.12■■□□□ 1.29
CHD1L-204ENST00000431239 FOXO3O43524 673 aa23.12■■□□□ 1.29
CHD1L-204ENST00000431239 FOXD4L1Q9NU39 408 aa23.12■■□□□ 1.29
CHD1L-204ENST00000431239 CHMP5Q9NZZ3 219 aa23.12■■□□□ 1.29
CHD1L-204ENST00000431239 RBM25P49756 843 aaKnown RBP23.11■■□□□ 1.29
CHD1L-204ENST00000431239 UBR1Q8IWV7 1749 aa23.11■■□□□ 1.29
CHD1L-204ENST00000431239 MCM4P33991 863 aa23.1■■□□□ 1.29
CHD1L-204ENST00000431239 C16orf71Q8IYS4 520 aaPredicted RBP23.09■■□□□ 1.29
CHD1L-204ENST00000431239 USP6P35125 1406 aa23.09■■□□□ 1.29
CHD1L-204ENST00000431239 RBM42Q9BTD8 480 aaKnown RBP23.09■■□□□ 1.29
CHD1L-204ENST00000431239 OVOS2A0A0J9YW53 1432 aa23.08■■□□□ 1.29
CHD1L-204ENST00000431239 OVOS2Q6IE36 1432 aa23.08■■□□□ 1.29
CHD1L-204ENST00000431239 KIF13AQ9H1H9 1805 aa23.08■■□□□ 1.29
CHD1L-204ENST00000431239 HSP90AB1P08238 724 aaKnown RBP23.08■■□□□ 1.28
CHD1L-204ENST00000431239 CHL1O00533 1208 aa23.07■■□□□ 1.28
CHD1L-204ENST00000431239 CD2BP2O95400 341 aaKnown RBP23.07■■□□□ 1.28
CHD1L-204ENST00000431239 GSPT1P15170 499 aaKnown RBP23.07■■□□□ 1.28
CHD1L-204ENST00000431239 NRKQ7Z2Y5 1582 aa23.07■■□□□ 1.28
CHD1L-204ENST00000431239 PEAK1Q9H792 1746 aa23.07■■□□□ 1.28
CHD1L-204ENST00000431239 MSH6P52701 1360 aa23.06■■□□□ 1.28
CHD1L-204ENST00000431239 MAP3K19Q56UN5 1328 aa23.06■■□□□ 1.28
CHD1L-204ENST00000431239 OTUD7AQ8TE49 926 aaPredicted RBP23.06■■□□□ 1.28
CHD1L-204ENST00000431239 KIF2CQ99661 725 aa23.05■■□□□ 1.28
CHD1L-204ENST00000431239 PLEKHG3A1L390 1219 aa23.05■■□□□ 1.28
CHD1L-204ENST00000431239 PTPRUQ92729 1446 aa23.05■■□□□ 1.28
CHD1L-204ENST00000431239 MEIS3Q99687 375 aa23.05■■□□□ 1.28
CHD1L-204ENST00000431239 AMOTL2Q9Y2J4 779 aa23.05■■□□□ 1.28
CHD1L-204ENST00000431239 SMARCA5O60264 1052 aaPredicted RBP23.04■■□□□ 1.28
CHD1L-204ENST00000431239 SLC4A2P04920 1241 aa23.04■■□□□ 1.28
CHD1L-204ENST00000431239 HSP90AA1P07900 732 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms