RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 MARF1Q9Y4F3 1742 aaKnown RBP21.66■■□□□ 1.06
USHBP1-203ENST00000431146 AEBP1Q8IUX7 1158 aa21.65■■□□□ 1.06
USHBP1-203ENST00000431146 FANCIQ9NVI1 1328 aa21.65■■□□□ 1.06
USHBP1-203ENST00000431146 NFE2L2Q16236 605 aa21.64■■□□□ 1.06
USHBP1-203ENST00000431146 BCL2L13Q9BXK5 485 aa21.64■■□□□ 1.05
USHBP1-203ENST00000431146 DLG5Q8TDM6 1919 aa21.63■■□□□ 1.05
USHBP1-203ENST00000431146 RARSP54136 660 aaKnown RBP21.63■■□□□ 1.05
USHBP1-203ENST00000431146 SULT6B1Q6IMI4 303 aa21.63■■□□□ 1.05
USHBP1-203ENST00000431146 ORAI2Q96SN7 254 aa21.63■■□□□ 1.05
USHBP1-203ENST00000431146 THUMPD2Q9BTF0 503 aaKnown RBP21.62■■□□□ 1.05
USHBP1-203ENST00000431146 AMPHP49418 695 aa21.61■■□□□ 1.05
USHBP1-203ENST00000431146 EXOSC9Q06265 439 aaKnown RBP21.61■■□□□ 1.05
USHBP1-203ENST00000431146 PSME1Q06323 249 aa21.61■■□□□ 1.05
USHBP1-203ENST00000431146 FRAT1Q92837 279 aaPredicted RBP21.61■■□□□ 1.05
USHBP1-203ENST00000431146 STRCP1A6NGW2 1772 aa21.6■■□□□ 1.05
USHBP1-203ENST00000431146 XPCQ01831 940 aaPredicted RBP21.6■■□□□ 1.05
USHBP1-203ENST00000431146 CANXP27824 592 aaKnown RBP21.59■■□□□ 1.05
USHBP1-203ENST00000431146 LAS1LQ9Y4W2 734 aaKnown RBP21.59■■□□□ 1.05
USHBP1-203ENST00000431146 SBNO1A3KN83 1393 aa21.59■■□□□ 1.05
USHBP1-203ENST00000431146 FLT4P35916 1363 aa21.59■■□□□ 1.05
USHBP1-203ENST00000431146 IL16Q14005 1332 aa21.59■■□□□ 1.05
USHBP1-203ENST00000431146 RGPD1P0DJD0 1748 aa21.58■■□□□ 1.05
USHBP1-203ENST00000431146 KDM4FA0A1W2PPD8 638 aa21.58■■□□□ 1.05
USHBP1-203ENST00000431146 FOXO3O43524 673 aa21.58■■□□□ 1.05
USHBP1-203ENST00000431146 FAM83GA6ND36 823 aa21.56■■□□□ 1.04
USHBP1-203ENST00000431146 PLEKHG5O94827 1062 aa21.56■■□□□ 1.04
USHBP1-203ENST00000431146 USP54Q70EL1 1684 aa21.56■■□□□ 1.04
USHBP1-203ENST00000431146 PANK1Q8TE04 598 aa21.56■■□□□ 1.04
USHBP1-203ENST00000431146 TNNQ9UQP3 1299 aa21.55■■□□□ 1.04
USHBP1-203ENST00000431146 DCTN1Q14203 1278 aa21.55■■□□□ 1.04
USHBP1-203ENST00000431146 C19orf44Q9H6X5 657 aa21.54■■□□□ 1.04
USHBP1-203ENST00000431146 HOXC9P31274 260 aa21.53■■□□□ 1.04
USHBP1-203ENST00000431146 TMEM94Q12767 1356 aa21.53■■□□□ 1.04
USHBP1-203ENST00000431146 LTN1O94822 1766 aa21.52■■□□□ 1.04
USHBP1-203ENST00000431146 LTV1Q96GA3 475 aaPredicted RBP21.52■■□□□ 1.03
USHBP1-203ENST00000431146 EYA1Q99502 592 aa21.52■■□□□ 1.03
USHBP1-203ENST00000431146 COG6Q9Y2V7 657 aa21.52■■□□□ 1.03
USHBP1-203ENST00000431146 LMOD2Q6P5Q4 547 aa21.51■■□□□ 1.03
USHBP1-203ENST00000431146 RBM19Q9Y4C8 960 aaKnown RBP21.51■■□□□ 1.03
USHBP1-203ENST00000431146 C1orf167Q5SNV9 1468 aa21.51■■□□□ 1.03
USHBP1-203ENST00000431146 PDE3AQ14432 1141 aa21.5■■□□□ 1.03
USHBP1-203ENST00000431146 ARHGEF10O15013 1369 aa21.5■■□□□ 1.03
USHBP1-203ENST00000431146 ZBTB7CA1YPR0 619 aa21.5■■□□□ 1.03
USHBP1-203ENST00000431146 CLUAP1Q96AJ1 413 aa21.5■■□□□ 1.03
USHBP1-203ENST00000431146 RLBP1P12271 317 aa21.49■■□□□ 1.03
USHBP1-203ENST00000431146 SMC4Q9NTJ3 1288 aa21.49■■□□□ 1.03
USHBP1-203ENST00000431146 CT47B1P0C2W7 299 aaPredicted RBP21.49■■□□□ 1.03
USHBP1-203ENST00000431146 LMOD3Q0VAK6 560 aa21.49■■□□□ 1.03
USHBP1-203ENST00000431146 SSH1Q8WYL5 1049 aa21.49■■□□□ 1.03
USHBP1-203ENST00000431146 LMTK3Q96Q04 1460 aa21.48■■□□□ 1.03
USHBP1-203ENST00000431146 ATF3P18847 181 aa21.47■■□□□ 1.03
USHBP1-203ENST00000431146 MBIPQ9NS73 344 aa21.47■■□□□ 1.03
USHBP1-203ENST00000431146 IGSF1Q8N6C5 1336 aa21.47■■□□□ 1.03
USHBP1-203ENST00000431146 NFAT5O94916 1531 aa21.47■■□□□ 1.03
USHBP1-203ENST00000431146 CALD1Q05682 793 aaKnown RBP21.47■■□□□ 1.03
USHBP1-203ENST00000431146 MCM10Q7L590 875 aa21.47■■□□□ 1.03
USHBP1-203ENST00000431146 SKAP1Q86WV1 359 aa21.47■■□□□ 1.03
USHBP1-203ENST00000431146 IFT57Q9NWB7 429 aa21.47■■□□□ 1.03
USHBP1-203ENST00000431146 GNAI1P63096 354 aa21.46■■□□□ 1.03
USHBP1-203ENST00000431146 KRT28Q7Z3Y7 464 aa21.46■■□□□ 1.03
USHBP1-203ENST00000431146 DDX17Q92841 729 aaKnown RBP21.46■■□□□ 1.03
USHBP1-203ENST00000431146 ZNF853P0CG23 659 aa21.46■■□□□ 1.03
USHBP1-203ENST00000431146 STRCQ7RTU9 1775 aa21.45■■□□□ 1.03
USHBP1-203ENST00000431146 KDRP35968 1356 aa21.45■■□□□ 1.02
USHBP1-203ENST00000431146 MST1RQ04912 1400 aa21.45■■□□□ 1.02
USHBP1-203ENST00000431146 TRPM3Q9HCF6 1732 aaPredicted RBP21.45■■□□□ 1.02
USHBP1-203ENST00000431146 ELL2O00472 640 aaPredicted RBP21.44■■□□□ 1.02
USHBP1-203ENST00000431146 MTHFSDQ2M296 383 aaKnown RBP21.44■■□□□ 1.02
USHBP1-203ENST00000431146 TSPYL6Q8N831 410 aa21.44■■□□□ 1.02
USHBP1-203ENST00000431146 KIF24Q5T7B8 1368 aa21.44■■□□□ 1.02
USHBP1-203ENST00000431146 KIF1AQ12756 1690 aa21.44■■□□□ 1.02
USHBP1-203ENST00000431146 USHBP1Q8N6Y0 703 aa21.44■■□□□ 1.02
USHBP1-203ENST00000431146 CFAP44Q96MT7 982 aa21.44■■□□□ 1.02
USHBP1-203ENST00000431146 KDM2BQ8NHM5 1336 aa21.43■■□□□ 1.02
USHBP1-203ENST00000431146 ZKSCAN2Q63HK3 967 aa21.43■■□□□ 1.02
USHBP1-203ENST00000431146 KCNH5Q8NCM2 988 aa21.41■■□□□ 1.02
USHBP1-203ENST00000431146 IP6K1Q92551 441 aa21.41■■□□□ 1.02
USHBP1-203ENST00000431146 NOB1Q9ULX3 412 aaKnown RBP21.41■■□□□ 1.02
USHBP1-203ENST00000431146 RTL1A6NKG5 1358 aa21.41■■□□□ 1.02
USHBP1-203ENST00000431146 GCP02774 474 aa21.41■■□□□ 1.02
USHBP1-203ENST00000431146 XIRP1Q702N8 1843 aaKnown RBP21.4■■□□□ 1.02
USHBP1-203ENST00000431146 VAMP4O75379 141 aa21.4■■□□□ 1.02
USHBP1-203ENST00000431146 TRIM27P14373 513 aa21.4■■□□□ 1.02
USHBP1-203ENST00000431146 FTSJ3Q8IY81 847 aaKnown RBP21.4■■□□□ 1.02
USHBP1-203ENST00000431146 ANP32EQ9BTT0 268 aa21.4■■□□□ 1.02
USHBP1-203ENST00000431146 TCERG1O14776 1098 aaKnown RBP21.39■■□□□ 1.01
USHBP1-203ENST00000431146 C8orf58Q8NAV2 365 aa21.39■■□□□ 1.01
USHBP1-203ENST00000431146 RGPD2P0DJD1 1756 aa21.39■■□□□ 1.01
USHBP1-203ENST00000431146 DZIP1LQ8IYY4 767 aaKnown RBP21.38■■□□□ 1.01
USHBP1-203ENST00000431146 CENPQQ7L2Z9 268 aaPredicted RBP21.38■■□□□ 1.01
USHBP1-203ENST00000431146 DCCP43146 1447 aa21.38■■□□□ 1.01
USHBP1-203ENST00000431146 SLIT3O75094 1523 aa21.37■■□□□ 1.01
USHBP1-203ENST00000431146 TWISTNBQ3B726 338 aaPredicted RBP21.37■■□□□ 1.01
USHBP1-203ENST00000431146 ALDH1L2Q3SY69 923 aa21.37■■□□□ 1.01
USHBP1-203ENST00000431146 ATF7IPQ6VMQ6 1270 aa21.37■■□□□ 1.01
USHBP1-203ENST00000431146 CADPS2Q86UW7 1296 aa21.37■■□□□ 1.01
USHBP1-203ENST00000431146 MSH6P52701 1360 aa21.36■■□□□ 1.01
USHBP1-203ENST00000431146 ZNF335Q9H4Z2 1342 aaPredicted RBP21.36■■□□□ 1.01
USHBP1-203ENST00000431146 NCOA3Q9Y6Q9 1424 aa21.36■■□□□ 1.01
USHBP1-203ENST00000431146 IGHDP01880 384 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms