RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 IFT57Q9NWB7 429 aa14.46□□□□□ -0.09
LINC01238-203ENST00000429456 RBM25P49756 843 aaKnown RBP14.46□□□□□ -0.1
LINC01238-203ENST00000429456 GNAI1P63096 354 aa14.46□□□□□ -0.1
LINC01238-203ENST00000429456 LNPKQ9C0E8 428 aa14.46□□□□□ -0.1
LINC01238-203ENST00000429456 CHMP4BQ9H444 224 aaKnown RBP14.46□□□□□ -0.1
LINC01238-203ENST00000429456 CHMP5Q9NZZ3 219 aa14.46□□□□□ -0.1
LINC01238-203ENST00000429456 AATKQ6ZMQ8 1374 aa14.45□□□□□ -0.1
LINC01238-203ENST00000429456 SPRYD3Q8NCJ5 442 aa14.45□□□□□ -0.1
LINC01238-203ENST00000429456 EMILIN1Q9Y6C2 1016 aa14.45□□□□□ -0.1
LINC01238-203ENST00000429456 MCM4P33991 863 aa14.44□□□□□ -0.1
LINC01238-203ENST00000429456 TSPYL6Q8N831 410 aa14.44□□□□□ -0.1
LINC01238-203ENST00000429456 THUMPD2Q9BTF0 503 aaKnown RBP14.44□□□□□ -0.1
LINC01238-203ENST00000429456 DLG5Q8TDM6 1919 aa14.44□□□□□ -0.1
LINC01238-203ENST00000429456 WASLO00401 505 aaPredicted RBP14.44□□□□□ -0.1
LINC01238-203ENST00000429456 GCC1Q96CN9 775 aa14.44□□□□□ -0.1
LINC01238-203ENST00000429456 NRXN3Q9Y4C0 1643 aa14.44□□□□□ -0.1
LINC01238-203ENST00000429456 BMP2KLQ5H9B9 411 aa14.43□□□□□ -0.1
LINC01238-203ENST00000429456 HSCBQ8IWL3 235 aa14.43□□□□□ -0.1
LINC01238-203ENST00000429456 MBIPQ9NS73 344 aa14.43□□□□□ -0.1
LINC01238-203ENST00000429456 ABCC4O15439 1325 aa14.43□□□□□ -0.1
LINC01238-203ENST00000429456 NCOA3Q9Y6Q9 1424 aa14.43□□□□□ -0.1
LINC01238-203ENST00000429456 NME9Q86XW9 330 aa14.43□□□□□ -0.1
LINC01238-203ENST00000429456 SNX21Q969T3 373 aa14.43□□□□□ -0.1
LINC01238-203ENST00000429456 L1TD1Q5T7N2 865 aaKnown RBP14.42□□□□□ -0.1
LINC01238-203ENST00000429456 ZNF692Q9BU19 519 aaPredicted RBP14.42□□□□□ -0.1
LINC01238-203ENST00000429456 MON2Q7Z3U7 1717 aa14.42□□□□□ -0.1
LINC01238-203ENST00000429456 LMOD3Q0VAK6 560 aa14.41□□□□□ -0.1
LINC01238-203ENST00000429456 ANKRD45Q5TZF3 282 aa14.41□□□□□ -0.1
LINC01238-203ENST00000429456 CFAP44Q96MT7 982 aa14.41□□□□□ -0.1
LINC01238-203ENST00000429456 ZRANB1Q9UGI0 708 aa14.41□□□□□ -0.1
LINC01238-203ENST00000429456 CPS1P31327 1500 aa14.4□□□□□ -0.1
LINC01238-203ENST00000429456 DDIT3P35638 169 aa14.4□□□□□ -0.1
LINC01238-203ENST00000429456 KNDC1Q76NI1 1749 aa14.4□□□□□ -0.1
LINC01238-203ENST00000429456 TWISTNBQ3B726 338 aaPredicted RBP14.4□□□□□ -0.1
LINC01238-203ENST00000429456 SIRT2Q8IXJ6 389 aa14.4□□□□□ -0.1
LINC01238-203ENST00000429456 FAM43AQ8N2R8 423 aa14.4□□□□□ -0.1
LINC01238-203ENST00000429456 C1orf115Q9H7X2 142 aa14.4□□□□□ -0.1
LINC01238-203ENST00000429456 AKAP12Q02952 1782 aa14.4□□□□□ -0.1
LINC01238-203ENST00000429456 METP08581 1390 aa14.39□□□□□ -0.11
LINC01238-203ENST00000429456 DIP2BQ9P265 1576 aa14.39□□□□□ -0.11
LINC01238-203ENST00000429456 NUDT16Q96DE0 195 aaKnown RBP14.39□□□□□ -0.11
LINC01238-203ENST00000429456 C3P01024 1663 aa14.39□□□□□ -0.11
LINC01238-203ENST00000429456 ELL2O00472 640 aaPredicted RBP14.39□□□□□ -0.11
LINC01238-203ENST00000429456 FAM69CQ0P6D2 419 aa14.39□□□□□ -0.11
LINC01238-203ENST00000429456 C8orf58Q8NAV2 365 aa14.39□□□□□ -0.11
LINC01238-203ENST00000429456 SIRT1Q96EB6 747 aa14.39□□□□□ -0.11
LINC01238-203ENST00000429456 COG3Q96JB2 828 aa14.39□□□□□ -0.11
LINC01238-203ENST00000429456 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.38□□□□□ -0.11
LINC01238-203ENST00000429456 API5Q9BZZ5 524 aaKnown RBP14.38□□□□□ -0.11
LINC01238-203ENST00000429456 KIF24Q5T7B8 1368 aa14.38□□□□□ -0.11
LINC01238-203ENST00000429456 FSD2A1L4K1 749 aa14.37□□□□□ -0.11
LINC01238-203ENST00000429456 CCDC61Q9Y6R9 512 aa14.37□□□□□ -0.11
LINC01238-203ENST00000429456 TECPR2O15040 1411 aa14.37□□□□□ -0.11
LINC01238-203ENST00000429456 TSPOAP1O95153 1857 aa14.37□□□□□ -0.11
LINC01238-203ENST00000429456 RRS1Q15050 365 aaKnown RBP14.37□□□□□ -0.11
LINC01238-203ENST00000429456 TXNDC2Q86VQ3 553 aa14.37□□□□□ -0.11
LINC01238-203ENST00000429456 KIF2CQ99661 725 aa14.37□□□□□ -0.11
LINC01238-203ENST00000429456 ITSN1Q15811 1721 aa14.37□□□□□ -0.11
LINC01238-203ENST00000429456 NRKQ7Z2Y5 1582 aa14.36□□□□□ -0.11
LINC01238-203ENST00000429456 TRAK2O60296 914 aa14.36□□□□□ -0.11
LINC01238-203ENST00000429456 CYB5RLQ6IPT4 315 aa14.36□□□□□ -0.11
LINC01238-203ENST00000429456 NCKAP5LQ9HCH0 1330 aa14.36□□□□□ -0.11
LINC01238-203ENST00000429456 FAM83GA6ND36 823 aa14.35□□□□□ -0.11
LINC01238-203ENST00000429456 TBC1D9Q6ZT07 1266 aa14.35□□□□□ -0.11
LINC01238-203ENST00000429456 CIZ1Q9ULV3 898 aaPredicted RBP14.35□□□□□ -0.11
LINC01238-203ENST00000429456 GOLGA6L3A6NEY3 463 aa14.34□□□□□ -0.11
LINC01238-203ENST00000429456 DDX11L8A8MPP1 907 aa14.34□□□□□ -0.11
LINC01238-203ENST00000429456 XRCC6P12956 609 aaKnown RBP eCLIP14.33□□□□□ -0.11
LINC01238-203ENST00000429456 DCTN1Q14203 1278 aa14.33□□□□□ -0.11
LINC01238-203ENST00000429456 PRR36Q9H6K5 1346 aa14.33□□□□□ -0.12
LINC01238-203ENST00000429456 HSP90AB1P08238 724 aaKnown RBP14.33□□□□□ -0.12
LINC01238-203ENST00000429456 MLECQ14165 292 aa14.33□□□□□ -0.12
LINC01238-203ENST00000429456 INTS3Q68E01 1043 aaKnown RBP14.32□□□□□ -0.12
LINC01238-203ENST00000429456 GZF1Q9H116 711 aaPredicted RBP14.32□□□□□ -0.12
LINC01238-203ENST00000429456 DCTPP1Q9H773 170 aa14.32□□□□□ -0.12
LINC01238-203ENST00000429456 CDC45O75419 566 aa14.32□□□□□ -0.12
LINC01238-203ENST00000429456 RAB3GAP1Q15042 981 aa14.31□□□□□ -0.12
LINC01238-203ENST00000429456 PLEKHM2Q8IWE5 1019 aa14.31□□□□□ -0.12
LINC01238-203ENST00000429456 TNPO1Q92973 898 aaKnown RBP14.31□□□□□ -0.12
LINC01238-203ENST00000429456 PODXL2Q9NZ53 605 aa14.31□□□□□ -0.12
LINC01238-203ENST00000429456 CD2BP2O95400 341 aaKnown RBP14.3□□□□□ -0.12
LINC01238-203ENST00000429456 GSPT1P15170 499 aaKnown RBP14.3□□□□□ -0.12
LINC01238-203ENST00000429456 EIF4A2Q14240 407 aaKnown RBP14.3□□□□□ -0.12
LINC01238-203ENST00000429456 RGS12O14924 1447 aa14.3□□□□□ -0.12
LINC01238-203ENST00000429456 CHL1O00533 1208 aa14.3□□□□□ -0.12
LINC01238-203ENST00000429456 HDGFP51858 240 aaKnown RBP14.3□□□□□ -0.12
LINC01238-203ENST00000429456 AEBP1Q8IUX7 1158 aa14.3□□□□□ -0.12
LINC01238-203ENST00000429456 K7ELQ4 463 aaPredicted RBP14.29□□□□□ -0.12
LINC01238-203ENST00000429456 HAP1P54257 671 aaPredicted RBP14.29□□□□□ -0.12
LINC01238-203ENST00000429456 KIAA0232Q92628 1395 aa14.29□□□□□ -0.12
LINC01238-203ENST00000429456 TTC21BQ7Z4L5 1316 aa14.29□□□□□ -0.12
LINC01238-203ENST00000429456 ATP10DQ9P241 1426 aa14.29□□□□□ -0.12
LINC01238-203ENST00000429456 SULT6B1Q6IMI4 303 aa14.29□□□□□ -0.12
LINC01238-203ENST00000429456 ANKRD44Q8N8A2 993 aa14.29□□□□□ -0.12
LINC01238-203ENST00000429456 OVOS2A0A0J9YW53 1432 aa14.28□□□□□ -0.12
LINC01238-203ENST00000429456 OVOS2Q6IE36 1432 aa14.28□□□□□ -0.12
LINC01238-203ENST00000429456 TOPAZ1Q8N9V7 1692 aa14.28□□□□□ -0.12
LINC01238-203ENST00000429456 RGPD1P0DJD0 1748 aa14.28□□□□□ -0.12
LINC01238-203ENST00000429456 ROBO2Q9HCK4 1378 aa14.27□□□□□ -0.12
LINC01238-203ENST00000429456 MRE11P49959 708 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms