RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 PDE4CQ08493 712 aa16.8■□□□□ 0.28
SNRNP200-202ENST00000429650 CDK12Q9NYV4 1490 aaPredicted RBP16.79■□□□□ 0.28
SNRNP200-202ENST00000429650 IL13P35225 146 aa16.79■□□□□ 0.28
SNRNP200-202ENST00000429650 NUCB1Q02818 461 aa16.79■□□□□ 0.28
SNRNP200-202ENST00000429650 THUMPD2Q9BTF0 503 aaKnown RBP16.79■□□□□ 0.28
SNRNP200-202ENST00000429650 WASLO00401 505 aaPredicted RBP16.79■□□□□ 0.28
SNRNP200-202ENST00000429650 MLECQ14165 292 aa16.79■□□□□ 0.28
SNRNP200-202ENST00000429650 VAMP4O75379 141 aa16.78■□□□□ 0.28
SNRNP200-202ENST00000429650 CALD1Q05682 793 aaKnown RBP16.78■□□□□ 0.28
SNRNP200-202ENST00000429650 NME9Q86XW9 330 aa16.78■□□□□ 0.28
SNRNP200-202ENST00000429650 PTCH1Q13635 1447 aa16.78■□□□□ 0.28
SNRNP200-202ENST00000429650 AATKQ6ZMQ8 1374 aa16.77■□□□□ 0.28
SNRNP200-202ENST00000429650 MRPL50Q8N5N7 158 aaKnown RBP16.77■□□□□ 0.28
SNRNP200-202ENST00000429650 IFT57Q9NWB7 429 aa16.77■□□□□ 0.28
SNRNP200-202ENST00000429650 PIK3R4Q99570 1358 aa16.77■□□□□ 0.27
SNRNP200-202ENST00000429650 ZRANB1Q9UGI0 708 aa16.77■□□□□ 0.27
SNRNP200-202ENST00000429650 METP08581 1390 aa16.76■□□□□ 0.27
SNRNP200-202ENST00000429650 GNAI1P63096 354 aa16.76■□□□□ 0.27
SNRNP200-202ENST00000429650 TSPYL6Q8N831 410 aa16.76■□□□□ 0.27
SNRNP200-202ENST00000429650 ARHGAP45Q92619 1136 aa16.76■□□□□ 0.27
SNRNP200-202ENST00000429650 DLG5Q8TDM6 1919 aa16.76■□□□□ 0.27
SNRNP200-202ENST00000429650 MON2Q7Z3U7 1717 aa16.76■□□□□ 0.27
SNRNP200-202ENST00000429650 ZBTB7BO15156 539 aaPredicted RBP16.76■□□□□ 0.27
SNRNP200-202ENST00000429650 ZNF853P0CG23 659 aa16.76■□□□□ 0.27
SNRNP200-202ENST00000429650 LNPKQ9C0E8 428 aa16.76■□□□□ 0.27
SNRNP200-202ENST00000429650 CHD1LQ86WJ1 897 aa16.75■□□□□ 0.27
SNRNP200-202ENST00000429650 MBIPQ9NS73 344 aa16.75■□□□□ 0.27
SNRNP200-202ENST00000429650 CPS1P31327 1500 aa16.75■□□□□ 0.27
SNRNP200-202ENST00000429650 NUDT16Q96DE0 195 aaKnown RBP16.74■□□□□ 0.27
SNRNP200-202ENST00000429650 KNDC1Q76NI1 1749 aa16.74■□□□□ 0.27
SNRNP200-202ENST00000429650 TXNDC2Q86VQ3 553 aa16.73■□□□□ 0.27
SNRNP200-202ENST00000429650 CHMP4BQ9H444 224 aaKnown RBP16.73■□□□□ 0.27
SNRNP200-202ENST00000429650 SPRYD3Q8NCJ5 442 aa16.73■□□□□ 0.27
SNRNP200-202ENST00000429650 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.73■□□□□ 0.27
SNRNP200-202ENST00000429650 COG3Q96JB2 828 aa16.73■□□□□ 0.27
SNRNP200-202ENST00000429650 ABCC4O15439 1325 aa16.72■□□□□ 0.27
SNRNP200-202ENST00000429650 NCKAP5LQ9HCH0 1330 aa16.72■□□□□ 0.27
SNRNP200-202ENST00000429650 AKAP12Q02952 1782 aa16.72■□□□□ 0.27
SNRNP200-202ENST00000429650 ELL2O00472 640 aaPredicted RBP16.72■□□□□ 0.27
SNRNP200-202ENST00000429650 CCDC61Q9Y6R9 512 aa16.72■□□□□ 0.27
SNRNP200-202ENST00000429650 C3P01024 1663 aa16.72■□□□□ 0.27
SNRNP200-202ENST00000429650 TECPR2O15040 1411 aa16.71■□□□□ 0.27
SNRNP200-202ENST00000429650 LMOD3Q0VAK6 560 aa16.71■□□□□ 0.27
SNRNP200-202ENST00000429650 RRS1Q15050 365 aaKnown RBP16.71■□□□□ 0.27
SNRNP200-202ENST00000429650 GCC1Q96CN9 775 aa16.71■□□□□ 0.27
SNRNP200-202ENST00000429650 CFAP44Q96MT7 982 aa16.71■□□□□ 0.27
SNRNP200-202ENST00000429650 TWISTNBQ3B726 338 aaPredicted RBP16.71■□□□□ 0.27
SNRNP200-202ENST00000429650 C1orf115Q9H7X2 142 aa16.71■□□□□ 0.27
SNRNP200-202ENST00000429650 ITSN1Q15811 1721 aa16.71■□□□□ 0.27
SNRNP200-202ENST00000429650 RBM25P49756 843 aaKnown RBP16.7■□□□□ 0.26
SNRNP200-202ENST00000429650 BMP2KLQ5H9B9 411 aa16.7■□□□□ 0.26
SNRNP200-202ENST00000429650 SIRT1Q96EB6 747 aa16.7■□□□□ 0.26
SNRNP200-202ENST00000429650 ANKRD45Q5TZF3 282 aa16.69■□□□□ 0.26
SNRNP200-202ENST00000429650 C8orf58Q8NAV2 365 aa16.69■□□□□ 0.26
SNRNP200-202ENST00000429650 CHMP5Q9NZZ3 219 aa16.69■□□□□ 0.26
SNRNP200-202ENST00000429650 FAM83GA6ND36 823 aa16.68■□□□□ 0.26
SNRNP200-202ENST00000429650 HSCBQ8IWL3 235 aa16.68■□□□□ 0.26
SNRNP200-202ENST00000429650 SIRT2Q8IXJ6 389 aa16.68■□□□□ 0.26
SNRNP200-202ENST00000429650 NRKQ7Z2Y5 1582 aa16.67■□□□□ 0.26
SNRNP200-202ENST00000429650 MCM4P33991 863 aa16.67■□□□□ 0.26
SNRNP200-202ENST00000429650 PRR36Q9H6K5 1346 aa16.67■□□□□ 0.26
SNRNP200-202ENST00000429650 ZNF692Q9BU19 519 aaPredicted RBP16.66■□□□□ 0.26
SNRNP200-202ENST00000429650 API5Q9BZZ5 524 aaKnown RBP16.66■□□□□ 0.26
SNRNP200-202ENST00000429650 NCOA3Q9Y6Q9 1424 aa16.66■□□□□ 0.26
SNRNP200-202ENST00000429650 DCTN1Q14203 1278 aa16.66■□□□□ 0.26
SNRNP200-202ENST00000429650 SNX21Q969T3 373 aa16.66■□□□□ 0.26
SNRNP200-202ENST00000429650 HDGFP51858 240 aaKnown RBP16.64■□□□□ 0.25
SNRNP200-202ENST00000429650 KIF24Q5T7B8 1368 aa16.63■□□□□ 0.25
SNRNP200-202ENST00000429650 DDIT3P35638 169 aa16.63■□□□□ 0.25
SNRNP200-202ENST00000429650 EIF4A2Q14240 407 aaKnown RBP16.63■□□□□ 0.25
SNRNP200-202ENST00000429650 AEBP1Q8IUX7 1158 aa16.63■□□□□ 0.25
SNRNP200-202ENST00000429650 ESF1Q9H501 851 aaKnown RBP16.63■□□□□ 0.25
SNRNP200-202ENST00000429650 ROBO2Q9HCK4 1378 aa16.62■□□□□ 0.25
SNRNP200-202ENST00000429650 L1TD1Q5T7N2 865 aaKnown RBP16.62■□□□□ 0.25
SNRNP200-202ENST00000429650 TBC1D9Q6ZT07 1266 aa16.62■□□□□ 0.25
SNRNP200-202ENST00000429650 KIF2CQ99661 725 aa16.62■□□□□ 0.25
SNRNP200-202ENST00000429650 SULT6B1Q6IMI4 303 aa16.61■□□□□ 0.25
SNRNP200-202ENST00000429650 TNRQ92752 1358 aa16.61■□□□□ 0.25
SNRNP200-202ENST00000429650 TTC21BQ7Z4L5 1316 aa16.61■□□□□ 0.25
SNRNP200-202ENST00000429650 TMEM2Q9UHN6 1383 aa16.61■□□□□ 0.25
SNRNP200-202ENST00000429650 UBR1Q8IWV7 1749 aa16.6■□□□□ 0.25
SNRNP200-202ENST00000429650 OVOS2A0A0J9YW53 1432 aa16.6■□□□□ 0.25
SNRNP200-202ENST00000429650 OVOS2Q6IE36 1432 aa16.6■□□□□ 0.25
SNRNP200-202ENST00000429650 TOPAZ1Q8N9V7 1692 aa16.6■□□□□ 0.25
SNRNP200-202ENST00000429650 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.6■□□□□ 0.25
SNRNP200-202ENST00000429650 ADAMTS13Q76LX8 1427 aa16.59■□□□□ 0.25
SNRNP200-202ENST00000429650 NUTM2FA1L443 756 aa16.59■□□□□ 0.25
SNRNP200-202ENST00000429650 INTS3Q68E01 1043 aaKnown RBP16.59■□□□□ 0.25
SNRNP200-202ENST00000429650 RGS12O14924 1447 aa16.59■□□□□ 0.25
SNRNP200-202ENST00000429650 ACEP12821 1306 aa16.58■□□□□ 0.25
SNRNP200-202ENST00000429650 KRT24Q2M2I5 525 aa16.58■□□□□ 0.25
SNRNP200-202ENST00000429650 NALCNQ8IZF0 1738 aa16.58■□□□□ 0.24
SNRNP200-202ENST00000429650 PEAK1Q9H792 1746 aa16.58■□□□□ 0.24
SNRNP200-202ENST00000429650 CHL1O00533 1208 aa16.58■□□□□ 0.24
SNRNP200-202ENST00000429650 TRAK2O60296 914 aa16.58■□□□□ 0.24
SNRNP200-202ENST00000429650 DCTPP1Q9H773 170 aa16.58■□□□□ 0.24
SNRNP200-202ENST00000429650 RGPD1P0DJD0 1748 aa16.58■□□□□ 0.24
SNRNP200-202ENST00000429650 HSP90AB1P08238 724 aaKnown RBP16.57■□□□□ 0.24
SNRNP200-202ENST00000429650 FSD2A1L4K1 749 aa16.57■□□□□ 0.24
SNRNP200-202ENST00000429650 CDC45O75419 566 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms