RNA–Protein interactions for RNA: ENST00000429433.3

BEND3-202, Transcript of BEN domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEND3, Length 6,654 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEND3-202ENST00000429433 ZFYVE27Q5T4F4 411 aa12.42□□□□□ -0.42
BEND3-202ENST00000429433 UBXN4Q92575 508 aa12.42□□□□□ -0.42
BEND3-202ENST00000429433 SYTL4Q96C24 671 aaPredicted RBP12.42□□□□□ -0.42
BEND3-202ENST00000429433 FAM177BA6PVY3 158 aa12.42□□□□□ -0.42
BEND3-202ENST00000429433 WDR63Q8IWG1 891 aa12.42□□□□□ -0.42
BEND3-202ENST00000429433 FAM107BQ9H098 131 aa12.42□□□□□ -0.42
BEND3-202ENST00000429433 JPH4Q96JJ6 628 aa12.42□□□□□ -0.42
BEND3-202ENST00000429433 SLC3A2P08195 630 aaKnown RBP12.42□□□□□ -0.42
BEND3-202ENST00000429433 CDK5RAP3Q96JB5 506 aa12.41□□□□□ -0.42
BEND3-202ENST00000429433 CCT4P50991 539 aaKnown RBP12.41□□□□□ -0.42
BEND3-202ENST00000429433 FAM177A1Q8N128 213 aaPredicted RBP12.41□□□□□ -0.42
BEND3-202ENST00000429433 EZRP15311 586 aaKnown RBP12.41□□□□□ -0.42
BEND3-202ENST00000429433 NUP62CLQ9H1M0 184 aa12.41□□□□□ -0.42
BEND3-202ENST00000429433 MCM3P25205 808 aa12.41□□□□□ -0.42
BEND3-202ENST00000429433 TMCO3Q6UWJ1 677 aa12.41□□□□□ -0.42
BEND3-202ENST00000429433 CALCOCO1Q9P1Z2 691 aa12.41□□□□□ -0.42
BEND3-202ENST00000429433 MCM5P33992 734 aa12.4□□□□□ -0.42
BEND3-202ENST00000429433 CFAP70Q5T0N1 1121 aa12.4□□□□□ -0.42
BEND3-202ENST00000429433 TRIM22Q8IYM9 498 aa12.4□□□□□ -0.42
BEND3-202ENST00000429433 SLC12A5Q9H2X9 1139 aa12.4□□□□□ -0.42
BEND3-202ENST00000429433 PPP2R1AP30153 589 aa12.4□□□□□ -0.42
BEND3-202ENST00000429433 KRT32Q14532 448 aa12.4□□□□□ -0.42
BEND3-202ENST00000429433 CDKL5O76039 1030 aa12.39□□□□□ -0.43
BEND3-202ENST00000429433 PDCL3Q9H2J4 239 aa12.39□□□□□ -0.43
BEND3-202ENST00000429433 LRRCC1Q9C099 1032 aa12.39□□□□□ -0.43
BEND3-202ENST00000429433 NEFHP12036 1026 aa12.39□□□□□ -0.43
BEND3-202ENST00000429433 SEPT7Q16181 437 aaKnown RBP12.39□□□□□ -0.43
BEND3-202ENST00000429433 RAPGEF4Q8WZA2 1011 aa12.39□□□□□ -0.43
BEND3-202ENST00000429433 MIS18AQ9NYP9 233 aa12.39□□□□□ -0.43
BEND3-202ENST00000429433 ME1P48163 572 aa12.39□□□□□ -0.43
BEND3-202ENST00000429433 LARP1BQ659C4 914 aaKnown RBP12.39□□□□□ -0.43
BEND3-202ENST00000429433 THUMPD2Q9BTF0 503 aaKnown RBP12.39□□□□□ -0.43
BEND3-202ENST00000429433 MAP9Q49MG5 647 aa12.39□□□□□ -0.43
BEND3-202ENST00000429433 ATAD2BQ9ULI0 1458 aa12.38□□□□□ -0.43
BEND3-202ENST00000429433 ZSCAN12O43309 604 aa12.38□□□□□ -0.43
BEND3-202ENST00000429433 FILIP1Q7Z7B0 1213 aa12.38□□□□□ -0.43
BEND3-202ENST00000429433 TWISTNBQ3B726 338 aaPredicted RBP12.38□□□□□ -0.43
BEND3-202ENST00000429433 EVA1CP58658 441 aa12.38□□□□□ -0.43
BEND3-202ENST00000429433 UPF3BQ9BZI7 483 aaKnown RBP12.38□□□□□ -0.43
BEND3-202ENST00000429433 NOL7Q9UMY1 257 aaKnown RBP12.38□□□□□ -0.43
BEND3-202ENST00000429433 NEMFO60524 1076 aa12.38□□□□□ -0.43
BEND3-202ENST00000429433 MVPQ14764 893 aaKnown RBP12.38□□□□□ -0.43
BEND3-202ENST00000429433 SPATA32Q96LK8 384 aa12.38□□□□□ -0.43
BEND3-202ENST00000429433 SHTN1A0MZ66 631 aa12.38□□□□□ -0.43
BEND3-202ENST00000429433 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.37□□□□□ -0.43
BEND3-202ENST00000429433 RRBP1Q9P2E9 1410 aaKnown RBP12.37□□□□□ -0.43
BEND3-202ENST00000429433 CGNQ9P2M7 1197 aaKnown RBP12.37□□□□□ -0.43
BEND3-202ENST00000429433 BRPF1P55201 1214 aaPredicted RBP12.37□□□□□ -0.43
BEND3-202ENST00000429433 MAP3K11Q16584 847 aa12.37□□□□□ -0.43
BEND3-202ENST00000429433 FYCO1Q9BQS8 1478 aa12.37□□□□□ -0.43
BEND3-202ENST00000429433 CCDC148Q8NFR7 591 aa12.37□□□□□ -0.43
BEND3-202ENST00000429433 SIL1Q9H173 461 aa12.37□□□□□ -0.43
BEND3-202ENST00000429433 PRDM2Q13029 1718 aa12.37□□□□□ -0.43
BEND3-202ENST00000429433 PLCD4Q9BRC7 762 aa12.37□□□□□ -0.43
BEND3-202ENST00000429433 PLEKHH1Q9ULM0 1364 aa12.36□□□□□ -0.43
BEND3-202ENST00000429433 PPFIA3O75145 1194 aa12.36□□□□□ -0.43
BEND3-202ENST00000429433 ATF7IPQ6VMQ6 1270 aa12.36□□□□□ -0.43
BEND3-202ENST00000429433 CRACR2AQ9BSW2 395 aa12.36□□□□□ -0.43
BEND3-202ENST00000429433 CHD1LQ86WJ1 897 aa12.36□□□□□ -0.43
BEND3-202ENST00000429433 GIMAP7Q8NHV1 300 aa12.36□□□□□ -0.43
BEND3-202ENST00000429433 KIF18AQ8NI77 898 aa12.36□□□□□ -0.43
BEND3-202ENST00000429433 PNISRQ8TF01 805 aaKnown RBP12.36□□□□□ -0.43
BEND3-202ENST00000429433 CCDC102AQ96A19 550 aa12.36□□□□□ -0.43
BEND3-202ENST00000429433 BLOC1S2Q6QNY1 142 aa12.36□□□□□ -0.43
BEND3-202ENST00000429433 RPAP2Q8IXW5 612 aaPredicted RBP12.36□□□□□ -0.43
BEND3-202ENST00000429433 RBM33Q96EV2 1170 aaKnown RBP12.36□□□□□ -0.43
BEND3-202ENST00000429433 HFM1A2PYH4 1435 aa12.36□□□□□ -0.43
BEND3-202ENST00000429433 EPB41L2O43491 1005 aaKnown RBP12.35□□□□□ -0.43
BEND3-202ENST00000429433 SMARCA5O60264 1052 aaPredicted RBP12.35□□□□□ -0.43
BEND3-202ENST00000429433 PTPN14Q15678 1187 aa12.35□□□□□ -0.43
BEND3-202ENST00000429433 ARHGAP29Q52LW3 1261 aa12.35□□□□□ -0.43
BEND3-202ENST00000429433 ZSCAN25Q6NSZ9 544 aa12.35□□□□□ -0.43
BEND3-202ENST00000429433 NACAP1Q9BZK3 213 aa12.35□□□□□ -0.43
BEND3-202ENST00000429433 CTNNA3Q9UI47 895 aa12.35□□□□□ -0.43
BEND3-202ENST00000429433 KIF21BO75037 1637 aa12.35□□□□□ -0.43
BEND3-202ENST00000429433 RAD54L2Q9Y4B4 1467 aa12.35□□□□□ -0.43
BEND3-202ENST00000429433 ANKRD50Q9ULJ7 1429 aa12.35□□□□□ -0.43
BEND3-202ENST00000429433 POTEB2H3BUK9 544 aa12.35□□□□□ -0.43
BEND3-202ENST00000429433 KRT18P05783 430 aaKnown RBP12.35□□□□□ -0.43
BEND3-202ENST00000429433 CCDC158Q5M9N0 1113 aa12.35□□□□□ -0.43
BEND3-202ENST00000429433 WASF1Q92558 559 aa12.35□□□□□ -0.43
BEND3-202ENST00000429433 DNAJC2Q99543 621 aaKnown RBP12.35□□□□□ -0.43
BEND3-202ENST00000429433 SFPQP23246 707 aaKnown RBP eCLIP12.35□□□□□ -0.43
BEND3-202ENST00000429433 ERICH4A6NGS2 130 aa12.34□□□□□ -0.43
BEND3-202ENST00000429433 ENOX2Q16206 610 aaKnown RBP12.34□□□□□ -0.43
BEND3-202ENST00000429433 IMMTQ16891 758 aaKnown RBP12.34□□□□□ -0.43
BEND3-202ENST00000429433 TRERF1Q96PN7 1200 aa12.34□□□□□ -0.43
BEND3-202ENST00000429433 PTPRGP23470 1445 aa12.34□□□□□ -0.43
BEND3-202ENST00000429433 PRKAR2BP31323 418 aa12.34□□□□□ -0.43
BEND3-202ENST00000429433 CCDC57Q2TAC2 916 aa12.34□□□□□ -0.43
BEND3-202ENST00000429433 MICALCLQ6ZW33 695 aa12.34□□□□□ -0.43
BEND3-202ENST00000429433 TAF4BQ92750 862 aa12.34□□□□□ -0.43
BEND3-202ENST00000429433 DYDC1Q8WWB3 177 aa12.33□□□□□ -0.44
BEND3-202ENST00000429433 SCAND2PQ9GZW5 306 aaPredicted RBP12.33□□□□□ -0.44
BEND3-202ENST00000429433 SLC26A8Q96RN1 970 aa12.33□□□□□ -0.44
BEND3-202ENST00000429433 SPINK5Q9NQ38 1064 aaPredicted RBP12.33□□□□□ -0.44
BEND3-202ENST00000429433 PDRG1Q9NUG6 133 aa12.33□□□□□ -0.44
BEND3-202ENST00000429433 PSME1Q06323 249 aa12.33□□□□□ -0.44
BEND3-202ENST00000429433 CAMK4Q16566 473 aa12.33□□□□□ -0.44
BEND3-202ENST00000429433 JAKMIP3Q5VZ66 844 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms