RNA–Protein interactions for RNA: ENST00000431212.6

NEDD4L-206, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-206ENST00000431212 COL3A1P02461 1466 aaPredicted RBP12.7□□□□□ -0.38
NEDD4L-206ENST00000431212 A0A1W2PP64 1363 aa12.69□□□□□ -0.38
NEDD4L-206ENST00000431212 CYP2E1P05181 493 aaPredicted RBP12.69□□□□□ -0.38
NEDD4L-206ENST00000431212 MRPL50Q8N5N7 158 aaKnown RBP12.69□□□□□ -0.38
NEDD4L-206ENST00000431212 UQCRHLA0A096LP55 91 aa12.69□□□□□ -0.38
NEDD4L-206ENST00000431212 UQCRHP07919 91 aa12.69□□□□□ -0.38
NEDD4L-206ENST00000431212 GSPT1P15170 499 aaKnown RBP12.69□□□□□ -0.38
NEDD4L-206ENST00000431212 SRPK2P78362 688 aaKnown RBP12.69□□□□□ -0.38
NEDD4L-206ENST00000431212 SAFB2Q14151 953 aaKnown RBP eCLIP12.69□□□□□ -0.38
NEDD4L-206ENST00000431212 TULP4Q9NRJ4 1543 aa12.69□□□□□ -0.38
NEDD4L-206ENST00000431212 ZKSCAN5Q9Y2L8 839 aa12.68□□□□□ -0.38
NEDD4L-206ENST00000431212 REREQ9P2R6 1566 aa12.68□□□□□ -0.38
NEDD4L-206ENST00000431212 ST18O60284 1047 aa12.68□□□□□ -0.38
NEDD4L-206ENST00000431212 VAMP4O75379 141 aa12.68□□□□□ -0.38
NEDD4L-206ENST00000431212 FCHSD2O94868 740 aa12.68□□□□□ -0.38
NEDD4L-206ENST00000431212 MCM5P33992 734 aa12.68□□□□□ -0.38
NEDD4L-206ENST00000431212 PIK3R4Q99570 1358 aa12.68□□□□□ -0.38
NEDD4L-206ENST00000431212 PPRC1Q5VV67 1664 aaKnown RBP12.68□□□□□ -0.38
NEDD4L-206ENST00000431212 PKP1Q13835 747 aa12.68□□□□□ -0.38
NEDD4L-206ENST00000431212 PLEKHM2Q8IWE5 1019 aa12.68□□□□□ -0.38
NEDD4L-206ENST00000431212 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.68□□□□□ -0.38
NEDD4L-206ENST00000431212 INTS3Q68E01 1043 aaKnown RBP12.67□□□□□ -0.38
NEDD4L-206ENST00000431212 USP26Q9BXU7 913 aa12.67□□□□□ -0.38
NEDD4L-206ENST00000431212 TERF2IPQ9NYB0 399 aa12.67□□□□□ -0.38
NEDD4L-206ENST00000431212 FYB1O15117 783 aa12.67□□□□□ -0.38
NEDD4L-206ENST00000431212 MTERF4Q7Z6M4 381 aaKnown RBP12.67□□□□□ -0.38
NEDD4L-206ENST00000431212 RBM27Q9P2N5 1060 aaKnown RBP12.67□□□□□ -0.38
NEDD4L-206ENST00000431212 PTCH1Q13635 1447 aa12.67□□□□□ -0.38
NEDD4L-206ENST00000431212 AK9Q5TCS8 1911 aa12.67□□□□□ -0.38
NEDD4L-206ENST00000431212 CASC1Q6TDU7 716 aa12.67□□□□□ -0.38
NEDD4L-206ENST00000431212 CCDC39Q9UFE4 941 aa12.67□□□□□ -0.38
NEDD4L-206ENST00000431212 CHD1O14646 1710 aa12.66□□□□□ -0.38
NEDD4L-206ENST00000431212 TTC22Q5TAA0 569 aa12.66□□□□□ -0.38
NEDD4L-206ENST00000431212 LRSAM1Q6UWE0 723 aa12.66□□□□□ -0.38
NEDD4L-206ENST00000431212 GPT2Q8TD30 523 aa12.66□□□□□ -0.38
NEDD4L-206ENST00000431212 ABCC4O15439 1325 aa12.66□□□□□ -0.38
NEDD4L-206ENST00000431212 PPLO60437 1756 aa12.66□□□□□ -0.38
NEDD4L-206ENST00000431212 UHRF1BP1LA0JNW5 1464 aa12.66□□□□□ -0.38
NEDD4L-206ENST00000431212 DYNC1I1O14576 645 aa12.66□□□□□ -0.38
NEDD4L-206ENST00000431212 PRKAR2BP31323 418 aa12.66□□□□□ -0.38
NEDD4L-206ENST00000431212 ELL2O00472 640 aaPredicted RBP12.65□□□□□ -0.38
NEDD4L-206ENST00000431212 NUTM2DQ5VT03 806 aaPredicted RBP12.65□□□□□ -0.38
NEDD4L-206ENST00000431212 GLI2P10070 1586 aa12.65□□□□□ -0.38
NEDD4L-206ENST00000431212 LMTK2Q8IWU2 1503 aa12.65□□□□□ -0.38
NEDD4L-206ENST00000431212 VGFO15240 615 aaPredicted RBP12.65□□□□□ -0.38
NEDD4L-206ENST00000431212 API5Q9BZZ5 524 aaKnown RBP12.65□□□□□ -0.38
NEDD4L-206ENST00000431212 SYCE3A1L190 88 aa12.65□□□□□ -0.38
NEDD4L-206ENST00000431212 ZGPATQ8N5A5 531 aaKnown RBP12.65□□□□□ -0.38
NEDD4L-206ENST00000431212 TSPYL6Q8N831 410 aa12.65□□□□□ -0.38
NEDD4L-206ENST00000431212 GNAI1P63096 354 aa12.64□□□□□ -0.39
NEDD4L-206ENST00000431212 DCTPP1Q9H773 170 aa12.64□□□□□ -0.39
NEDD4L-206ENST00000431212 THUMPD2Q9BTF0 503 aaKnown RBP12.64□□□□□ -0.39
NEDD4L-206ENST00000431212 PNPLA6Q8IY17 1366 aa12.63□□□□□ -0.39
NEDD4L-206ENST00000431212 NFE2L2Q16236 605 aa12.63□□□□□ -0.39
NEDD4L-206ENST00000431212 SASS6Q6UVJ0 657 aa12.63□□□□□ -0.39
NEDD4L-206ENST00000431212 TMEM63CQ9P1W3 806 aa12.63□□□□□ -0.39
NEDD4L-206ENST00000431212 NPATQ14207 1427 aa12.63□□□□□ -0.39
NEDD4L-206ENST00000431212 MBD3O95983 291 aa12.63□□□□□ -0.39
NEDD4L-206ENST00000431212 IFT57Q9NWB7 429 aa12.63□□□□□ -0.39
NEDD4L-206ENST00000431212 PTMAP06454 111 aaKnown RBP12.62□□□□□ -0.39
NEDD4L-206ENST00000431212 TWISTNBQ3B726 338 aaPredicted RBP12.62□□□□□ -0.39
NEDD4L-206ENST00000431212 C16orf71Q8IYS4 520 aaPredicted RBP12.62□□□□□ -0.39
NEDD4L-206ENST00000431212 STK26Q9P289 416 aa12.62□□□□□ -0.39
NEDD4L-206ENST00000431212 ZDHHC9Q9Y397 364 aa12.62□□□□□ -0.39
NEDD4L-206ENST00000431212 REC8O95072 547 aa12.62□□□□□ -0.39
NEDD4L-206ENST00000431212 GGT6Q6P531 493 aa12.62□□□□□ -0.39
NEDD4L-206ENST00000431212 HDGFL2Q7Z4V5 671 aaPredicted RBP12.62□□□□□ -0.39
NEDD4L-206ENST00000431212 ATAD2Q6PL18 1390 aa12.62□□□□□ -0.39
NEDD4L-206ENST00000431212 MBIPQ9NS73 344 aa12.62□□□□□ -0.39
NEDD4L-206ENST00000431212 ARHGEF28Q8N1W1 1705 aaKnown RBP12.62□□□□□ -0.39
NEDD4L-206ENST00000431212 RNF214Q8ND24 703 aa12.61□□□□□ -0.39
NEDD4L-206ENST00000431212 LRRC7Q96NW7 1537 aa12.61□□□□□ -0.39
NEDD4L-206ENST00000431212 FAM135BQ49AJ0 1406 aa12.61□□□□□ -0.39
NEDD4L-206ENST00000431212 SDSP20132 328 aa12.61□□□□□ -0.39
NEDD4L-206ENST00000431212 PRDM4Q9UKN5 801 aa12.61□□□□□ -0.39
NEDD4L-206ENST00000431212 ABCA9Q8IUA7 1624 aa12.61□□□□□ -0.39
NEDD4L-206ENST00000431212 HMOX1P09601 288 aa12.6□□□□□ -0.39
NEDD4L-206ENST00000431212 FOXD4L5Q5VV16 416 aaPredicted RBP12.6□□□□□ -0.39
NEDD4L-206ENST00000431212 FOXD4L4Q8WXT5 416 aaPredicted RBP12.6□□□□□ -0.39
NEDD4L-206ENST00000431212 PHACTR3Q96KR7 559 aa12.6□□□□□ -0.39
NEDD4L-206ENST00000431212 ARID3AQ99856 593 aa12.6□□□□□ -0.39
NEDD4L-206ENST00000431212 ZFYVE9O95405 1425 aa12.6□□□□□ -0.39
NEDD4L-206ENST00000431212 CFAP65Q6ZU64 1925 aaKnown RBP12.6□□□□□ -0.39
NEDD4L-206ENST00000431212 NSFL1CQ9UNZ2 370 aaKnown RBP12.6□□□□□ -0.39
NEDD4L-206ENST00000431212 KIF24Q5T7B8 1368 aa12.59□□□□□ -0.39
NEDD4L-206ENST00000431212 MINK1Q8N4C8 1332 aaPredicted RBP12.59□□□□□ -0.39
NEDD4L-206ENST00000431212 KIAA2012Q0VF49 1180 aa12.59□□□□□ -0.39
NEDD4L-206ENST00000431212 SMAP1Q8IYB5 467 aaPredicted RBP12.59□□□□□ -0.39
NEDD4L-206ENST00000431212 OTUD7AQ8TE49 926 aaPredicted RBP12.59□□□□□ -0.39
NEDD4L-206ENST00000431212 CHAMP1Q96JM3 812 aa12.59□□□□□ -0.39
NEDD4L-206ENST00000431212 ANKRD44Q8N8A2 993 aa12.59□□□□□ -0.39
NEDD4L-206ENST00000431212 SYAP1Q96A49 352 aaPredicted RBP12.59□□□□□ -0.39
NEDD4L-206ENST00000431212 TSPY26PQ9H489 355 aa12.59□□□□□ -0.39
NEDD4L-206ENST00000431212 APBB1O00213 710 aa12.58□□□□□ -0.4
NEDD4L-206ENST00000431212 ERC2O15083 957 aa12.58□□□□□ -0.4
NEDD4L-206ENST00000431212 ZNF853P0CG23 659 aa12.58□□□□□ -0.4
NEDD4L-206ENST00000431212 DNTTIP2Q5QJE6 756 aaKnown RBP12.58□□□□□ -0.4
NEDD4L-206ENST00000431212 C8orf58Q8NAV2 365 aa12.58□□□□□ -0.4
NEDD4L-206ENST00000431212 RPAP2Q8IXW5 612 aaPredicted RBP12.58□□□□□ -0.4
NEDD4L-206ENST00000431212 SENP3Q9H4L4 574 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms